Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 OR4G1P-202ENST00000641173 1788 ntBASIC7.83□□□□□ -1.16
RC3H1Q5TC82 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC7.83□□□□□ -1.16
RC3H1Q5TC82 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
RC3H1Q5TC82 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
RC3H1Q5TC82 AC009120.2-204ENST00000621548 2032 ntBASIC7.83□□□□□ -1.16
RC3H1Q5TC82 EEF1A1P14-201ENST00000421195 1376 ntBASIC7.83□□□□□ -1.16
RC3H1Q5TC82 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC7.83□□□□□ -1.16
RC3H1Q5TC82 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
RC3H1Q5TC82 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
RC3H1Q5TC82 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
RC3H1Q5TC82 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
RC3H1Q5TC82 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
RC3H1Q5TC82 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
RC3H1Q5TC82 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC7.82□□□□□ -1.16
RC3H1Q5TC82 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
RC3H1Q5TC82 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
RC3H1Q5TC82 LARS-212ENST00000510191 3737 ntTSL 2 BASIC7.82□□□□□ -1.16
RC3H1Q5TC82 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
RC3H1Q5TC82 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC7.82□□□□□ -1.16
RC3H1Q5TC82 RNU6-433P-201ENST00000363216 104 ntBASIC7.82□□□□□ -1.16
RC3H1Q5TC82 SNORA43.1-201ENST00000364863 140 ntBASIC7.82□□□□□ -1.16
RC3H1Q5TC82 Y_RNA.315-201ENST00000365117 102 ntBASIC7.82□□□□□ -1.16
RC3H1Q5TC82 MIR142-201ENST00000384835 87 ntBASIC7.82□□□□□ -1.16
RC3H1Q5TC82 RPS24P12-201ENST00000402084 394 ntBASIC7.82□□□□□ -1.16
RC3H1Q5TC82 RPL10P10-201ENST00000403509 664 ntBASIC7.82□□□□□ -1.16
RC3H1Q5TC82 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC7.82□□□□□ -1.16
RC3H1Q5TC82 AC109780.2-201ENST00000413467 845 ntBASIC7.82□□□□□ -1.16
RC3H1Q5TC82 LINC01347-201ENST00000417964 355 ntBASIC7.82□□□□□ -1.16
RC3H1Q5TC82 RPL34P3-201ENST00000421454 338 ntBASIC7.82□□□□□ -1.16
RC3H1Q5TC82 AL592293.2-201ENST00000422292 996 ntBASIC7.82□□□□□ -1.16
RC3H1Q5TC82 SEPT7P5-201ENST00000434048 306 ntBASIC7.82□□□□□ -1.16
RC3H1Q5TC82 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC7.82□□□□□ -1.16
RC3H1Q5TC82 AC006480.1-201ENST00000449887 378 ntBASIC7.82□□□□□ -1.16
RC3H1Q5TC82 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC7.82□□□□□ -1.16
RC3H1Q5TC82 AC107398.1-201ENST00000486904 505 ntBASIC7.82□□□□□ -1.16
RC3H1Q5TC82 AC012170.1-201ENST00000495139 359 ntBASIC7.82□□□□□ -1.16
RC3H1Q5TC82 SETP14-201ENST00000497538 873 ntBASIC7.82□□□□□ -1.16
RC3H1Q5TC82 KCTD9P5-201ENST00000504141 1170 ntBASIC7.82□□□□□ -1.16
RC3H1Q5TC82 SNORA58-201ENST00000505219 137 ntBASIC7.82□□□□□ -1.16
RC3H1Q5TC82 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC7.82□□□□□ -1.16
RC3H1Q5TC82 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC7.82□□□□□ -1.16
RC3H1Q5TC82 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
RC3H1Q5TC82 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC7.82□□□□□ -1.16
RC3H1Q5TC82 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC7.82□□□□□ -1.16
RC3H1Q5TC82 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC7.82□□□□□ -1.16
RC3H1Q5TC82 AC109635.6-201ENST00000525487 1113 ntBASIC7.82□□□□□ -1.16
RC3H1Q5TC82 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC7.82□□□□□ -1.16
RC3H1Q5TC82 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC7.82□□□□□ -1.16
RC3H1Q5TC82 AL390334.1-201ENST00000556395 450 ntBASIC7.82□□□□□ -1.16
RC3H1Q5TC82 AC019322.1-201ENST00000571869 389 ntBASIC7.82□□□□□ -1.16
RC3H1Q5TC82 AC100830.2-201ENST00000581636 240 ntBASIC7.82□□□□□ -1.16
RC3H1Q5TC82 AL162413.1-201ENST00000603198 110 ntBASIC7.82□□□□□ -1.16
RC3H1Q5TC82 RNU6-88P-201ENST00000606801 100 ntBASIC7.82□□□□□ -1.16
RC3H1Q5TC82 SDR42E1P1-201ENST00000611327 477 ntBASIC7.82□□□□□ -1.16
RC3H1Q5TC82 AC015908.5-201ENST00000623289 343 ntBASIC7.82□□□□□ -1.16
RC3H1Q5TC82 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
RC3H1Q5TC82 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
RC3H1Q5TC82 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC7.82□□□□□ -1.16
RC3H1Q5TC82 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
RC3H1Q5TC82 GUCY1B2-204ENST00000531898 1979 ntBASIC7.82□□□□□ -1.16
RC3H1Q5TC82 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
RC3H1Q5TC82 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC7.82□□□□□ -1.16
RC3H1Q5TC82 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC7.82□□□□□ -1.16
RC3H1Q5TC82 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
RC3H1Q5TC82 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
RC3H1Q5TC82 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
RC3H1Q5TC82 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC7.82□□□□□ -1.16
RC3H1Q5TC82 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC7.82□□□□□ -1.16
RC3H1Q5TC82 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
RC3H1Q5TC82 COG2-209ENST00000534989 2963 ntTSL 2 BASIC7.81□□□□□ -1.16
RC3H1Q5TC82 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
RC3H1Q5TC82 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
RC3H1Q5TC82 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
RC3H1Q5TC82 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
RC3H1Q5TC82 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
RC3H1Q5TC82 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC7.81□□□□□ -1.16
RC3H1Q5TC82 RNU6-474P-201ENST00000384243 107 ntBASIC7.81□□□□□ -1.16
RC3H1Q5TC82 RNU6-908P-201ENST00000410160 94 ntBASIC7.81□□□□□ -1.16
RC3H1Q5TC82 RNU2-39P-201ENST00000410604 198 ntBASIC7.81□□□□□ -1.16
RC3H1Q5TC82 RPS3AP3-201ENST00000411933 242 ntBASIC7.81□□□□□ -1.16
RC3H1Q5TC82 AC211486.3-201ENST00000412694 621 ntBASIC7.81□□□□□ -1.16
RC3H1Q5TC82 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
RC3H1Q5TC82 RPL35AP24-201ENST00000413846 330 ntBASIC7.81□□□□□ -1.16
RC3H1Q5TC82 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC7.81□□□□□ -1.16
RC3H1Q5TC82 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
RC3H1Q5TC82 RIMKLBP2-201ENST00000424737 654 ntBASIC7.81□□□□□ -1.16
RC3H1Q5TC82 FCF1P1-201ENST00000432690 571 ntBASIC7.81□□□□□ -1.16
RC3H1Q5TC82 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC7.81□□□□□ -1.16
RC3H1Q5TC82 MRPL50P4-201ENST00000446432 475 ntBASIC7.81□□□□□ -1.16
RC3H1Q5TC82 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
RC3H1Q5TC82 RGS5-217ENST00000451759 835 ntTSL 3 BASIC7.81□□□□□ -1.16
RC3H1Q5TC82 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC7.81□□□□□ -1.16
RC3H1Q5TC82 GAPDHP39-201ENST00000481866 979 ntBASIC7.81□□□□□ -1.16
RC3H1Q5TC82 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC7.81□□□□□ -1.16
RC3H1Q5TC82 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC7.81□□□□□ -1.16
RC3H1Q5TC82 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC7.81□□□□□ -1.16
RC3H1Q5TC82 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC7.81□□□□□ -1.16
RC3H1Q5TC82 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC7.81□□□□□ -1.16
RC3H1Q5TC82 AC139493.1-201ENST00000604368 397 ntBASIC7.81□□□□□ -1.16
RC3H1Q5TC82 AL445647.2-201ENST00000615170 130 ntBASIC7.81□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms