Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
TTC9CQ8N5M4 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
TTC9CQ8N5M4 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.46□□□□□ -1.85
TTC9CQ8N5M4 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
TTC9CQ8N5M4 RAD17P1-201ENST00000418130 2042 ntBASIC3.46□□□□□ -1.86
TTC9CQ8N5M4 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
TTC9CQ8N5M4 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
TTC9CQ8N5M4 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
TTC9CQ8N5M4 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.46□□□□□ -1.86
TTC9CQ8N5M4 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
TTC9CQ8N5M4 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
TTC9CQ8N5M4 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.46□□□□□ -1.86
TTC9CQ8N5M4 AC011155.1-201ENST00000316512 456 ntBASIC3.46□□□□□ -1.86
TTC9CQ8N5M4 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
TTC9CQ8N5M4 AL450992.3-201ENST00000413192 568 ntBASIC3.46□□□□□ -1.86
TTC9CQ8N5M4 AC119751.6-201ENST00000416712 186 ntBASIC3.46□□□□□ -1.86
TTC9CQ8N5M4 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC3.46□□□□□ -1.86
TTC9CQ8N5M4 AL356387.2-201ENST00000422272 243 ntBASIC3.46□□□□□ -1.86
TTC9CQ8N5M4 EIF4A2P4-201ENST00000458691 1196 ntBASIC3.46□□□□□ -1.86
TTC9CQ8N5M4 AC098583.1-201ENST00000480875 255 ntBASIC3.46□□□□□ -1.86
TTC9CQ8N5M4 RN7SL205P-201ENST00000490174 284 ntBASIC3.46□□□□□ -1.86
TTC9CQ8N5M4 AC112184.1-201ENST00000505179 312 ntBASIC3.46□□□□□ -1.86
TTC9CQ8N5M4 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.46□□□□□ -1.86
TTC9CQ8N5M4 ATP1B1P1-201ENST00000509767 915 ntBASIC3.46□□□□□ -1.86
TTC9CQ8N5M4 AC015795.1-201ENST00000513669 327 ntBASIC3.46□□□□□ -1.86
TTC9CQ8N5M4 RN7SKP92-201ENST00000517266 244 ntBASIC3.46□□□□□ -1.86
TTC9CQ8N5M4 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC3.46□□□□□ -1.86
TTC9CQ8N5M4 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.46□□□□□ -1.86
TTC9CQ8N5M4 PHBP17-201ENST00000528576 541 ntBASIC3.46□□□□□ -1.86
TTC9CQ8N5M4 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.46□□□□□ -1.86
TTC9CQ8N5M4 RFPL1S-203ENST00000539579 330 ntBASIC3.46□□□□□ -1.86
TTC9CQ8N5M4 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC3.46□□□□□ -1.86
TTC9CQ8N5M4 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC3.46□□□□□ -1.86
TTC9CQ8N5M4 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC3.46□□□□□ -1.86
TTC9CQ8N5M4 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC3.46□□□□□ -1.86
TTC9CQ8N5M4 AC002044.3-201ENST00000623314 541 ntBASIC3.46□□□□□ -1.86
TTC9CQ8N5M4 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.46□□□□□ -1.86
TTC9CQ8N5M4 HSPA8P17-201ENST00000427029 1382 ntBASIC3.46□□□□□ -1.86
TTC9CQ8N5M4 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
TTC9CQ8N5M4 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
TTC9CQ8N5M4 AC012618.3-205ENST00000637896 1496 ntBASIC3.46□□□□□ -1.86
TTC9CQ8N5M4 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
TTC9CQ8N5M4 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.46□□□□□ -1.86
TTC9CQ8N5M4 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.46□□□□□ -1.86
TTC9CQ8N5M4 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
TTC9CQ8N5M4 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
TTC9CQ8N5M4 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.45□□□□□ -1.86
TTC9CQ8N5M4 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
TTC9CQ8N5M4 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
TTC9CQ8N5M4 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.45□□□□□ -1.86
TTC9CQ8N5M4 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC3.45□□□□□ -1.86
TTC9CQ8N5M4 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
TTC9CQ8N5M4 AC008725.1-201ENST00000605123 2263 ntBASIC3.45□□□□□ -1.86
TTC9CQ8N5M4 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.45□□□□□ -1.86
TTC9CQ8N5M4 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
TTC9CQ8N5M4 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
TTC9CQ8N5M4 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
TTC9CQ8N5M4 RNU1-15P-201ENST00000353977 144 ntBASIC3.45□□□□□ -1.86
TTC9CQ8N5M4 RN7SKP44-201ENST00000363602 316 ntBASIC3.45□□□□□ -1.86
TTC9CQ8N5M4 RNU1-130P-201ENST00000363930 160 ntBASIC3.45□□□□□ -1.86
TTC9CQ8N5M4 SNORD74.4-201ENST00000364129 80 ntBASIC3.45□□□□□ -1.86
TTC9CQ8N5M4 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.45□□□□□ -1.86
TTC9CQ8N5M4 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.45□□□□□ -1.86
TTC9CQ8N5M4 MIR129-1-201ENST00000384972 72 ntBASIC3.45□□□□□ -1.86
TTC9CQ8N5M4 VN1R8P-201ENST00000407739 893 ntBASIC3.45□□□□□ -1.86
TTC9CQ8N5M4 GSTM3P2-201ENST00000412746 530 ntBASIC3.45□□□□□ -1.86
TTC9CQ8N5M4 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.45□□□□□ -1.86
TTC9CQ8N5M4 SNRPFP1-201ENST00000414761 252 ntBASIC3.45□□□□□ -1.86
TTC9CQ8N5M4 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC3.45□□□□□ -1.86
TTC9CQ8N5M4 RBMY1KP-201ENST00000423480 476 ntBASIC3.45□□□□□ -1.86
TTC9CQ8N5M4 EIF1P3-201ENST00000423841 334 ntBASIC3.45□□□□□ -1.86
TTC9CQ8N5M4 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.45□□□□□ -1.86
TTC9CQ8N5M4 RPL23AP1-201ENST00000428990 471 ntBASIC3.45□□□□□ -1.86
TTC9CQ8N5M4 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.45□□□□□ -1.86
TTC9CQ8N5M4 AL138878.2-201ENST00000440581 1241 ntBASIC3.45□□□□□ -1.86
TTC9CQ8N5M4 SNRPFP2-201ENST00000440710 251 ntBASIC3.45□□□□□ -1.86
TTC9CQ8N5M4 AC239809.1-201ENST00000450470 217 ntBASIC3.45□□□□□ -1.86
TTC9CQ8N5M4 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC3.45□□□□□ -1.86
TTC9CQ8N5M4 DHFRP3-201ENST00000455595 559 ntBASIC3.45□□□□□ -1.86
TTC9CQ8N5M4 RPL23AP72-201ENST00000492447 435 ntBASIC3.45□□□□□ -1.86
TTC9CQ8N5M4 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC3.45□□□□□ -1.86
TTC9CQ8N5M4 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
TTC9CQ8N5M4 RFPL4AP3-201ENST00000515267 345 ntBASIC3.45□□□□□ -1.86
TTC9CQ8N5M4 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC3.45□□□□□ -1.86
TTC9CQ8N5M4 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.45□□□□□ -1.86
TTC9CQ8N5M4 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.45□□□□□ -1.86
TTC9CQ8N5M4 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.45□□□□□ -1.86
TTC9CQ8N5M4 SULT1C2P2-201ENST00000562517 294 ntBASIC3.45□□□□□ -1.86
TTC9CQ8N5M4 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
TTC9CQ8N5M4 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
TTC9CQ8N5M4 AC093765.1-201ENST00000603758 881 ntBASIC3.45□□□□□ -1.86
TTC9CQ8N5M4 AC012409.3-201ENST00000611343 981 ntBASIC3.45□□□□□ -1.86
TTC9CQ8N5M4 AC103858.2-201ENST00000621471 543 ntBASIC3.45□□□□□ -1.86
TTC9CQ8N5M4 AC019278.1-201ENST00000623516 479 ntBASIC3.45□□□□□ -1.86
TTC9CQ8N5M4 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.45□□□□□ -1.86
TTC9CQ8N5M4 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
TTC9CQ8N5M4 ST7-212ENST00000422922 1887 ntTSL 5 BASIC3.45□□□□□ -1.86
TTC9CQ8N5M4 NOL8P1-201ENST00000508336 3529 ntBASIC3.45□□□□□ -1.86
TTC9CQ8N5M4 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.45□□□□□ -1.86
TTC9CQ8N5M4 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms