Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.3□□□□□ -1.88
VPS13CQ709C8 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.3□□□□□ -1.88
VPS13CQ709C8 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC3.3□□□□□ -1.88
VPS13CQ709C8 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.3□□□□□ -1.88
VPS13CQ709C8 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.3□□□□□ -1.88
VPS13CQ709C8 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.3□□□□□ -1.88
VPS13CQ709C8 FRG1EP-201ENST00000634469 770 ntBASIC3.3□□□□□ -1.88
VPS13CQ709C8 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
VPS13CQ709C8 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC3.3□□□□□ -1.88
VPS13CQ709C8 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC3.3□□□□□ -1.88
VPS13CQ709C8 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
VPS13CQ709C8 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC3.3□□□□□ -1.88
VPS13CQ709C8 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
VPS13CQ709C8 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
VPS13CQ709C8 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.3□□□□□ -1.88
VPS13CQ709C8 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
VPS13CQ709C8 AC007066.1-201ENST00000392902 381 ntBASIC3.3□□□□□ -1.88
VPS13CQ709C8 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.3□□□□□ -1.88
VPS13CQ709C8 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.3□□□□□ -1.88
VPS13CQ709C8 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC3.3□□□□□ -1.88
VPS13CQ709C8 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
VPS13CQ709C8 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC3.3□□□□□ -1.88
VPS13CQ709C8 AC027176.2-201ENST00000559166 746 ntBASIC3.3□□□□□ -1.88
VPS13CQ709C8 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.3□□□□□ -1.88
VPS13CQ709C8 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC3.3□□□□□ -1.88
VPS13CQ709C8 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
VPS13CQ709C8 AC068254.2-201ENST00000623938 3577 ntBASIC3.29□□□□□ -1.88
VPS13CQ709C8 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.29□□□□□ -1.88
VPS13CQ709C8 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.29□□□□□ -1.88
VPS13CQ709C8 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC3.29□□□□□ -1.88
VPS13CQ709C8 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.29□□□□□ -1.88
VPS13CQ709C8 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
VPS13CQ709C8 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.29□□□□□ -1.88
VPS13CQ709C8 AC130352.1-201ENST00000602979 661 ntBASIC3.29□□□□□ -1.88
VPS13CQ709C8 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
VPS13CQ709C8 TMEM2-205ENST00000377066 5217 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
VPS13CQ709C8 AL022323.4-201ENST00000623980 13120 ntBASIC3.29□□□□□ -1.88
VPS13CQ709C8 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
VPS13CQ709C8 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC3.29□□□□□ -1.88
VPS13CQ709C8 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC3.29□□□□□ -1.88
VPS13CQ709C8 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC3.29□□□□□ -1.88
VPS13CQ709C8 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.29□□□□□ -1.88
VPS13CQ709C8 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.29□□□□□ -1.88
VPS13CQ709C8 RPS17P13-201ENST00000448974 407 ntBASIC3.29□□□□□ -1.88
VPS13CQ709C8 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC3.29□□□□□ -1.88
VPS13CQ709C8 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC3.29□□□□□ -1.88
VPS13CQ709C8 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.29□□□□□ -1.88
VPS13CQ709C8 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.29□□□□□ -1.88
VPS13CQ709C8 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.29□□□□□ -1.88
VPS13CQ709C8 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
VPS13CQ709C8 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.29□□□□□ -1.88
VPS13CQ709C8 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
VPS13CQ709C8 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC3.29□□□□□ -1.88
VPS13CQ709C8 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.29□□□□□ -1.88
VPS13CQ709C8 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
VPS13CQ709C8 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
VPS13CQ709C8 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
VPS13CQ709C8 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
VPS13CQ709C8 DHX9P1-201ENST00000436565 3076 ntBASIC3.29□□□□□ -1.88
VPS13CQ709C8 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
VPS13CQ709C8 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
VPS13CQ709C8 MIR128-1-201ENST00000384921 82 ntBASIC3.29□□□□□ -1.88
VPS13CQ709C8 AL035423.1-201ENST00000420331 213 ntBASIC3.29□□□□□ -1.88
VPS13CQ709C8 AC017015.1-201ENST00000477387 286 ntBASIC3.29□□□□□ -1.88
VPS13CQ709C8 AC090013.1-201ENST00000485147 480 ntBASIC3.29□□□□□ -1.88
VPS13CQ709C8 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.29□□□□□ -1.88
VPS13CQ709C8 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.29□□□□□ -1.88
VPS13CQ709C8 CYCSP40-201ENST00000575927 294 ntBASIC3.29□□□□□ -1.88
VPS13CQ709C8 MIR3922-201ENST00000585192 84 ntBASIC3.29□□□□□ -1.88
VPS13CQ709C8 AC243312.2-201ENST00000623340 601 ntBASIC3.29□□□□□ -1.88
VPS13CQ709C8 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
VPS13CQ709C8 AC097461.1-201ENST00000568928 2821 ntBASIC3.28□□□□□ -1.88
VPS13CQ709C8 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
VPS13CQ709C8 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
VPS13CQ709C8 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
VPS13CQ709C8 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
VPS13CQ709C8 BCLAF1P2-201ENST00000624956 2609 ntBASIC3.28□□□□□ -1.88
VPS13CQ709C8 SCARNA15-201ENST00000607520 4325 ntBASIC3.28□□□□□ -1.88
VPS13CQ709C8 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
VPS13CQ709C8 DNAJA1P1-201ENST00000425106 1187 ntBASIC3.28□□□□□ -1.88
VPS13CQ709C8 Z75741.1-201ENST00000446793 314 ntBASIC3.28□□□□□ -1.88
VPS13CQ709C8 AC027309.2-201ENST00000520566 192 ntBASIC3.28□□□□□ -1.88
VPS13CQ709C8 EIF4BP1-201ENST00000554881 351 ntBASIC3.28□□□□□ -1.88
VPS13CQ709C8 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.28□□□□□ -1.88
VPS13CQ709C8 MIR432-201ENST00000606207 94 ntBASIC3.28□□□□□ -1.88
VPS13CQ709C8 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.28□□□□□ -1.88
VPS13CQ709C8 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC3.28□□□□□ -1.88
VPS13CQ709C8 DNM1P47-203ENST00000571780 12667 ntBASIC3.28□□□□□ -1.88
VPS13CQ709C8 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
VPS13CQ709C8 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
VPS13CQ709C8 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.28□□□□□ -1.88
VPS13CQ709C8 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
VPS13CQ709C8 AC011755.1-201ENST00000623763 2049 ntBASIC3.28□□□□□ -1.88
VPS13CQ709C8 AC105074.1-201ENST00000623380 3095 ntBASIC3.28□□□□□ -1.88
VPS13CQ709C8 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
VPS13CQ709C8 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC3.28□□□□□ -1.88
VPS13CQ709C8 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
VPS13CQ709C8 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
VPS13CQ709C8 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
VPS13CQ709C8 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms