Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AL049737.1-201ENST00000413920 1403 ntBASIC4.65□□□□□ -1.66
NUP54Q7Z3B4 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.66
NUP54Q7Z3B4 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.66
NUP54Q7Z3B4 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.65□□□□□ -1.66
NUP54Q7Z3B4 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
NUP54Q7Z3B4 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.66
NUP54Q7Z3B4 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
NUP54Q7Z3B4 RNA5SP455-201ENST00000365190 119 ntBASIC4.65□□□□□ -1.67
NUP54Q7Z3B4 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
NUP54Q7Z3B4 MIR142-201ENST00000384835 87 ntBASIC4.65□□□□□ -1.67
NUP54Q7Z3B4 AC136624.1-201ENST00000400791 413 ntBASIC4.65□□□□□ -1.67
NUP54Q7Z3B4 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.65□□□□□ -1.67
NUP54Q7Z3B4 GJA6P-201ENST00000415117 1042 ntBASIC4.65□□□□□ -1.67
NUP54Q7Z3B4 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.65□□□□□ -1.67
NUP54Q7Z3B4 LINC01347-201ENST00000417964 355 ntBASIC4.65□□□□□ -1.67
NUP54Q7Z3B4 AC023347.2-201ENST00000433994 462 ntBASIC4.65□□□□□ -1.67
NUP54Q7Z3B4 ELOCP11-201ENST00000436690 332 ntBASIC4.65□□□□□ -1.67
NUP54Q7Z3B4 RPL7P29-201ENST00000437151 728 ntBASIC4.65□□□□□ -1.67
NUP54Q7Z3B4 OR7E125P-201ENST00000443450 846 ntBASIC4.65□□□□□ -1.67
NUP54Q7Z3B4 ELOCP16-201ENST00000444494 332 ntBASIC4.65□□□□□ -1.67
NUP54Q7Z3B4 RPL6P5-201ENST00000445678 828 ntBASIC4.65□□□□□ -1.67
NUP54Q7Z3B4 AC245028.2-201ENST00000458673 253 ntBASIC4.65□□□□□ -1.67
NUP54Q7Z3B4 CYCSP20-201ENST00000473154 315 ntBASIC4.65□□□□□ -1.67
NUP54Q7Z3B4 RN7SL97P-201ENST00000486780 299 ntBASIC4.65□□□□□ -1.67
NUP54Q7Z3B4 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.65□□□□□ -1.67
NUP54Q7Z3B4 AC010350.1-201ENST00000504908 231 ntBASIC4.65□□□□□ -1.67
NUP54Q7Z3B4 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.65□□□□□ -1.67
NUP54Q7Z3B4 AC027308.1-201ENST00000517993 110 ntBASIC4.65□□□□□ -1.67
NUP54Q7Z3B4 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
NUP54Q7Z3B4 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.65□□□□□ -1.67
NUP54Q7Z3B4 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.65□□□□□ -1.67
NUP54Q7Z3B4 BUD31P1-201ENST00000521828 359 ntBASIC4.65□□□□□ -1.67
NUP54Q7Z3B4 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
NUP54Q7Z3B4 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.65□□□□□ -1.67
NUP54Q7Z3B4 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.65□□□□□ -1.67
NUP54Q7Z3B4 AC044860.2-201ENST00000561005 179 ntBASIC4.65□□□□□ -1.67
NUP54Q7Z3B4 AC106734.1-201ENST00000568646 663 ntBASIC4.65□□□□□ -1.67
NUP54Q7Z3B4 AC124283.4-201ENST00000581815 456 ntBASIC4.65□□□□□ -1.67
NUP54Q7Z3B4 AC011840.5-201ENST00000582125 771 ntBASIC4.65□□□□□ -1.67
NUP54Q7Z3B4 AC105254.2-201ENST00000603636 436 ntBASIC4.65□□□□□ -1.67
NUP54Q7Z3B4 AC010680.3-201ENST00000604215 520 ntBASIC4.65□□□□□ -1.67
NUP54Q7Z3B4 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.65□□□□□ -1.67
NUP54Q7Z3B4 AC006213.4-201ENST00000616184 634 ntBASIC4.65□□□□□ -1.67
NUP54Q7Z3B4 AL445528.2-201ENST00000620582 470 ntBASIC4.65□□□□□ -1.67
NUP54Q7Z3B4 AC068870.2-201ENST00000620635 389 ntBASIC4.65□□□□□ -1.67
NUP54Q7Z3B4 AL391262.2-201ENST00000622466 494 ntBASIC4.65□□□□□ -1.67
NUP54Q7Z3B4 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.65□□□□□ -1.67
NUP54Q7Z3B4 AC009452.1-201ENST00000640823 606 ntBASIC4.65□□□□□ -1.67
NUP54Q7Z3B4 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.65□□□□□ -1.67
NUP54Q7Z3B4 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.65□□□□□ -1.67
NUP54Q7Z3B4 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.65□□□□□ -1.67
NUP54Q7Z3B4 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.65□□□□□ -1.67
NUP54Q7Z3B4 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
NUP54Q7Z3B4 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.65□□□□□ -1.67
NUP54Q7Z3B4 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
NUP54Q7Z3B4 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.64□□□□□ -1.67
NUP54Q7Z3B4 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.64□□□□□ -1.67
NUP54Q7Z3B4 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
NUP54Q7Z3B4 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
NUP54Q7Z3B4 RNU4-4P-201ENST00000364588 130 ntBASIC4.64□□□□□ -1.67
NUP54Q7Z3B4 AL645927.1-201ENST00000396783 406 ntBASIC4.64□□□□□ -1.67
NUP54Q7Z3B4 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
NUP54Q7Z3B4 BX664727.1-201ENST00000416024 466 ntBASIC4.64□□□□□ -1.67
NUP54Q7Z3B4 MTND2P15-201ENST00000418575 892 ntBASIC4.64□□□□□ -1.67
NUP54Q7Z3B4 AC114814.2-201ENST00000419195 485 ntBASIC4.64□□□□□ -1.67
NUP54Q7Z3B4 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.64□□□□□ -1.67
NUP54Q7Z3B4 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.64□□□□□ -1.67
NUP54Q7Z3B4 RPL7AP61-201ENST00000443410 636 ntBASIC4.64□□□□□ -1.67
NUP54Q7Z3B4 TPTE2P6-202ENST00000445572 1007 ntBASIC4.64□□□□□ -1.67
NUP54Q7Z3B4 AL935212.3-201ENST00000450729 284 ntBASIC4.64□□□□□ -1.67
NUP54Q7Z3B4 AC008379.1-201ENST00000463655 464 ntBASIC4.64□□□□□ -1.67
NUP54Q7Z3B4 AC069304.1-201ENST00000491593 704 ntBASIC4.64□□□□□ -1.67
NUP54Q7Z3B4 AC083829.1-201ENST00000503756 657 ntBASIC4.64□□□□□ -1.67
NUP54Q7Z3B4 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.64□□□□□ -1.67
NUP54Q7Z3B4 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.64□□□□□ -1.67
NUP54Q7Z3B4 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.64□□□□□ -1.67
NUP54Q7Z3B4 AC019227.1-201ENST00000526902 510 ntBASIC4.64□□□□□ -1.67
NUP54Q7Z3B4 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.64□□□□□ -1.67
NUP54Q7Z3B4 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.64□□□□□ -1.67
NUP54Q7Z3B4 AC025260.1-201ENST00000548858 430 ntBASIC4.64□□□□□ -1.67
NUP54Q7Z3B4 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.64□□□□□ -1.67
NUP54Q7Z3B4 AC116553.2-201ENST00000564203 463 ntBASIC4.64□□□□□ -1.67
NUP54Q7Z3B4 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.64□□□□□ -1.67
NUP54Q7Z3B4 EIF1P5-201ENST00000585002 234 ntBASIC4.64□□□□□ -1.67
NUP54Q7Z3B4 AC006116.7-201ENST00000590141 756 ntBASIC4.64□□□□□ -1.67
NUP54Q7Z3B4 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC4.64□□□□□ -1.67
NUP54Q7Z3B4 AC026741.1-201ENST00000605892 482 ntBASIC4.64□□□□□ -1.67
NUP54Q7Z3B4 AC243756.2-201ENST00000618406 463 ntBASIC4.64□□□□□ -1.67
NUP54Q7Z3B4 AC067852.7-201ENST00000623270 535 ntBASIC4.64□□□□□ -1.67
NUP54Q7Z3B4 AC011815.3-201ENST00000624194 473 ntBASIC4.64□□□□□ -1.67
NUP54Q7Z3B4 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.64□□□□□ -1.67
NUP54Q7Z3B4 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
NUP54Q7Z3B4 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.64□□□□□ -1.67
NUP54Q7Z3B4 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.64□□□□□ -1.67
NUP54Q7Z3B4 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.64□□□□□ -1.67
NUP54Q7Z3B4 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.64□□□□□ -1.67
NUP54Q7Z3B4 AC073136.1-201ENST00000449426 2884 ntBASIC4.63□□□□□ -1.67
NUP54Q7Z3B4 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.63□□□□□ -1.67
NUP54Q7Z3B4 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
NUP54Q7Z3B4 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms