Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 RPL12P9-201ENST00000412942 488 ntBASIC5.26□□□□□ -1.57
RNF220Q5VTB9 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC5.26□□□□□ -1.57
RNF220Q5VTB9 BOLA3P4-201ENST00000418151 400 ntBASIC5.26□□□□□ -1.57
RNF220Q5VTB9 AC019050.1-201ENST00000418508 492 ntBASIC5.26□□□□□ -1.57
RNF220Q5VTB9 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC5.26□□□□□ -1.57
RNF220Q5VTB9 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.26□□□□□ -1.57
RNF220Q5VTB9 AC012519.1-201ENST00000424588 610 ntBASIC5.26□□□□□ -1.57
RNF220Q5VTB9 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC5.26□□□□□ -1.57
RNF220Q5VTB9 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.26□□□□□ -1.57
RNF220Q5VTB9 AC126120.1-201ENST00000431082 470 ntBASIC5.26□□□□□ -1.57
RNF220Q5VTB9 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
RNF220Q5VTB9 GAPDHP48-201ENST00000436626 961 ntBASIC5.26□□□□□ -1.57
RNF220Q5VTB9 NPM1P33-201ENST00000438918 872 ntBASIC5.26□□□□□ -1.57
RNF220Q5VTB9 AMYP1-201ENST00000440059 1023 ntBASIC5.26□□□□□ -1.57
RNF220Q5VTB9 GTF3AP5-201ENST00000442645 697 ntBASIC5.26□□□□□ -1.57
RNF220Q5VTB9 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.26□□□□□ -1.57
RNF220Q5VTB9 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.26□□□□□ -1.57
RNF220Q5VTB9 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC5.26□□□□□ -1.57
RNF220Q5VTB9 NF1P3-201ENST00000457709 450 ntBASIC5.26□□□□□ -1.57
RNF220Q5VTB9 OR52A4P-201ENST00000472867 958 ntBASIC5.26□□□□□ -1.57
RNF220Q5VTB9 RPS3AP22-201ENST00000488297 769 ntBASIC5.26□□□□□ -1.57
RNF220Q5VTB9 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.26□□□□□ -1.57
RNF220Q5VTB9 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.26□□□□□ -1.57
RNF220Q5VTB9 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.26□□□□□ -1.57
RNF220Q5VTB9 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC5.26□□□□□ -1.57
RNF220Q5VTB9 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.26□□□□□ -1.57
RNF220Q5VTB9 AC100784.1-201ENST00000522790 310 ntBASIC5.26□□□□□ -1.57
RNF220Q5VTB9 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
RNF220Q5VTB9 AP000648.1-201ENST00000529682 397 ntBASIC5.26□□□□□ -1.57
RNF220Q5VTB9 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
RNF220Q5VTB9 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC5.26□□□□□ -1.57
RNF220Q5VTB9 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.26□□□□□ -1.57
RNF220Q5VTB9 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.26□□□□□ -1.57
RNF220Q5VTB9 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.26□□□□□ -1.57
RNF220Q5VTB9 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.26□□□□□ -1.57
RNF220Q5VTB9 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.26□□□□□ -1.57
RNF220Q5VTB9 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.26□□□□□ -1.57
RNF220Q5VTB9 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.26□□□□□ -1.57
RNF220Q5VTB9 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC5.26□□□□□ -1.57
RNF220Q5VTB9 AL158042.1-201ENST00000605338 460 ntBASIC5.26□□□□□ -1.57
RNF220Q5VTB9 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.26□□□□□ -1.57
RNF220Q5VTB9 AL031601.1-201ENST00000605702 394 ntBASIC5.26□□□□□ -1.57
RNF220Q5VTB9 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.26□□□□□ -1.57
RNF220Q5VTB9 AC005332.6-201ENST00000613178 446 ntBASIC5.26□□□□□ -1.57
RNF220Q5VTB9 AC073348.1-201ENST00000623002 331 ntBASIC5.26□□□□□ -1.57
RNF220Q5VTB9 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC5.26□□□□□ -1.57
RNF220Q5VTB9 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.26□□□□□ -1.57
RNF220Q5VTB9 AC068620.4-201ENST00000636730 1182 ntBASIC5.26□□□□□ -1.57
RNF220Q5VTB9 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RNF220Q5VTB9 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RNF220Q5VTB9 SAMMSON-213ENST00000641336 1521 ntBASIC5.26□□□□□ -1.57
RNF220Q5VTB9 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
RNF220Q5VTB9 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
RNF220Q5VTB9 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RNF220Q5VTB9 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.26□□□□□ -1.57
RNF220Q5VTB9 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RNF220Q5VTB9 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
RNF220Q5VTB9 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC5.25□□□□□ -1.57
RNF220Q5VTB9 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
RNF220Q5VTB9 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
RNF220Q5VTB9 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RNF220Q5VTB9 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.25□□□□□ -1.57
RNF220Q5VTB9 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.25□□□□□ -1.57
RNF220Q5VTB9 XPOTP1-201ENST00000443317 2398 ntBASIC5.25□□□□□ -1.57
RNF220Q5VTB9 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
RNF220Q5VTB9 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
RNF220Q5VTB9 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
RNF220Q5VTB9 RNA5SP477-201ENST00000362639 119 ntBASIC5.25□□□□□ -1.57
RNF220Q5VTB9 RNA5SP326-201ENST00000363209 110 ntBASIC5.25□□□□□ -1.57
RNF220Q5VTB9 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RNF220Q5VTB9 AL078599.1-201ENST00000402075 293 ntBASIC5.25□□□□□ -1.57
RNF220Q5VTB9 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.25□□□□□ -1.57
RNF220Q5VTB9 RAP1BP1-201ENST00000412709 553 ntBASIC5.25□□□□□ -1.57
RNF220Q5VTB9 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RNF220Q5VTB9 MRPL53P1-201ENST00000414323 319 ntBASIC5.25□□□□□ -1.57
RNF220Q5VTB9 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.25□□□□□ -1.57
RNF220Q5VTB9 AKR1B10P1-201ENST00000425765 942 ntBASIC5.25□□□□□ -1.57
RNF220Q5VTB9 MTND6P12-201ENST00000428247 522 ntBASIC5.25□□□□□ -1.57
RNF220Q5VTB9 SETP8-201ENST00000435341 628 ntBASIC5.25□□□□□ -1.57
RNF220Q5VTB9 NDUFS5P5-201ENST00000437256 321 ntBASIC5.25□□□□□ -1.57
RNF220Q5VTB9 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.25□□□□□ -1.57
RNF220Q5VTB9 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.25□□□□□ -1.57
RNF220Q5VTB9 AL672138.1-201ENST00000450604 1015 ntBASIC5.25□□□□□ -1.57
RNF220Q5VTB9 NDUFA5P7-201ENST00000452914 242 ntBASIC5.25□□□□□ -1.57
RNF220Q5VTB9 RPS15AP1-201ENST00000457423 391 ntBASIC5.25□□□□□ -1.57
RNF220Q5VTB9 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC5.25□□□□□ -1.57
RNF220Q5VTB9 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.25□□□□□ -1.57
RNF220Q5VTB9 GAPDHP36-201ENST00000480688 918 ntBASIC5.25□□□□□ -1.57
RNF220Q5VTB9 ATP5LP5-201ENST00000483050 299 ntBASIC5.25□□□□□ -1.57
RNF220Q5VTB9 RPL30P11-201ENST00000495304 339 ntBASIC5.25□□□□□ -1.57
RNF220Q5VTB9 AC025458.1-201ENST00000506046 166 ntBASIC5.25□□□□□ -1.57
RNF220Q5VTB9 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.25□□□□□ -1.57
RNF220Q5VTB9 KRT19P6-201ENST00000510983 209 ntBASIC5.25□□□□□ -1.57
RNF220Q5VTB9 AC118465.1-201ENST00000513820 1271 ntBASIC5.25□□□□□ -1.57
RNF220Q5VTB9 SOD1P3-201ENST00000518682 454 ntBASIC5.25□□□□□ -1.57
RNF220Q5VTB9 CA1-215ENST00000522389 551 ntTSL 3 BASIC5.25□□□□□ -1.57
RNF220Q5VTB9 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.25□□□□□ -1.57
RNF220Q5VTB9 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
RNF220Q5VTB9 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
RNF220Q5VTB9 MTCYBP27-201ENST00000555160 670 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms