Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 OR4K7P-201ENST00000580232 945 ntBASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 AC017100.2-201ENST00000584628 355 ntBASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 AL031281.1-201ENST00000604049 488 ntBASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 AC100847.1-201ENST00000611316 481 ntBASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 AP001005.3-201ENST00000622049 129 ntBASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 AC005332.5-201ENST00000591222 2919 ntBASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 AC007938.2-201ENST00000604666 2634 ntBASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC144BQ3MJ40 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
CCDC144BQ3MJ40 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
CCDC144BQ3MJ40 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC144BQ3MJ40 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC144BQ3MJ40 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.41□□□□□ -1.38
CCDC144BQ3MJ40 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6.41□□□□□ -1.38
CCDC144BQ3MJ40 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC6.41□□□□□ -1.38
CCDC144BQ3MJ40 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
CCDC144BQ3MJ40 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
CCDC144BQ3MJ40 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC144BQ3MJ40 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC144BQ3MJ40 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC144BQ3MJ40 SNORA70.6-201ENST00000383934 134 ntBASIC6.41□□□□□ -1.38
CCDC144BQ3MJ40 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
CCDC144BQ3MJ40 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC6.41□□□□□ -1.38
CCDC144BQ3MJ40 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC144BQ3MJ40 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC144BQ3MJ40 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC6.41□□□□□ -1.38
CCDC144BQ3MJ40 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC144BQ3MJ40 COX6CP18-201ENST00000448769 222 ntBASIC6.41□□□□□ -1.38
CCDC144BQ3MJ40 Z99714.1-201ENST00000450463 807 ntBASIC6.41□□□□□ -1.38
CCDC144BQ3MJ40 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC6.41□□□□□ -1.38
CCDC144BQ3MJ40 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
CCDC144BQ3MJ40 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC144BQ3MJ40 Y_RNA.688-201ENST00000516565 95 ntBASIC6.41□□□□□ -1.38
CCDC144BQ3MJ40 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC6.41□□□□□ -1.38
CCDC144BQ3MJ40 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC144BQ3MJ40 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC144BQ3MJ40 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.41□□□□□ -1.38
CCDC144BQ3MJ40 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC144BQ3MJ40 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC144BQ3MJ40 AC022069.1-201ENST00000582910 658 ntBASIC6.41□□□□□ -1.38
CCDC144BQ3MJ40 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC144BQ3MJ40 AL158042.1-201ENST00000605338 460 ntBASIC6.41□□□□□ -1.38
CCDC144BQ3MJ40 AC090607.5-201ENST00000615692 224 ntBASIC6.41□□□□□ -1.38
CCDC144BQ3MJ40 AL603755.1-201ENST00000619504 163 ntBASIC6.41□□□□□ -1.38
CCDC144BQ3MJ40 AC068620.4-201ENST00000636730 1182 ntBASIC6.41□□□□□ -1.38
CCDC144BQ3MJ40 OR8B1P-202ENST00000641132 1178 ntBASIC6.41□□□□□ -1.38
CCDC144BQ3MJ40 CASC19-222ENST00000641321 1173 ntBASIC6.41□□□□□ -1.38
CCDC144BQ3MJ40 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.41□□□□□ -1.38
CCDC144BQ3MJ40 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
CCDC144BQ3MJ40 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6.41□□□□□ -1.38
CCDC144BQ3MJ40 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.4□□□□□ -1.38
CCDC144BQ3MJ40 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC144BQ3MJ40 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC144BQ3MJ40 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC144BQ3MJ40 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC144BQ3MJ40 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC144BQ3MJ40 OR5H2-201ENST00000355273 945 ntBASIC6.4□□□□□ -1.38
CCDC144BQ3MJ40 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC6.4□□□□□ -1.38
CCDC144BQ3MJ40 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
CCDC144BQ3MJ40 RNA5SP183-201ENST00000362452 119 ntBASIC6.4□□□□□ -1.38
CCDC144BQ3MJ40 RNU6-582P-201ENST00000362989 107 ntBASIC6.4□□□□□ -1.38
CCDC144BQ3MJ40 RNU4-2-201ENST00000365668 141 ntBASIC6.4□□□□□ -1.38
CCDC144BQ3MJ40 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC6.4□□□□□ -1.38
CCDC144BQ3MJ40 RNU1-136P-201ENST00000384181 164 ntBASIC6.4□□□□□ -1.38
CCDC144BQ3MJ40 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
CCDC144BQ3MJ40 AC005042.1-201ENST00000393397 800 ntBASIC6.4□□□□□ -1.38
CCDC144BQ3MJ40 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
CCDC144BQ3MJ40 RPS6P23-201ENST00000413224 722 ntBASIC6.4□□□□□ -1.38
CCDC144BQ3MJ40 AC019050.1-201ENST00000418508 492 ntBASIC6.4□□□□□ -1.38
CCDC144BQ3MJ40 SLC35E1P1-201ENST00000419313 864 ntBASIC6.4□□□□□ -1.38
CCDC144BQ3MJ40 AC233981.1-201ENST00000423224 461 ntBASIC6.4□□□□□ -1.38
CCDC144BQ3MJ40 AL365396.1-201ENST00000430854 671 ntBASIC6.4□□□□□ -1.38
CCDC144BQ3MJ40 RPL37P1-201ENST00000432310 284 ntBASIC6.4□□□□□ -1.38
CCDC144BQ3MJ40 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC144BQ3MJ40 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC144BQ3MJ40 MTCYBP34-201ENST00000439552 670 ntBASIC6.4□□□□□ -1.38
CCDC144BQ3MJ40 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC6.4□□□□□ -1.38
CCDC144BQ3MJ40 VDAC2P4-201ENST00000452925 711 ntBASIC6.4□□□□□ -1.38
CCDC144BQ3MJ40 RN7SL826P-201ENST00000479724 288 ntBASIC6.4□□□□□ -1.38
CCDC144BQ3MJ40 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC144BQ3MJ40 UBA52P3-201ENST00000491303 382 ntBASIC6.4□□□□□ -1.38
CCDC144BQ3MJ40 AC011352.3-201ENST00000505162 593 ntBASIC6.4□□□□□ -1.38
CCDC144BQ3MJ40 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.4□□□□□ -1.38
CCDC144BQ3MJ40 PGAM1P13-201ENST00000507497 754 ntBASIC6.4□□□□□ -1.38
CCDC144BQ3MJ40 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC6.4□□□□□ -1.38
CCDC144BQ3MJ40 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC144BQ3MJ40 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC6.4□□□□□ -1.38
CCDC144BQ3MJ40 MTCYBP27-201ENST00000555160 670 ntBASIC6.4□□□□□ -1.38
CCDC144BQ3MJ40 AC093519.1-201ENST00000566109 298 ntBASIC6.4□□□□□ -1.38
CCDC144BQ3MJ40 AC109446.2-201ENST00000567872 497 ntBASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms