Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 NPM1P21-201ENST00000513394 762 ntBASIC6.41□□□□□ -1.38
VPS8Q8N3P4 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC6.41□□□□□ -1.38
VPS8Q8N3P4 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC6.41□□□□□ -1.38
VPS8Q8N3P4 AC022968.1-201ENST00000567372 442 ntBASIC6.41□□□□□ -1.38
VPS8Q8N3P4 AC110743.1-201ENST00000584870 478 ntBASIC6.41□□□□□ -1.38
VPS8Q8N3P4 AC024941.1-201ENST00000612250 334 ntBASIC6.41□□□□□ -1.38
VPS8Q8N3P4 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
VPS8Q8N3P4 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.41□□□□□ -1.38
VPS8Q8N3P4 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
VPS8Q8N3P4 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
VPS8Q8N3P4 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
VPS8Q8N3P4 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.4□□□□□ -1.38
VPS8Q8N3P4 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC6.4□□□□□ -1.39
VPS8Q8N3P4 HLA-N-201ENST00000437516 135 ntBASIC6.4□□□□□ -1.39
VPS8Q8N3P4 AC083863.1-201ENST00000438811 231 ntBASIC6.4□□□□□ -1.39
VPS8Q8N3P4 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC6.4□□□□□ -1.39
VPS8Q8N3P4 AC087369.1-201ENST00000520775 996 ntBASIC6.4□□□□□ -1.39
VPS8Q8N3P4 OR5D2P-201ENST00000524390 911 ntBASIC6.4□□□□□ -1.39
VPS8Q8N3P4 OR5M7P-201ENST00000526140 972 ntBASIC6.4□□□□□ -1.39
VPS8Q8N3P4 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC6.4□□□□□ -1.39
VPS8Q8N3P4 AC079171.1-201ENST00000568788 914 ntBASIC6.4□□□□□ -1.39
VPS8Q8N3P4 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
VPS8Q8N3P4 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC6.4□□□□□ -1.39
VPS8Q8N3P4 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC6.4□□□□□ -1.39
VPS8Q8N3P4 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
VPS8Q8N3P4 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
VPS8Q8N3P4 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
VPS8Q8N3P4 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
VPS8Q8N3P4 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
VPS8Q8N3P4 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC6.4□□□□□ -1.39
VPS8Q8N3P4 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC6.39□□□□□ -1.39
VPS8Q8N3P4 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC6.39□□□□□ -1.39
VPS8Q8N3P4 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
VPS8Q8N3P4 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
VPS8Q8N3P4 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
VPS8Q8N3P4 RNA5SP513-201ENST00000364648 118 ntBASIC6.39□□□□□ -1.39
VPS8Q8N3P4 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
VPS8Q8N3P4 SNORA37-201ENST00000384504 129 ntBASIC6.39□□□□□ -1.39
VPS8Q8N3P4 HMGB3P19-201ENST00000403971 560 ntBASIC6.39□□□□□ -1.39
VPS8Q8N3P4 RN7SKP199-201ENST00000410325 305 ntBASIC6.39□□□□□ -1.39
VPS8Q8N3P4 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC6.39□□□□□ -1.39
VPS8Q8N3P4 HPRT1P2-201ENST00000505250 544 ntBASIC6.39□□□□□ -1.39
VPS8Q8N3P4 PPBPP1-201ENST00000510807 373 ntBASIC6.39□□□□□ -1.39
VPS8Q8N3P4 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
VPS8Q8N3P4 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC6.39□□□□□ -1.39
VPS8Q8N3P4 AC112484.5-201ENST00000624189 228 ntBASIC6.39□□□□□ -1.39
VPS8Q8N3P4 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC6.39□□□□□ -1.39
VPS8Q8N3P4 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
VPS8Q8N3P4 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
VPS8Q8N3P4 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC6.38□□□□□ -1.39
VPS8Q8N3P4 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC6.38□□□□□ -1.39
VPS8Q8N3P4 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
VPS8Q8N3P4 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
VPS8Q8N3P4 RNA5SP399-201ENST00000364003 117 ntBASIC6.38□□□□□ -1.39
VPS8Q8N3P4 GSTM3P2-201ENST00000412746 530 ntBASIC6.38□□□□□ -1.39
VPS8Q8N3P4 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC6.38□□□□□ -1.39
VPS8Q8N3P4 FCF1P7-201ENST00000451185 558 ntBASIC6.38□□□□□ -1.39
VPS8Q8N3P4 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC6.38□□□□□ -1.39
VPS8Q8N3P4 AC006499.6-201ENST00000511169 607 ntBASIC6.38□□□□□ -1.39
VPS8Q8N3P4 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC6.38□□□□□ -1.39
VPS8Q8N3P4 OR7M1P-201ENST00000608946 533 ntBASIC6.38□□□□□ -1.39
VPS8Q8N3P4 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC6.38□□□□□ -1.39
VPS8Q8N3P4 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
VPS8Q8N3P4 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
VPS8Q8N3P4 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
VPS8Q8N3P4 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
VPS8Q8N3P4 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC6.38□□□□□ -1.39
VPS8Q8N3P4 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
VPS8Q8N3P4 MARK2P15-201ENST00000432204 2186 ntBASIC6.37□□□□□ -1.39
VPS8Q8N3P4 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
VPS8Q8N3P4 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC6.37□□□□□ -1.39
VPS8Q8N3P4 TCP11X3P-202ENST00000514289 1254 ntBASIC6.37□□□□□ -1.39
VPS8Q8N3P4 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC6.37□□□□□ -1.39
VPS8Q8N3P4 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC6.37□□□□□ -1.39
VPS8Q8N3P4 CYP4A43P-201ENST00000568156 121 ntBASIC6.37□□□□□ -1.39
VPS8Q8N3P4 RPL23AP87-202ENST00000573039 466 ntBASIC6.37□□□□□ -1.39
VPS8Q8N3P4 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC6.37□□□□□ -1.39
VPS8Q8N3P4 MIR6500-201ENST00000622700 86 ntBASIC6.37□□□□□ -1.39
VPS8Q8N3P4 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC6.37□□□□□ -1.39
VPS8Q8N3P4 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
VPS8Q8N3P4 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC6.36□□□□□ -1.39
VPS8Q8N3P4 RNU1-108P-201ENST00000362556 161 ntBASIC6.36□□□□□ -1.39
VPS8Q8N3P4 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
VPS8Q8N3P4 SNX10-203ENST00000409367 746 ntTSL 5 BASIC6.36□□□□□ -1.39
VPS8Q8N3P4 ARL6IP1P2-201ENST00000431356 563 ntBASIC6.36□□□□□ -1.39
VPS8Q8N3P4 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
VPS8Q8N3P4 AC122718.1-201ENST00000439448 744 ntBASIC6.36□□□□□ -1.39
VPS8Q8N3P4 FAM133DP-201ENST00000464802 691 ntBASIC6.36□□□□□ -1.39
VPS8Q8N3P4 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC6.36□□□□□ -1.39
VPS8Q8N3P4 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC6.36□□□□□ -1.39
VPS8Q8N3P4 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC6.36□□□□□ -1.39
VPS8Q8N3P4 AL121834.1-201ENST00000572284 509 ntBASIC6.36□□□□□ -1.39
VPS8Q8N3P4 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC6.36□□□□□ -1.39
VPS8Q8N3P4 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC6.36□□□□□ -1.39
VPS8Q8N3P4 CDRT1-208ENST00000630868 794 ntBASIC6.36□□□□□ -1.39
VPS8Q8N3P4 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
VPS8Q8N3P4 IQCB2P-201ENST00000401788 1633 ntBASIC6.36□□□□□ -1.39
VPS8Q8N3P4 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
VPS8Q8N3P4 MAPK10-372ENST00000641954 3413 ntBASIC6.36□□□□□ -1.39
VPS8Q8N3P4 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms