Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 TMX2P1-201ENST00000436507 708 ntBASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 RPL7P11-201ENST00000437586 658 ntBASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 AC073052.1-201ENST00000440417 714 ntBASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 AC068135.1-201ENST00000446164 246 ntBASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 AC000111.2-201ENST00000448200 210 ntBASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 HMGB3P21-201ENST00000452483 547 ntBASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 AC004815.1-201ENST00000484185 331 ntBASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 AC109462.1-201ENST00000491087 368 ntBASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 AC016550.1-201ENST00000505348 785 ntBASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 RN7SKP82-201ENST00000516786 223 ntBASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 AC112503.2-201ENST00000609005 552 ntBASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 AL049794.2-201ENST00000616301 365 ntBASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 MIR8069-1-201ENST00000616627 86 ntBASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 FRG1HP-204ENST00000617940 757 ntBASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 AC006249.1-201ENST00000621223 471 ntBASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 MIR8069-2-201ENST00000621412 86 ntBASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 MIR6730-201ENST00000622213 67 ntBASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 AC017104.5-201ENST00000637647 639 ntBASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 CASC19-222ENST00000641321 1173 ntBASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 AC109780.1-201ENST00000451768 1344 ntBASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 MFSD8-213ENST00000641134 1327 ntBASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 AC053481.2-202ENST00000582394 1500 ntBASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 CASC19-204ENST00000641001 2055 ntBASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.4□□□□□ -1.7
NHLRC1Q6VVB1 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
NHLRC1Q6VVB1 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
NHLRC1Q6VVB1 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
NHLRC1Q6VVB1 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
NHLRC1Q6VVB1 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.4□□□□□ -1.7
NHLRC1Q6VVB1 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
NHLRC1Q6VVB1 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
NHLRC1Q6VVB1 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
NHLRC1Q6VVB1 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
NHLRC1Q6VVB1 RNA5SP305-201ENST00000362665 119 ntBASIC4.4□□□□□ -1.71
NHLRC1Q6VVB1 SNORA73.1-201ENST00000363107 205 ntBASIC4.4□□□□□ -1.71
NHLRC1Q6VVB1 AL357515.1-201ENST00000402967 542 ntBASIC4.4□□□□□ -1.71
NHLRC1Q6VVB1 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
NHLRC1Q6VVB1 HNRNPDP2-201ENST00000406475 478 ntBASIC4.4□□□□□ -1.71
NHLRC1Q6VVB1 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.4□□□□□ -1.71
NHLRC1Q6VVB1 AL158825.1-201ENST00000414735 521 ntBASIC4.4□□□□□ -1.71
NHLRC1Q6VVB1 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.4□□□□□ -1.71
NHLRC1Q6VVB1 AL645608.4-201ENST00000423619 154 ntBASIC4.4□□□□□ -1.71
NHLRC1Q6VVB1 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC4.4□□□□□ -1.71
NHLRC1Q6VVB1 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.4□□□□□ -1.71
NHLRC1Q6VVB1 AC023347.2-201ENST00000433994 462 ntBASIC4.4□□□□□ -1.71
NHLRC1Q6VVB1 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.4□□□□□ -1.71
NHLRC1Q6VVB1 ELOCP11-201ENST00000436690 332 ntBASIC4.4□□□□□ -1.71
NHLRC1Q6VVB1 PSMD10P3-201ENST00000437000 448 ntBASIC4.4□□□□□ -1.71
NHLRC1Q6VVB1 NPM1P33-201ENST00000438918 872 ntBASIC4.4□□□□□ -1.71
NHLRC1Q6VVB1 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.4□□□□□ -1.71
NHLRC1Q6VVB1 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.4□□□□□ -1.71
NHLRC1Q6VVB1 ELOCP16-201ENST00000444494 332 ntBASIC4.4□□□□□ -1.71
NHLRC1Q6VVB1 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.4□□□□□ -1.71
NHLRC1Q6VVB1 YWHAQP9-201ENST00000445891 512 ntBASIC4.4□□□□□ -1.71
NHLRC1Q6VVB1 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.4□□□□□ -1.71
NHLRC1Q6VVB1 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.4□□□□□ -1.71
NHLRC1Q6VVB1 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.4□□□□□ -1.71
NHLRC1Q6VVB1 RPL23AP56-201ENST00000460778 453 ntBASIC4.4□□□□□ -1.71
NHLRC1Q6VVB1 RN7SL610P-201ENST00000463845 291 ntBASIC4.4□□□□□ -1.71
NHLRC1Q6VVB1 AC112206.1-201ENST00000468416 477 ntBASIC4.4□□□□□ -1.71
NHLRC1Q6VVB1 AL035404.1-201ENST00000497982 568 ntBASIC4.4□□□□□ -1.71
NHLRC1Q6VVB1 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC4.4□□□□□ -1.71
NHLRC1Q6VVB1 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.4□□□□□ -1.71
NHLRC1Q6VVB1 RN7SKP283-201ENST00000517197 270 ntBASIC4.4□□□□□ -1.71
NHLRC1Q6VVB1 AC083923.1-201ENST00000523708 376 ntBASIC4.4□□□□□ -1.71
NHLRC1Q6VVB1 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.4□□□□□ -1.71
NHLRC1Q6VVB1 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.4□□□□□ -1.71
NHLRC1Q6VVB1 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.4□□□□□ -1.71
NHLRC1Q6VVB1 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.4□□□□□ -1.71
NHLRC1Q6VVB1 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
NHLRC1Q6VVB1 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.4□□□□□ -1.71
NHLRC1Q6VVB1 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC4.4□□□□□ -1.71
NHLRC1Q6VVB1 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.4□□□□□ -1.71
NHLRC1Q6VVB1 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
NHLRC1Q6VVB1 OR7E18P-201ENST00000592589 702 ntBASIC4.4□□□□□ -1.71
NHLRC1Q6VVB1 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC4.4□□□□□ -1.71
NHLRC1Q6VVB1 AC093765.1-201ENST00000603758 881 ntBASIC4.4□□□□□ -1.71
NHLRC1Q6VVB1 AC018926.1-201ENST00000616335 435 ntBASIC4.4□□□□□ -1.71
NHLRC1Q6VVB1 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.4□□□□□ -1.71
NHLRC1Q6VVB1 AC006213.5-201ENST00000619673 288 ntBASIC4.4□□□□□ -1.71
NHLRC1Q6VVB1 AL590396.2-201ENST00000636511 1041 ntBASIC4.4□□□□□ -1.71
NHLRC1Q6VVB1 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
NHLRC1Q6VVB1 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.4□□□□□ -1.71
NHLRC1Q6VVB1 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms