Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC091965.3-201ENST00000506236 208 ntBASIC6.27□□□□□ -1.41
PCDH1Q08174 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC6.27□□□□□ -1.41
PCDH1Q08174 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC6.27□□□□□ -1.41
PCDH1Q08174 RN7SKP283-201ENST00000517197 270 ntBASIC6.27□□□□□ -1.41
PCDH1Q08174 IGHV1-14-201ENST00000523391 241 ntBASIC6.27□□□□□ -1.41
PCDH1Q08174 AP003080.1-202ENST00000526526 915 ntBASIC6.27□□□□□ -1.41
PCDH1Q08174 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC6.27□□□□□ -1.41
PCDH1Q08174 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC6.27□□□□□ -1.41
PCDH1Q08174 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC6.27□□□□□ -1.41
PCDH1Q08174 AC087477.6-201ENST00000559595 843 ntBASIC6.27□□□□□ -1.41
PCDH1Q08174 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.27□□□□□ -1.41
PCDH1Q08174 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.27□□□□□ -1.41
PCDH1Q08174 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC6.27□□□□□ -1.41
PCDH1Q08174 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC6.27□□□□□ -1.41
PCDH1Q08174 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC6.27□□□□□ -1.41
PCDH1Q08174 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC6.27□□□□□ -1.41
PCDH1Q08174 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC6.27□□□□□ -1.41
PCDH1Q08174 HMGN1P30-201ENST00000589286 268 ntBASIC6.27□□□□□ -1.41
PCDH1Q08174 AL359999.1-201ENST00000604513 294 ntBASIC6.27□□□□□ -1.41
PCDH1Q08174 AC011891.2-201ENST00000604949 397 ntBASIC6.27□□□□□ -1.41
PCDH1Q08174 SNORD96A-201ENST00000606577 79 ntBASIC6.27□□□□□ -1.41
PCDH1Q08174 Z95327.3-201ENST00000610385 572 ntBASIC6.27□□□□□ -1.41
PCDH1Q08174 MIR6849-201ENST00000618543 69 ntBASIC6.27□□□□□ -1.41
PCDH1Q08174 AC009268.2-201ENST00000621925 457 ntBASIC6.27□□□□□ -1.41
PCDH1Q08174 SAMMSON-227ENST00000642114 1199 ntBASIC6.27□□□□□ -1.41
PCDH1Q08174 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.27□□□□□ -1.41
PCDH1Q08174 AL022323.4-201ENST00000623980 13120 ntBASIC6.27□□□□□ -1.41
PCDH1Q08174 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
PCDH1Q08174 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
PCDH1Q08174 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
PCDH1Q08174 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PCDH1Q08174 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.27□□□□□ -1.41
PCDH1Q08174 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC6.27□□□□□ -1.41
PCDH1Q08174 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
PCDH1Q08174 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.27□□□□□ -1.41
PCDH1Q08174 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
PCDH1Q08174 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
PCDH1Q08174 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC6.27□□□□□ -1.41
PCDH1Q08174 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
PCDH1Q08174 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.26□□□□□ -1.41
PCDH1Q08174 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.26□□□□□ -1.41
PCDH1Q08174 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PCDH1Q08174 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PCDH1Q08174 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC6.26□□□□□ -1.41
PCDH1Q08174 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
PCDH1Q08174 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PCDH1Q08174 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PCDH1Q08174 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.26□□□□□ -1.41
PCDH1Q08174 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PCDH1Q08174 AC107021.2-201ENST00000567714 2095 ntBASIC6.26□□□□□ -1.41
PCDH1Q08174 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
PCDH1Q08174 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.26□□□□□ -1.41
PCDH1Q08174 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PCDH1Q08174 RN7SKP184-201ENST00000362348 333 ntBASIC6.26□□□□□ -1.41
PCDH1Q08174 Y_RNA.72-201ENST00000362894 103 ntBASIC6.26□□□□□ -1.41
PCDH1Q08174 Y_RNA.481-201ENST00000384373 102 ntBASIC6.26□□□□□ -1.41
PCDH1Q08174 RNU6-1151P-201ENST00000384684 107 ntBASIC6.26□□□□□ -1.41
PCDH1Q08174 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC6.26□□□□□ -1.41
PCDH1Q08174 RSU1P3-201ENST00000412878 835 ntBASIC6.26□□□□□ -1.41
PCDH1Q08174 RANP6-201ENST00000413691 644 ntBASIC6.26□□□□□ -1.41
PCDH1Q08174 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.26□□□□□ -1.41
PCDH1Q08174 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC6.26□□□□□ -1.41
PCDH1Q08174 SDCBPP2-201ENST00000424643 885 ntBASIC6.26□□□□□ -1.41
PCDH1Q08174 USP9YP9-201ENST00000429406 715 ntBASIC6.26□□□□□ -1.41
PCDH1Q08174 NDUFA5P4-201ENST00000436704 385 ntBASIC6.26□□□□□ -1.41
PCDH1Q08174 SNRPEP7-201ENST00000438350 220 ntBASIC6.26□□□□□ -1.41
PCDH1Q08174 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC6.26□□□□□ -1.41
PCDH1Q08174 RPL23AP16-201ENST00000441715 421 ntBASIC6.26□□□□□ -1.41
PCDH1Q08174 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC6.26□□□□□ -1.41
PCDH1Q08174 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.26□□□□□ -1.41
PCDH1Q08174 RPL23AP20-201ENST00000447965 421 ntBASIC6.26□□□□□ -1.41
PCDH1Q08174 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.26□□□□□ -1.41
PCDH1Q08174 MTCO1P42-201ENST00000457379 726 ntBASIC6.26□□□□□ -1.41
PCDH1Q08174 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC6.26□□□□□ -1.41
PCDH1Q08174 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.26□□□□□ -1.41
PCDH1Q08174 RN7SL70P-201ENST00000478322 302 ntBASIC6.26□□□□□ -1.41
PCDH1Q08174 RPL39P36-201ENST00000490784 156 ntBASIC6.26□□□□□ -1.41
PCDH1Q08174 AC008629.2-201ENST00000503783 483 ntBASIC6.26□□□□□ -1.41
PCDH1Q08174 FGF7P4-201ENST00000509595 295 ntBASIC6.26□□□□□ -1.41
PCDH1Q08174 COX6B1P6-201ENST00000522347 255 ntBASIC6.26□□□□□ -1.41
PCDH1Q08174 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC6.26□□□□□ -1.41
PCDH1Q08174 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC6.26□□□□□ -1.41
PCDH1Q08174 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
PCDH1Q08174 AP000790.1-201ENST00000528891 737 ntBASIC6.26□□□□□ -1.41
PCDH1Q08174 AC022832.1-201ENST00000530718 645 ntBASIC6.26□□□□□ -1.41
PCDH1Q08174 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC6.26□□□□□ -1.41
PCDH1Q08174 ASB8-207ENST00000536953 923 ntTSL 2 BASIC6.26□□□□□ -1.41
PCDH1Q08174 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC6.26□□□□□ -1.41
PCDH1Q08174 HIF1AP1-201ENST00000553642 175 ntBASIC6.26□□□□□ -1.41
PCDH1Q08174 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.26□□□□□ -1.41
PCDH1Q08174 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.26□□□□□ -1.41
PCDH1Q08174 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC6.26□□□□□ -1.41
PCDH1Q08174 AC079315.1-201ENST00000602952 623 ntBASIC6.26□□□□□ -1.41
PCDH1Q08174 AC004805.3-201ENST00000603178 310 ntBASIC6.26□□□□□ -1.41
PCDH1Q08174 AL162413.1-201ENST00000603198 110 ntBASIC6.26□□□□□ -1.41
PCDH1Q08174 AC020910.2-201ENST00000603635 610 ntBASIC6.26□□□□□ -1.41
PCDH1Q08174 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.26□□□□□ -1.41
PCDH1Q08174 AL451049.1-201ENST00000608672 497 ntBASIC6.26□□□□□ -1.41
PCDH1Q08174 Y_RNA.812-201ENST00000610788 101 ntBASIC6.26□□□□□ -1.41
PCDH1Q08174 Y_RNA.784-201ENST00000613803 101 ntBASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms