Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AC092821.2-201ENST00000545710 2042 ntBASIC6.66□□□□□ -1.34
NPAS4Q8IUM7 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
NPAS4Q8IUM7 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 BX322650.1-201ENST00000332359 2143 ntBASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 RNU6-984P-201ENST00000363236 109 ntBASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 RNU1-74P-201ENST00000384108 171 ntBASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 DSTNP4-201ENST00000399472 474 ntBASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 RPS3AP23-201ENST00000401762 784 ntBASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 MIR320C1-201ENST00000408566 88 ntBASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 RN7SKP286-201ENST00000410894 299 ntBASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 ELOCP10-201ENST00000440624 327 ntBASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 MTND2P24-201ENST00000453434 806 ntBASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 RPL10P17-201ENST00000453852 316 ntBASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 AC091564.1-201ENST00000464563 479 ntBASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 AC017015.1-201ENST00000477387 286 ntBASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 AC126182.1-201ENST00000478134 357 ntBASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 POU5F1P7-201ENST00000508759 541 ntBASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 CR383656.6-201ENST00000550518 394 ntBASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 LSM6P2-201ENST00000552208 177 ntBASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 EIF5A2P1-201ENST00000564027 460 ntBASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 AC018558.5-201ENST00000565840 952 ntBASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 AC141257.3-201ENST00000572906 215 ntBASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 AC233702.7-202ENST00000582941 211 ntBASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 AC025449.1-201ENST00000603896 529 ntBASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 ELOCP34-201ENST00000604436 327 ntBASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 AC108479.2-201ENST00000617314 601 ntBASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 AC007742.2-201ENST00000618226 398 ntBASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 LCOR-201ENST00000286067 4542 ntBASIC6.65□□□□□ -1.34
NPAS4Q8IUM7 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
NPAS4Q8IUM7 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
NPAS4Q8IUM7 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.65□□□□□ -1.35
NPAS4Q8IUM7 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC6.65□□□□□ -1.35
NPAS4Q8IUM7 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.65□□□□□ -1.35
NPAS4Q8IUM7 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.65□□□□□ -1.35
NPAS4Q8IUM7 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.35
NPAS4Q8IUM7 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
NPAS4Q8IUM7 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
NPAS4Q8IUM7 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.65□□□□□ -1.35
NPAS4Q8IUM7 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
NPAS4Q8IUM7 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
NPAS4Q8IUM7 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
NPAS4Q8IUM7 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
NPAS4Q8IUM7 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.65□□□□□ -1.35
NPAS4Q8IUM7 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
NPAS4Q8IUM7 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms