Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 AC006960.1-201ENST00000419980 153 ntBASIC5.28□□□□□ -1.56
KRT78Q8N1N4 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.28□□□□□ -1.56
KRT78Q8N1N4 BLOC1S2P1-201ENST00000428431 301 ntBASIC5.28□□□□□ -1.56
KRT78Q8N1N4 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.28□□□□□ -1.56
KRT78Q8N1N4 MTND5P25-201ENST00000430499 799 ntBASIC5.28□□□□□ -1.56
KRT78Q8N1N4 RPS6P15-201ENST00000431996 751 ntBASIC5.28□□□□□ -1.56
KRT78Q8N1N4 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.28□□□□□ -1.56
KRT78Q8N1N4 RPL12P17-201ENST00000432393 498 ntBASIC5.28□□□□□ -1.56
KRT78Q8N1N4 NDUFB4P8-201ENST00000435351 367 ntBASIC5.28□□□□□ -1.56
KRT78Q8N1N4 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC5.28□□□□□ -1.56
KRT78Q8N1N4 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.28□□□□□ -1.56
KRT78Q8N1N4 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC5.28□□□□□ -1.56
KRT78Q8N1N4 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC5.28□□□□□ -1.56
KRT78Q8N1N4 Z99714.1-201ENST00000450463 807 ntBASIC5.28□□□□□ -1.56
KRT78Q8N1N4 YWHAEP1-201ENST00000453697 763 ntBASIC5.28□□□□□ -1.56
KRT78Q8N1N4 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.28□□□□□ -1.56
KRT78Q8N1N4 AC093166.2-201ENST00000455969 1017 ntBASIC5.28□□□□□ -1.56
KRT78Q8N1N4 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.28□□□□□ -1.56
KRT78Q8N1N4 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC5.28□□□□□ -1.56
KRT78Q8N1N4 CCDC75P1-201ENST00000469247 791 ntBASIC5.28□□□□□ -1.56
KRT78Q8N1N4 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC5.28□□□□□ -1.56
KRT78Q8N1N4 MTND4LP31-201ENST00000514859 294 ntBASIC5.28□□□□□ -1.56
KRT78Q8N1N4 RNU6-941P-201ENST00000516346 108 ntBASIC5.28□□□□□ -1.56
KRT78Q8N1N4 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.28□□□□□ -1.56
KRT78Q8N1N4 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC5.28□□□□□ -1.56
KRT78Q8N1N4 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.28□□□□□ -1.56
KRT78Q8N1N4 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC5.28□□□□□ -1.56
KRT78Q8N1N4 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.28□□□□□ -1.56
KRT78Q8N1N4 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.28□□□□□ -1.56
KRT78Q8N1N4 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC5.28□□□□□ -1.56
KRT78Q8N1N4 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
KRT78Q8N1N4 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC5.28□□□□□ -1.56
KRT78Q8N1N4 AP005403.1-201ENST00000579720 229 ntBASIC5.28□□□□□ -1.56
KRT78Q8N1N4 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC5.28□□□□□ -1.56
KRT78Q8N1N4 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC5.28□□□□□ -1.56
KRT78Q8N1N4 AC006272.2-201ENST00000594725 163 ntBASIC5.28□□□□□ -1.56
KRT78Q8N1N4 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.28□□□□□ -1.56
KRT78Q8N1N4 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.28□□□□□ -1.56
KRT78Q8N1N4 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
KRT78Q8N1N4 DPRXP5-201ENST00000604662 539 ntBASIC5.28□□□□□ -1.56
KRT78Q8N1N4 AC092954.1-201ENST00000609121 445 ntBASIC5.28□□□□□ -1.56
KRT78Q8N1N4 AC009163.6-201ENST00000612367 342 ntBASIC5.28□□□□□ -1.56
KRT78Q8N1N4 AC090246.1-201ENST00000616499 426 ntBASIC5.28□□□□□ -1.56
KRT78Q8N1N4 Z99129.2-201ENST00000619967 314 ntBASIC5.28□□□□□ -1.56
KRT78Q8N1N4 AL691477.1-201ENST00000624398 162 ntBASIC5.28□□□□□ -1.56
KRT78Q8N1N4 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.28□□□□□ -1.56
KRT78Q8N1N4 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
KRT78Q8N1N4 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.28□□□□□ -1.56
KRT78Q8N1N4 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
KRT78Q8N1N4 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.28□□□□□ -1.56
KRT78Q8N1N4 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
KRT78Q8N1N4 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
KRT78Q8N1N4 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
KRT78Q8N1N4 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
KRT78Q8N1N4 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
KRT78Q8N1N4 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.28□□□□□ -1.56
KRT78Q8N1N4 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
KRT78Q8N1N4 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
KRT78Q8N1N4 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
KRT78Q8N1N4 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
KRT78Q8N1N4 RNU6-582P-201ENST00000362989 107 ntBASIC5.27□□□□□ -1.57
KRT78Q8N1N4 RN7SKP145-201ENST00000363291 303 ntBASIC5.27□□□□□ -1.57
KRT78Q8N1N4 Y_RNA.192-201ENST00000363977 102 ntBASIC5.27□□□□□ -1.57
KRT78Q8N1N4 RNA5SP187-201ENST00000384400 119 ntBASIC5.27□□□□□ -1.57
KRT78Q8N1N4 RNU6-83P-201ENST00000384568 112 ntBASIC5.27□□□□□ -1.57
KRT78Q8N1N4 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
KRT78Q8N1N4 AL139098.1-201ENST00000407291 389 ntBASIC5.27□□□□□ -1.57
KRT78Q8N1N4 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC5.27□□□□□ -1.57
KRT78Q8N1N4 RN7SKP286-201ENST00000410894 299 ntBASIC5.27□□□□□ -1.57
KRT78Q8N1N4 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC5.27□□□□□ -1.57
KRT78Q8N1N4 AKR1B10P1-201ENST00000425765 942 ntBASIC5.27□□□□□ -1.57
KRT78Q8N1N4 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.27□□□□□ -1.57
KRT78Q8N1N4 RPS29P14-201ENST00000431518 171 ntBASIC5.27□□□□□ -1.57
KRT78Q8N1N4 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.27□□□□□ -1.57
KRT78Q8N1N4 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC5.27□□□□□ -1.57
KRT78Q8N1N4 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC5.27□□□□□ -1.57
KRT78Q8N1N4 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC5.27□□□□□ -1.57
KRT78Q8N1N4 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.27□□□□□ -1.57
KRT78Q8N1N4 AL161636.2-201ENST00000445179 927 ntBASIC5.27□□□□□ -1.57
KRT78Q8N1N4 MTCO2P25-201ENST00000447065 681 ntBASIC5.27□□□□□ -1.57
KRT78Q8N1N4 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.27□□□□□ -1.57
KRT78Q8N1N4 COX6CP18-201ENST00000448769 222 ntBASIC5.27□□□□□ -1.57
KRT78Q8N1N4 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC5.27□□□□□ -1.57
KRT78Q8N1N4 VN1R40P-201ENST00000455196 941 ntBASIC5.27□□□□□ -1.57
KRT78Q8N1N4 AL122001.1-201ENST00000457027 370 ntBASIC5.27□□□□□ -1.57
KRT78Q8N1N4 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
KRT78Q8N1N4 UBA52P3-201ENST00000491303 382 ntBASIC5.27□□□□□ -1.57
KRT78Q8N1N4 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.27□□□□□ -1.57
KRT78Q8N1N4 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC5.27□□□□□ -1.57
KRT78Q8N1N4 AC116353.3-201ENST00000511215 249 ntBASIC5.27□□□□□ -1.57
KRT78Q8N1N4 AC091912.1-201ENST00000511351 248 ntBASIC5.27□□□□□ -1.57
KRT78Q8N1N4 MTND6P2-201ENST00000512226 524 ntBASIC5.27□□□□□ -1.57
KRT78Q8N1N4 NDUFB4P12-201ENST00000513465 390 ntBASIC5.27□□□□□ -1.57
KRT78Q8N1N4 SCARNA16.4-201ENST00000516956 187 ntBASIC5.27□□□□□ -1.57
KRT78Q8N1N4 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.27□□□□□ -1.57
KRT78Q8N1N4 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
KRT78Q8N1N4 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.27□□□□□ -1.57
KRT78Q8N1N4 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.27□□□□□ -1.57
KRT78Q8N1N4 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC5.27□□□□□ -1.57
KRT78Q8N1N4 AP000619.3-201ENST00000535634 1127 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms