Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.03□□□□□ -1.6
PRPF39Q86UA1 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
PRPF39Q86UA1 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PRPF39Q86UA1 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
PRPF39Q86UA1 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PRPF39Q86UA1 AL118496.1-201ENST00000440201 1812 ntBASIC5.03□□□□□ -1.6
PRPF39Q86UA1 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PRPF39Q86UA1 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
PRPF39Q86UA1 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PRPF39Q86UA1 OR6K3-202ENST00000368146 996 ntBASIC5.03□□□□□ -1.6
PRPF39Q86UA1 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PRPF39Q86UA1 HMGB3P18-201ENST00000406327 590 ntBASIC5.03□□□□□ -1.6
PRPF39Q86UA1 AF186996.5-201ENST00000418098 904 ntBASIC5.03□□□□□ -1.6
PRPF39Q86UA1 OR6C64P-201ENST00000419708 825 ntBASIC5.03□□□□□ -1.6
PRPF39Q86UA1 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PRPF39Q86UA1 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC5.03□□□□□ -1.6
PRPF39Q86UA1 AC073069.1-201ENST00000428657 441 ntBASIC5.03□□□□□ -1.6
PRPF39Q86UA1 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.03□□□□□ -1.6
PRPF39Q86UA1 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.03□□□□□ -1.6
PRPF39Q86UA1 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.03□□□□□ -1.6
PRPF39Q86UA1 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.03□□□□□ -1.6
PRPF39Q86UA1 MTND6P18-201ENST00000439477 513 ntBASIC5.03□□□□□ -1.6
PRPF39Q86UA1 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.03□□□□□ -1.6
PRPF39Q86UA1 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC5.03□□□□□ -1.6
PRPF39Q86UA1 CEACAMP9-201ENST00000442990 513 ntBASIC5.03□□□□□ -1.6
PRPF39Q86UA1 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC5.03□□□□□ -1.6
PRPF39Q86UA1 ARL5AP2-201ENST00000444698 533 ntBASIC5.03□□□□□ -1.6
PRPF39Q86UA1 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.03□□□□□ -1.6
PRPF39Q86UA1 OR52J1P-201ENST00000450596 932 ntBASIC5.03□□□□□ -1.6
PRPF39Q86UA1 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.03□□□□□ -1.6
PRPF39Q86UA1 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
PRPF39Q86UA1 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC5.03□□□□□ -1.6
PRPF39Q86UA1 AC092593.2-201ENST00000513866 913 ntBASIC5.03□□□□□ -1.6
PRPF39Q86UA1 RN7SKP46-201ENST00000515942 234 ntBASIC5.03□□□□□ -1.6
PRPF39Q86UA1 AC113192.3-201ENST00000529152 742 ntBASIC5.03□□□□□ -1.6
PRPF39Q86UA1 HIGD1AP5-201ENST00000529959 259 ntBASIC5.03□□□□□ -1.6
PRPF39Q86UA1 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.03□□□□□ -1.6
PRPF39Q86UA1 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC5.03□□□□□ -1.6
PRPF39Q86UA1 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC5.03□□□□□ -1.6
PRPF39Q86UA1 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
PRPF39Q86UA1 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.03□□□□□ -1.6
PRPF39Q86UA1 AL390726.5-202ENST00000564800 256 ntBASIC5.03□□□□□ -1.6
PRPF39Q86UA1 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.03□□□□□ -1.6
PRPF39Q86UA1 DPRXP4-201ENST00000578053 568 ntBASIC5.03□□□□□ -1.6
PRPF39Q86UA1 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.03□□□□□ -1.6
PRPF39Q86UA1 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.03□□□□□ -1.6
PRPF39Q86UA1 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PRPF39Q86UA1 AC005776.1-201ENST00000603164 290 ntBASIC5.03□□□□□ -1.6
PRPF39Q86UA1 AC104687.2-201ENST00000604442 342 ntBASIC5.03□□□□□ -1.6
PRPF39Q86UA1 AL163051.2-201ENST00000618976 735 ntBASIC5.03□□□□□ -1.6
PRPF39Q86UA1 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.03□□□□□ -1.6
PRPF39Q86UA1 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC5.03□□□□□ -1.6
PRPF39Q86UA1 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PRPF39Q86UA1 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
PRPF39Q86UA1 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PRPF39Q86UA1 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PRPF39Q86UA1 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
PRPF39Q86UA1 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC5.03□□□□□ -1.6
PRPF39Q86UA1 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PRPF39Q86UA1 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.03□□□□□ -1.6
PRPF39Q86UA1 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.03□□□□□ -1.6
PRPF39Q86UA1 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.03□□□□□ -1.6
PRPF39Q86UA1 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.03□□□□□ -1.6
PRPF39Q86UA1 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PRPF39Q86UA1 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PRPF39Q86UA1 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PRPF39Q86UA1 A2MP1-204ENST00000566278 4130 ntBASIC5.02□□□□□ -1.61
PRPF39Q86UA1 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.02□□□□□ -1.61
PRPF39Q86UA1 AL672167.1-205ENST00000641112 3080 ntBASIC5.02□□□□□ -1.61
PRPF39Q86UA1 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PRPF39Q86UA1 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
PRPF39Q86UA1 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PRPF39Q86UA1 SNORA73.1-201ENST00000363107 205 ntBASIC5.02□□□□□ -1.61
PRPF39Q86UA1 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.02□□□□□ -1.61
PRPF39Q86UA1 AC234782.4-201ENST00000417646 1048 ntBASIC5.02□□□□□ -1.61
PRPF39Q86UA1 AC092570.3-201ENST00000420113 693 ntBASIC5.02□□□□□ -1.61
PRPF39Q86UA1 AL606495.1-201ENST00000422100 813 ntBASIC5.02□□□□□ -1.61
PRPF39Q86UA1 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PRPF39Q86UA1 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC5.02□□□□□ -1.61
PRPF39Q86UA1 GEMIN8P3-201ENST00000445417 720 ntBASIC5.02□□□□□ -1.61
PRPF39Q86UA1 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PRPF39Q86UA1 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC5.02□□□□□ -1.61
PRPF39Q86UA1 GYG1P1-201ENST00000460864 698 ntBASIC5.02□□□□□ -1.61
PRPF39Q86UA1 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.02□□□□□ -1.61
PRPF39Q86UA1 TRBV8-2-201ENST00000475637 270 ntBASIC5.02□□□□□ -1.61
PRPF39Q86UA1 RN7SL346P-201ENST00000491561 294 ntBASIC5.02□□□□□ -1.61
PRPF39Q86UA1 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PRPF39Q86UA1 GAPDHP56-201ENST00000506031 988 ntBASIC5.02□□□□□ -1.61
PRPF39Q86UA1 RNA5SP392-201ENST00000516905 112 ntBASIC5.02□□□□□ -1.61
PRPF39Q86UA1 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.02□□□□□ -1.61
PRPF39Q86UA1 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC5.02□□□□□ -1.61
PRPF39Q86UA1 MIR4737-201ENST00000583979 81 ntBASIC5.02□□□□□ -1.61
PRPF39Q86UA1 AC012254.4-201ENST00000588843 273 ntBASIC5.02□□□□□ -1.61
PRPF39Q86UA1 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC5.02□□□□□ -1.61
PRPF39Q86UA1 AC098483.2-201ENST00000603158 454 ntBASIC5.02□□□□□ -1.61
PRPF39Q86UA1 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC5.02□□□□□ -1.61
PRPF39Q86UA1 AC090948.2-201ENST00000607363 564 ntBASIC5.02□□□□□ -1.61
PRPF39Q86UA1 AC245100.7-201ENST00000609678 442 ntBASIC5.02□□□□□ -1.61
PRPF39Q86UA1 AL049794.2-201ENST00000616301 365 ntBASIC5.02□□□□□ -1.61
PRPF39Q86UA1 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 298.4 ms