Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 AC004520.1-201ENST00000608362 1413 ntBASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM48Q8IWZ4 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
TRIM48Q8IWZ4 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM48Q8IWZ4 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
TRIM48Q8IWZ4 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.73□□□□□ -1.49
TRIM48Q8IWZ4 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM48Q8IWZ4 AL079343.1-201ENST00000572358 1771 ntBASIC5.73□□□□□ -1.49
TRIM48Q8IWZ4 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM48Q8IWZ4 AC011447.7-201ENST00000624228 1590 ntBASIC5.73□□□□□ -1.49
TRIM48Q8IWZ4 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM48Q8IWZ4 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM48Q8IWZ4 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM48Q8IWZ4 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
TRIM48Q8IWZ4 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
TRIM48Q8IWZ4 RNU1-150P-201ENST00000362491 162 ntBASIC5.73□□□□□ -1.49
TRIM48Q8IWZ4 RNU6-1300P-201ENST00000391046 108 ntBASIC5.73□□□□□ -1.49
TRIM48Q8IWZ4 SNORA17A-201ENST00000391185 133 ntBASIC5.73□□□□□ -1.49
TRIM48Q8IWZ4 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.73□□□□□ -1.49
TRIM48Q8IWZ4 AL513325.1-201ENST00000417716 1034 ntBASIC5.73□□□□□ -1.49
TRIM48Q8IWZ4 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC5.73□□□□□ -1.49
TRIM48Q8IWZ4 AC104843.2-201ENST00000427666 297 ntBASIC5.73□□□□□ -1.49
TRIM48Q8IWZ4 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC5.73□□□□□ -1.49
TRIM48Q8IWZ4 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.73□□□□□ -1.49
TRIM48Q8IWZ4 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.73□□□□□ -1.49
TRIM48Q8IWZ4 UBE2V1P5-201ENST00000440070 405 ntBASIC5.73□□□□□ -1.49
TRIM48Q8IWZ4 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.73□□□□□ -1.49
TRIM48Q8IWZ4 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.73□□□□□ -1.49
TRIM48Q8IWZ4 RPL36AP39-201ENST00000445859 318 ntBASIC5.73□□□□□ -1.49
TRIM48Q8IWZ4 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.73□□□□□ -1.49
TRIM48Q8IWZ4 MTCO3P11-201ENST00000455103 774 ntBASIC5.73□□□□□ -1.49
TRIM48Q8IWZ4 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.73□□□□□ -1.49
TRIM48Q8IWZ4 RNA5SP269-201ENST00000459032 137 ntBASIC5.73□□□□□ -1.49
TRIM48Q8IWZ4 PPIAP19-201ENST00000486414 492 ntBASIC5.73□□□□□ -1.49
TRIM48Q8IWZ4 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC5.73□□□□□ -1.49
TRIM48Q8IWZ4 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC5.73□□□□□ -1.49
TRIM48Q8IWZ4 AC109481.1-201ENST00000509173 282 ntBASIC5.73□□□□□ -1.49
TRIM48Q8IWZ4 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM48Q8IWZ4 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC5.73□□□□□ -1.49
TRIM48Q8IWZ4 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.73□□□□□ -1.49
TRIM48Q8IWZ4 AC138832.1-201ENST00000522871 556 ntBASIC5.73□□□□□ -1.49
TRIM48Q8IWZ4 HMGN2P36-201ENST00000529541 409 ntBASIC5.73□□□□□ -1.49
TRIM48Q8IWZ4 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.73□□□□□ -1.49
TRIM48Q8IWZ4 AC091078.2-201ENST00000557145 559 ntBASIC5.73□□□□□ -1.49
TRIM48Q8IWZ4 MIR3614-201ENST00000581261 86 ntBASIC5.73□□□□□ -1.49
TRIM48Q8IWZ4 MIR4260-201ENST00000583107 67 ntBASIC5.73□□□□□ -1.49
TRIM48Q8IWZ4 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.73□□□□□ -1.49
TRIM48Q8IWZ4 MIR548AB-201ENST00000584917 84 ntBASIC5.73□□□□□ -1.49
TRIM48Q8IWZ4 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.73□□□□□ -1.49
TRIM48Q8IWZ4 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.73□□□□□ -1.49
TRIM48Q8IWZ4 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.73□□□□□ -1.49
TRIM48Q8IWZ4 AC091946.2-201ENST00000606105 291 ntBASIC5.73□□□□□ -1.49
TRIM48Q8IWZ4 AC024560.3-201ENST00000608482 349 ntBASIC5.73□□□□□ -1.49
TRIM48Q8IWZ4 AC138932.5-201ENST00000617759 563 ntBASIC5.73□□□□□ -1.49
TRIM48Q8IWZ4 AC005609.4-201ENST00000625071 447 ntBASIC5.73□□□□□ -1.49
TRIM48Q8IWZ4 SNORA17.5-201ENST00000630429 132 ntBASIC5.73□□□□□ -1.49
TRIM48Q8IWZ4 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.73□□□□□ -1.49
TRIM48Q8IWZ4 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
TRIM48Q8IWZ4 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM48Q8IWZ4 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.73□□□□□ -1.49
TRIM48Q8IWZ4 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
TRIM48Q8IWZ4 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM48Q8IWZ4 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM48Q8IWZ4 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM48Q8IWZ4 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 RNU6-1042P-201ENST00000384204 107 ntBASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 AC007066.1-201ENST00000392902 381 ntBASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 OR7E101P-201ENST00000400428 513 ntBASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 NCSTNP1-201ENST00000406229 144 ntBASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 OR2AT2P-201ENST00000413438 905 ntBASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 OR51A3P-201ENST00000413596 924 ntBASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 RPL23AP39-201ENST00000415533 405 ntBASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 SLC44A3-AS1-205ENST00000424505 612 ntBASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 RPL21P110-201ENST00000433345 446 ntBASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 MTND1P28-201ENST00000435623 950 ntBASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 PPIAP17-201ENST00000438507 471 ntBASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 AL512286.1-201ENST00000439244 400 ntBASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 AL161636.2-201ENST00000445179 927 ntBASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 SSXP1-201ENST00000453640 473 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms