Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 RSU1P2-202ENST00000437884 485 ntBASIC7.13□□□□□ -1.27
RNF135Q8IUD6 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC7.13□□□□□ -1.27
RNF135Q8IUD6 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC7.13□□□□□ -1.27
RNF135Q8IUD6 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC7.13□□□□□ -1.27
RNF135Q8IUD6 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
RNF135Q8IUD6 RPL7P6-201ENST00000480903 738 ntBASIC7.13□□□□□ -1.27
RNF135Q8IUD6 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC7.13□□□□□ -1.27
RNF135Q8IUD6 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC7.13□□□□□ -1.27
RNF135Q8IUD6 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC7.13□□□□□ -1.27
RNF135Q8IUD6 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC7.13□□□□□ -1.27
RNF135Q8IUD6 AC026470.2-201ENST00000561492 181 ntBASIC7.13□□□□□ -1.27
RNF135Q8IUD6 AC122134.1-201ENST00000565664 1104 ntBASIC7.13□□□□□ -1.27
RNF135Q8IUD6 MIR5186-201ENST00000577504 120 ntBASIC7.13□□□□□ -1.27
RNF135Q8IUD6 MIR3135A-201ENST00000578460 77 ntBASIC7.13□□□□□ -1.27
RNF135Q8IUD6 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC7.13□□□□□ -1.27
RNF135Q8IUD6 AC124916.2-201ENST00000604416 224 ntBASIC7.13□□□□□ -1.27
RNF135Q8IUD6 HNRNPA3P9-201ENST00000604913 979 ntBASIC7.13□□□□□ -1.27
RNF135Q8IUD6 RNU6-87P-201ENST00000607561 108 ntBASIC7.13□□□□□ -1.27
RNF135Q8IUD6 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
RNF135Q8IUD6 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC7.13□□□□□ -1.27
RNF135Q8IUD6 uc_338.9-201ENST00000617424 182 ntBASIC7.13□□□□□ -1.27
RNF135Q8IUD6 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC7.13□□□□□ -1.27
RNF135Q8IUD6 AC130448.2-201ENST00000624082 374 ntBASIC7.13□□□□□ -1.27
RNF135Q8IUD6 CDRT1-208ENST00000630868 794 ntBASIC7.13□□□□□ -1.27
RNF135Q8IUD6 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC7.13□□□□□ -1.27
RNF135Q8IUD6 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC7.13□□□□□ -1.27
RNF135Q8IUD6 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
RNF135Q8IUD6 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC7.13□□□□□ -1.27
RNF135Q8IUD6 SALL4P7-201ENST00000555779 3120 ntBASIC7.13□□□□□ -1.27
RNF135Q8IUD6 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC7.13□□□□□ -1.27
RNF135Q8IUD6 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
RNF135Q8IUD6 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
RNF135Q8IUD6 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
RNF135Q8IUD6 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
RNF135Q8IUD6 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC7.13□□□□□ -1.27
RNF135Q8IUD6 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
RNF135Q8IUD6 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
RNF135Q8IUD6 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC7.13□□□□□ -1.27
RNF135Q8IUD6 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
RNF135Q8IUD6 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RNF135Q8IUD6 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RNF135Q8IUD6 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
RNF135Q8IUD6 OFD1P17-201ENST00000437639 3018 ntBASIC7.12□□□□□ -1.27
RNF135Q8IUD6 AC104966.1-201ENST00000467010 1464 ntBASIC7.12□□□□□ -1.27
RNF135Q8IUD6 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
RNF135Q8IUD6 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RNF135Q8IUD6 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RNF135Q8IUD6 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
RNF135Q8IUD6 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
RNF135Q8IUD6 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RNF135Q8IUD6 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RNF135Q8IUD6 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
RNF135Q8IUD6 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RNF135Q8IUD6 Y_RNA.58-201ENST00000362807 102 ntBASIC7.12□□□□□ -1.27
RNF135Q8IUD6 RNU6-1017P-201ENST00000363613 106 ntBASIC7.12□□□□□ -1.27
RNF135Q8IUD6 Y_RNA.154-201ENST00000363624 102 ntBASIC7.12□□□□□ -1.27
RNF135Q8IUD6 RNY3P1-201ENST00000365085 102 ntBASIC7.12□□□□□ -1.27
RNF135Q8IUD6 RN7SKP69-201ENST00000365390 305 ntBASIC7.12□□□□□ -1.27
RNF135Q8IUD6 RNY3-201ENST00000365484 102 ntBASIC7.12□□□□□ -1.27
RNF135Q8IUD6 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
RNF135Q8IUD6 Y_RNA.490-201ENST00000384413 102 ntBASIC7.12□□□□□ -1.27
RNF135Q8IUD6 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
RNF135Q8IUD6 UBBP1-201ENST00000392399 473 ntBASIC7.12□□□□□ -1.27
RNF135Q8IUD6 RPS20P2-201ENST00000402520 389 ntBASIC7.12□□□□□ -1.27
RNF135Q8IUD6 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC7.12□□□□□ -1.27
RNF135Q8IUD6 AC211486.3-201ENST00000412694 621 ntBASIC7.12□□□□□ -1.27
RNF135Q8IUD6 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC7.12□□□□□ -1.27
RNF135Q8IUD6 MRPS21P5-201ENST00000417885 231 ntBASIC7.12□□□□□ -1.27
RNF135Q8IUD6 GSTA6P-201ENST00000424144 582 ntBASIC7.12□□□□□ -1.27
RNF135Q8IUD6 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC7.12□□□□□ -1.27
RNF135Q8IUD6 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC7.12□□□□□ -1.27
RNF135Q8IUD6 HMGB3P9-201ENST00000441799 583 ntBASIC7.12□□□□□ -1.27
RNF135Q8IUD6 MORF4-201ENST00000447135 971 ntBASIC7.12□□□□□ -1.27
RNF135Q8IUD6 ARPC3P5-201ENST00000448802 534 ntBASIC7.12□□□□□ -1.27
RNF135Q8IUD6 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC7.12□□□□□ -1.27
RNF135Q8IUD6 RNU7-136P-201ENST00000458819 69 ntBASIC7.12□□□□□ -1.27
RNF135Q8IUD6 AC021660.1-201ENST00000465006 554 ntBASIC7.12□□□□□ -1.27
RNF135Q8IUD6 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RNF135Q8IUD6 AC008945.1-201ENST00000505144 499 ntBASIC7.12□□□□□ -1.27
RNF135Q8IUD6 AC109481.1-201ENST00000509173 282 ntBASIC7.12□□□□□ -1.27
RNF135Q8IUD6 AC110792.2-201ENST00000510278 224 ntBASIC7.12□□□□□ -1.27
RNF135Q8IUD6 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC7.12□□□□□ -1.27
RNF135Q8IUD6 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC7.12□□□□□ -1.27
RNF135Q8IUD6 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC7.12□□□□□ -1.27
RNF135Q8IUD6 AC027308.1-201ENST00000517993 110 ntBASIC7.12□□□□□ -1.27
RNF135Q8IUD6 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC7.12□□□□□ -1.27
RNF135Q8IUD6 FAU-203ENST00000525297 355 ntTSL 5 BASIC7.12□□□□□ -1.27
RNF135Q8IUD6 AP003181.2-201ENST00000528941 181 ntBASIC7.12□□□□□ -1.27
RNF135Q8IUD6 AC007537.1-201ENST00000539347 327 ntBASIC7.12□□□□□ -1.27
RNF135Q8IUD6 AC243972.3-201ENST00000539655 198 ntBASIC7.12□□□□□ -1.27
RNF135Q8IUD6 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC7.12□□□□□ -1.27
RNF135Q8IUD6 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC7.12□□□□□ -1.27
RNF135Q8IUD6 AP005212.3-201ENST00000619964 528 ntBASIC7.12□□□□□ -1.27
RNF135Q8IUD6 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC7.12□□□□□ -1.27
RNF135Q8IUD6 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC7.12□□□□□ -1.27
RNF135Q8IUD6 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC7.12□□□□□ -1.27
RNF135Q8IUD6 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC7.12□□□□□ -1.27
RNF135Q8IUD6 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RNF135Q8IUD6 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC7.12□□□□□ -1.27
RNF135Q8IUD6 DLEU2L-201ENST00000371086 3555 ntBASIC7.12□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms