Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 AL390237.1-201ENST00000404226 1415 ntBASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 AC007996.1-201ENST00000620414 2821 ntBASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 RNU4-75P-201ENST00000364621 146 ntBASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 SNORD116.1-201ENST00000365628 92 ntBASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 AL590084.1-201ENST00000407885 387 ntBASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 MIR1182-201ENST00000408363 97 ntBASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 NPM1P40-201ENST00000412758 733 ntBASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 LINC01881-201ENST00000416103 412 ntBASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 MTCO1P21-201ENST00000416634 589 ntBASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 DPPA2P2-201ENST00000418220 897 ntBASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 C1DP1-201ENST00000426049 402 ntBASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 AC005189.1-201ENST00000431286 310 ntBASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 PRPF38AP2-201ENST00000438179 851 ntBASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 OR52J1P-201ENST00000450596 932 ntBASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 RNU7-125P-201ENST00000458760 62 ntBASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 AC080014.1-201ENST00000496877 1201 ntBASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 HPRT1P2-201ENST00000505250 544 ntBASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 AC026782.2-201ENST00000510845 636 ntBASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 BTF3P13-201ENST00000513224 490 ntBASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 SNORA70.11-201ENST00000515987 138 ntBASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 SNORA70.13-201ENST00000516116 138 ntBASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 OR5AN2P-201ENST00000534535 896 ntBASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 AC209154.1-201ENST00000582156 337 ntBASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 MIR4737-201ENST00000583979 81 ntBASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 AP001269.3-201ENST00000588718 329 ntBASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 AL445423.1-201ENST00000609941 536 ntBASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 Z69908.1-201ENST00000622603 247 ntBASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 AC135068.12-201ENST00000637370 931 ntBASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 CR382285.2-201ENST00000624662 1495 ntBASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SLC44A3Q8N4M1 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SLC44A3Q8N4M1 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.41□□□□□ -1.54
SLC44A3Q8N4M1 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
SLC44A3Q8N4M1 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SLC44A3Q8N4M1 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
SLC44A3Q8N4M1 MFSD8-216ENST00000641147 4009 ntBASIC5.41□□□□□ -1.54
SLC44A3Q8N4M1 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
SLC44A3Q8N4M1 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.41□□□□□ -1.54
SLC44A3Q8N4M1 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
SLC44A3Q8N4M1 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
SLC44A3Q8N4M1 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC5.41□□□□□ -1.54
SLC44A3Q8N4M1 SNORA62-201ENST00000365493 153 ntBASIC5.41□□□□□ -1.54
SLC44A3Q8N4M1 DBIP1-201ENST00000401435 260 ntBASIC5.41□□□□□ -1.54
SLC44A3Q8N4M1 ERHP2-201ENST00000402323 299 ntBASIC5.41□□□□□ -1.54
SLC44A3Q8N4M1 AC233289.1-201ENST00000403700 508 ntBASIC5.41□□□□□ -1.54
SLC44A3Q8N4M1 RNU4-74P-201ENST00000411280 161 ntBASIC5.41□□□□□ -1.54
SLC44A3Q8N4M1 AC019050.1-201ENST00000418508 492 ntBASIC5.41□□□□□ -1.54
SLC44A3Q8N4M1 AL354766.1-201ENST00000423396 542 ntBASIC5.41□□□□□ -1.54
SLC44A3Q8N4M1 AC019178.2-201ENST00000423595 505 ntBASIC5.41□□□□□ -1.54
SLC44A3Q8N4M1 MTND4P20-201ENST00000424125 869 ntBASIC5.41□□□□□ -1.54
SLC44A3Q8N4M1 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.41□□□□□ -1.54
SLC44A3Q8N4M1 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SLC44A3Q8N4M1 TAF9P1-201ENST00000445421 515 ntBASIC5.41□□□□□ -1.54
SLC44A3Q8N4M1 MTND1P1-201ENST00000445453 368 ntBASIC5.41□□□□□ -1.54
SLC44A3Q8N4M1 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.41□□□□□ -1.54
SLC44A3Q8N4M1 AC233982.1-201ENST00000451247 436 ntBASIC5.41□□□□□ -1.54
SLC44A3Q8N4M1 AC097262.1-201ENST00000452559 548 ntBASIC5.41□□□□□ -1.54
SLC44A3Q8N4M1 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms