Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.79□□□□□ -1.48
ATG4DQ86TL0 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.79□□□□□ -1.48
ATG4DQ86TL0 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ATG4DQ86TL0 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.79□□□□□ -1.48
ATG4DQ86TL0 AL589743.6-201ENST00000611025 117 ntBASIC5.79□□□□□ -1.48
ATG4DQ86TL0 AL355974.3-201ENST00000617383 467 ntBASIC5.79□□□□□ -1.48
ATG4DQ86TL0 STMN1P1-201ENST00000617809 440 ntBASIC5.79□□□□□ -1.48
ATG4DQ86TL0 AC090971.5-201ENST00000621102 293 ntBASIC5.79□□□□□ -1.48
ATG4DQ86TL0 C2orf27A-204ENST00000623058 969 ntBASIC5.79□□□□□ -1.48
ATG4DQ86TL0 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.79□□□□□ -1.48
ATG4DQ86TL0 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC5.79□□□□□ -1.48
ATG4DQ86TL0 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.79□□□□□ -1.48
ATG4DQ86TL0 SEC63P2-201ENST00000503863 1939 ntBASIC5.79□□□□□ -1.48
ATG4DQ86TL0 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ATG4DQ86TL0 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
ATG4DQ86TL0 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ATG4DQ86TL0 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ATG4DQ86TL0 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC5.79□□□□□ -1.48
ATG4DQ86TL0 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
ATG4DQ86TL0 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ATG4DQ86TL0 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.79□□□□□ -1.48
ATG4DQ86TL0 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC5.79□□□□□ -1.48
ATG4DQ86TL0 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ATG4DQ86TL0 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.79□□□□□ -1.48
ATG4DQ86TL0 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ATG4DQ86TL0 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
ATG4DQ86TL0 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
ATG4DQ86TL0 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ATG4DQ86TL0 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ATG4DQ86TL0 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.78□□□□□ -1.48
ATG4DQ86TL0 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ATG4DQ86TL0 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
ATG4DQ86TL0 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ATG4DQ86TL0 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
ATG4DQ86TL0 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC5.78□□□□□ -1.48
ATG4DQ86TL0 HMGB1P5-201ENST00000255320 642 ntBASIC5.78□□□□□ -1.48
ATG4DQ86TL0 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ATG4DQ86TL0 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ATG4DQ86TL0 ENSAP3-201ENST00000312710 333 ntBASIC5.78□□□□□ -1.48
ATG4DQ86TL0 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
ATG4DQ86TL0 Y_RNA.97-201ENST00000363094 102 ntBASIC5.78□□□□□ -1.48
ATG4DQ86TL0 SNORA4.3-201ENST00000365564 137 ntBASIC5.78□□□□□ -1.48
ATG4DQ86TL0 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.78□□□□□ -1.48
ATG4DQ86TL0 SNORA70H-201ENST00000383910 135 ntBASIC5.78□□□□□ -1.48
ATG4DQ86TL0 SNORA70J-201ENST00000384182 135 ntBASIC5.78□□□□□ -1.48
ATG4DQ86TL0 RNU6-196P-201ENST00000384315 107 ntBASIC5.78□□□□□ -1.48
ATG4DQ86TL0 EI24P3-201ENST00000399046 1062 ntBASIC5.78□□□□□ -1.48
ATG4DQ86TL0 RNU6-195P-201ENST00000411352 109 ntBASIC5.78□□□□□ -1.48
ATG4DQ86TL0 ALDH7A1P4-201ENST00000412255 178 ntBASIC5.78□□□□□ -1.48
ATG4DQ86TL0 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.78□□□□□ -1.48
ATG4DQ86TL0 HMGB1P11-201ENST00000413899 637 ntBASIC5.78□□□□□ -1.48
ATG4DQ86TL0 SNRPEP10-201ENST00000420249 274 ntBASIC5.78□□□□□ -1.48
ATG4DQ86TL0 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC5.78□□□□□ -1.48
ATG4DQ86TL0 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC5.78□□□□□ -1.48
ATG4DQ86TL0 AL645939.3-201ENST00000435408 225 ntBASIC5.78□□□□□ -1.48
ATG4DQ86TL0 PGBD4P3-201ENST00000440731 581 ntBASIC5.78□□□□□ -1.48
ATG4DQ86TL0 AC016691.1-201ENST00000441321 413 ntBASIC5.78□□□□□ -1.48
ATG4DQ86TL0 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.78□□□□□ -1.48
ATG4DQ86TL0 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC5.78□□□□□ -1.48
ATG4DQ86TL0 AL022237.1-201ENST00000446663 358 ntBASIC5.78□□□□□ -1.48
ATG4DQ86TL0 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.78□□□□□ -1.48
ATG4DQ86TL0 AC097359.1-201ENST00000447946 463 ntBASIC5.78□□□□□ -1.48
ATG4DQ86TL0 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC5.78□□□□□ -1.48
ATG4DQ86TL0 Y_RNA.632-201ENST00000459189 102 ntBASIC5.78□□□□□ -1.48
ATG4DQ86TL0 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
ATG4DQ86TL0 RPL7P19-201ENST00000469948 618 ntBASIC5.78□□□□□ -1.48
ATG4DQ86TL0 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ATG4DQ86TL0 ACTR3P3-201ENST00000480448 893 ntBASIC5.78□□□□□ -1.48
ATG4DQ86TL0 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.78□□□□□ -1.48
ATG4DQ86TL0 TAF8-207ENST00000482432 556 ntTSL 2 BASIC5.78□□□□□ -1.48
ATG4DQ86TL0 OR9A1P-202ENST00000484361 945 ntBASIC5.78□□□□□ -1.48
ATG4DQ86TL0 RPS15AP36-201ENST00000492022 382 ntBASIC5.78□□□□□ -1.48
ATG4DQ86TL0 AC010493.1-201ENST00000513479 292 ntBASIC5.78□□□□□ -1.48
ATG4DQ86TL0 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC5.78□□□□□ -1.48
ATG4DQ86TL0 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC5.78□□□□□ -1.48
ATG4DQ86TL0 CDC42P3-201ENST00000518493 633 ntBASIC5.78□□□□□ -1.48
ATG4DQ86TL0 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.78□□□□□ -1.48
ATG4DQ86TL0 AC024405.1-201ENST00000532521 1042 ntBASIC5.78□□□□□ -1.48
ATG4DQ86TL0 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC5.78□□□□□ -1.48
ATG4DQ86TL0 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
ATG4DQ86TL0 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.78□□□□□ -1.48
ATG4DQ86TL0 AC023310.2-201ENST00000553844 547 ntBASIC5.78□□□□□ -1.48
ATG4DQ86TL0 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
ATG4DQ86TL0 AC110588.1-201ENST00000559699 137 ntBASIC5.78□□□□□ -1.48
ATG4DQ86TL0 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ATG4DQ86TL0 AC100830.2-201ENST00000581636 240 ntBASIC5.78□□□□□ -1.48
ATG4DQ86TL0 RN7SL475P-201ENST00000583379 298 ntBASIC5.78□□□□□ -1.48
ATG4DQ86TL0 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.78□□□□□ -1.48
ATG4DQ86TL0 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.78□□□□□ -1.48
ATG4DQ86TL0 AL162413.1-201ENST00000603198 110 ntBASIC5.78□□□□□ -1.48
ATG4DQ86TL0 AC112191.3-201ENST00000604371 277 ntBASIC5.78□□□□□ -1.48
ATG4DQ86TL0 AC018695.5-201ENST00000605872 315 ntBASIC5.78□□□□□ -1.48
ATG4DQ86TL0 AC004908.2-201ENST00000609090 574 ntBASIC5.78□□□□□ -1.48
ATG4DQ86TL0 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC5.78□□□□□ -1.48
ATG4DQ86TL0 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.78□□□□□ -1.48
ATG4DQ86TL0 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
ATG4DQ86TL0 AC011447.7-201ENST00000624228 1590 ntBASIC5.78□□□□□ -1.48
ATG4DQ86TL0 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC5.78□□□□□ -1.48
ATG4DQ86TL0 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ATG4DQ86TL0 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms