Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.88□□□□□ -1.63
CCDC65Q8IXS2 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC65Q8IXS2 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC65Q8IXS2 RNU6-1331P-201ENST00000363658 106 ntBASIC4.88□□□□□ -1.63
CCDC65Q8IXS2 RNU1-130P-201ENST00000363930 160 ntBASIC4.88□□□□□ -1.63
CCDC65Q8IXS2 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC65Q8IXS2 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC65Q8IXS2 RNU6-398P-201ENST00000384143 109 ntBASIC4.88□□□□□ -1.63
CCDC65Q8IXS2 MIR192-201ENST00000384915 110 ntBASIC4.88□□□□□ -1.63
CCDC65Q8IXS2 CYB5AP4-201ENST00000396692 399 ntBASIC4.88□□□□□ -1.63
CCDC65Q8IXS2 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC65Q8IXS2 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC65Q8IXS2 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.88□□□□□ -1.63
CCDC65Q8IXS2 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.88□□□□□ -1.63
CCDC65Q8IXS2 RPL23AP1-201ENST00000428990 471 ntBASIC4.88□□□□□ -1.63
CCDC65Q8IXS2 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.88□□□□□ -1.63
CCDC65Q8IXS2 NDUFS5P3-201ENST00000450668 321 ntBASIC4.88□□□□□ -1.63
CCDC65Q8IXS2 AC243772.1-201ENST00000451620 410 ntBASIC4.88□□□□□ -1.63
CCDC65Q8IXS2 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC65Q8IXS2 AK3P4-201ENST00000504283 583 ntBASIC4.88□□□□□ -1.63
CCDC65Q8IXS2 ATP1B1P1-201ENST00000509767 915 ntBASIC4.88□□□□□ -1.63
CCDC65Q8IXS2 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.88□□□□□ -1.63
CCDC65Q8IXS2 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.88□□□□□ -1.63
CCDC65Q8IXS2 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.88□□□□□ -1.63
CCDC65Q8IXS2 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC65Q8IXS2 MIR4443-201ENST00000585052 53 ntBASIC4.88□□□□□ -1.63
CCDC65Q8IXS2 AC020915.5-201ENST00000596836 964 ntBASIC4.88□□□□□ -1.63
CCDC65Q8IXS2 RPL12P25-202ENST00000598100 674 ntBASIC4.88□□□□□ -1.63
CCDC65Q8IXS2 AC079587.1-201ENST00000603846 277 ntBASIC4.88□□□□□ -1.63
CCDC65Q8IXS2 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC65Q8IXS2 NF1P10-201ENST00000613227 742 ntBASIC4.88□□□□□ -1.63
CCDC65Q8IXS2 SNX18P1Y-201ENST00000616231 511 ntBASIC4.88□□□□□ -1.63
CCDC65Q8IXS2 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC65Q8IXS2 AL451142.2-201ENST00000429076 2090 ntBASIC4.88□□□□□ -1.63
CCDC65Q8IXS2 USP9YP4-201ENST00000424401 1745 ntBASIC4.88□□□□□ -1.63
CCDC65Q8IXS2 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC65Q8IXS2 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC65Q8IXS2 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
CCDC65Q8IXS2 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC65Q8IXS2 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC65Q8IXS2 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC65Q8IXS2 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC65Q8IXS2 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.87□□□□□ -1.63
CCDC65Q8IXS2 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC65Q8IXS2 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CCDC65Q8IXS2 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC65Q8IXS2 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CCDC65Q8IXS2 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC65Q8IXS2 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.87□□□□□ -1.63
CCDC65Q8IXS2 HSPD1P11-201ENST00000508643 1702 ntBASIC4.87□□□□□ -1.63
CCDC65Q8IXS2 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC65Q8IXS2 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CCDC65Q8IXS2 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC4.87□□□□□ -1.63
CCDC65Q8IXS2 GCNT6-201ENST00000379591 934 ntBASIC4.87□□□□□ -1.63
CCDC65Q8IXS2 RNA5SP332-201ENST00000391063 115 ntBASIC4.87□□□□□ -1.63
CCDC65Q8IXS2 AC093719.1-202ENST00000392735 373 ntBASIC4.87□□□□□ -1.63
CCDC65Q8IXS2 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC65Q8IXS2 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC4.87□□□□□ -1.63
CCDC65Q8IXS2 TMSB10P2-201ENST00000416049 131 ntBASIC4.87□□□□□ -1.63
CCDC65Q8IXS2 AL356387.2-201ENST00000422272 243 ntBASIC4.87□□□□□ -1.63
CCDC65Q8IXS2 AL158073.1-201ENST00000426848 1104 ntBASIC4.87□□□□□ -1.63
CCDC65Q8IXS2 RPS26P47-201ENST00000427219 348 ntBASIC4.87□□□□□ -1.63
CCDC65Q8IXS2 AC073335.1-201ENST00000427776 363 ntBASIC4.87□□□□□ -1.63
CCDC65Q8IXS2 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.87□□□□□ -1.63
CCDC65Q8IXS2 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.87□□□□□ -1.63
CCDC65Q8IXS2 RPEP2-201ENST00000432149 701 ntBASIC4.87□□□□□ -1.63
CCDC65Q8IXS2 AL132765.1-201ENST00000434165 553 ntBASIC4.87□□□□□ -1.63
CCDC65Q8IXS2 RPS20P1-201ENST00000434853 354 ntBASIC4.87□□□□□ -1.63
CCDC65Q8IXS2 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.87□□□□□ -1.63
CCDC65Q8IXS2 AC069285.2-201ENST00000440210 275 ntBASIC4.87□□□□□ -1.63
CCDC65Q8IXS2 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.87□□□□□ -1.63
CCDC65Q8IXS2 DHFRP3-201ENST00000455595 559 ntBASIC4.87□□□□□ -1.63
CCDC65Q8IXS2 MTND2P28-201ENST00000457540 1044 ntBASIC4.87□□□□□ -1.63
CCDC65Q8IXS2 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.87□□□□□ -1.63
CCDC65Q8IXS2 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.87□□□□□ -1.63
CCDC65Q8IXS2 AC007686.1-201ENST00000488511 463 ntBASIC4.87□□□□□ -1.63
CCDC65Q8IXS2 AC093720.1-201ENST00000505681 714 ntBASIC4.87□□□□□ -1.63
CCDC65Q8IXS2 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
CCDC65Q8IXS2 AC008694.2-201ENST00000517591 306 ntBASIC4.87□□□□□ -1.63
CCDC65Q8IXS2 OR5AN2P-201ENST00000534535 896 ntBASIC4.87□□□□□ -1.63
CCDC65Q8IXS2 AC137768.1-201ENST00000549998 553 ntBASIC4.87□□□□□ -1.63
CCDC65Q8IXS2 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.87□□□□□ -1.63
CCDC65Q8IXS2 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.87□□□□□ -1.63
CCDC65Q8IXS2 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.87□□□□□ -1.63
CCDC65Q8IXS2 AC067838.1-201ENST00000606064 577 ntBASIC4.87□□□□□ -1.63
CCDC65Q8IXS2 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CCDC65Q8IXS2 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC65Q8IXS2 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC65Q8IXS2 OR11H5P-202ENST00000641612 1325 ntBASIC4.87□□□□□ -1.63
CCDC65Q8IXS2 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
CCDC65Q8IXS2 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC65Q8IXS2 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC65Q8IXS2 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC65Q8IXS2 MFSD8-216ENST00000641147 4009 ntBASIC4.87□□□□□ -1.63
CCDC65Q8IXS2 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.87□□□□□ -1.63
CCDC65Q8IXS2 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC65Q8IXS2 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.86□□□□□ -1.63
CCDC65Q8IXS2 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC65Q8IXS2 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
CCDC65Q8IXS2 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms