Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.42□□□□□ -1.86
HIST1H1AQ02539 ISCUP1-201ENST00000454451 448 ntBASIC3.42□□□□□ -1.86
HIST1H1AQ02539 TSACC-207ENST00000470342 601 ntTSL 2 BASIC3.42□□□□□ -1.86
HIST1H1AQ02539 AC004453.1-201ENST00000487895 408 ntBASIC3.42□□□□□ -1.86
HIST1H1AQ02539 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.42□□□□□ -1.86
HIST1H1AQ02539 SNORD116-26-201ENST00000516006 96 ntBASIC3.42□□□□□ -1.86
HIST1H1AQ02539 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC3.42□□□□□ -1.86
HIST1H1AQ02539 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC3.42□□□□□ -1.86
HIST1H1AQ02539 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.42□□□□□ -1.86
HIST1H1AQ02539 AC091515.1-201ENST00000548110 679 ntBASIC3.42□□□□□ -1.86
HIST1H1AQ02539 AL110118.1-201ENST00000553543 400 ntBASIC3.42□□□□□ -1.86
HIST1H1AQ02539 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC3.42□□□□□ -1.86
HIST1H1AQ02539 AC044860.2-201ENST00000561005 179 ntBASIC3.42□□□□□ -1.86
HIST1H1AQ02539 RN7SL753P-201ENST00000581238 290 ntBASIC3.42□□□□□ -1.86
HIST1H1AQ02539 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC3.42□□□□□ -1.86
HIST1H1AQ02539 ADAD1P2-201ENST00000588476 646 ntBASIC3.42□□□□□ -1.86
HIST1H1AQ02539 VN1R79P-201ENST00000593540 513 ntBASIC3.42□□□□□ -1.86
HIST1H1AQ02539 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
HIST1H1AQ02539 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.42□□□□□ -1.86
HIST1H1AQ02539 AC116447.1-201ENST00000613153 453 ntBASIC3.42□□□□□ -1.86
HIST1H1AQ02539 AL138721.1-201ENST00000616756 179 ntBASIC3.42□□□□□ -1.86
HIST1H1AQ02539 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HIST1H1AQ02539 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HIST1H1AQ02539 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HIST1H1AQ02539 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.42□□□□□ -1.86
HIST1H1AQ02539 AC135352.1-201ENST00000506173 1418 ntBASIC3.42□□□□□ -1.86
HIST1H1AQ02539 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.42□□□□□ -1.86
HIST1H1AQ02539 ZNF137P-201ENST00000456718 1920 ntBASIC3.42□□□□□ -1.86
HIST1H1AQ02539 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
HIST1H1AQ02539 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HIST1H1AQ02539 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HIST1H1AQ02539 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
HIST1H1AQ02539 AP001486.2-201ENST00000561652 5113 ntBASIC3.41□□□□□ -1.86
HIST1H1AQ02539 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.41□□□□□ -1.86
HIST1H1AQ02539 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HIST1H1AQ02539 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
HIST1H1AQ02539 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HIST1H1AQ02539 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HIST1H1AQ02539 AC053481.2-202ENST00000582394 1500 ntBASIC3.41□□□□□ -1.86
HIST1H1AQ02539 AC067945.1-201ENST00000342609 618 ntBASIC3.41□□□□□ -1.86
HIST1H1AQ02539 SNORA62.2-201ENST00000364672 152 ntBASIC3.41□□□□□ -1.86
HIST1H1AQ02539 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HIST1H1AQ02539 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HIST1H1AQ02539 OR51B3P-201ENST00000412287 913 ntBASIC3.41□□□□□ -1.86
HIST1H1AQ02539 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HIST1H1AQ02539 RPL6P29-201ENST00000414863 865 ntBASIC3.41□□□□□ -1.86
HIST1H1AQ02539 ELOCP8-201ENST00000439309 332 ntBASIC3.41□□□□□ -1.86
HIST1H1AQ02539 ELOCP15-201ENST00000442090 332 ntBASIC3.41□□□□□ -1.86
HIST1H1AQ02539 AC092905.1-201ENST00000467527 949 ntBASIC3.41□□□□□ -1.86
HIST1H1AQ02539 RN7SL177P-201ENST00000476596 299 ntBASIC3.41□□□□□ -1.86
HIST1H1AQ02539 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.41□□□□□ -1.86
HIST1H1AQ02539 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC3.41□□□□□ -1.86
HIST1H1AQ02539 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.41□□□□□ -1.86
HIST1H1AQ02539 MIR2114-201ENST00000516645 80 ntBASIC3.41□□□□□ -1.86
HIST1H1AQ02539 IGKV2D-23-201ENST00000518179 286 ntBASIC3.41□□□□□ -1.86
HIST1H1AQ02539 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.41□□□□□ -1.86
HIST1H1AQ02539 CARD16-203ENST00000525374 503 ntTSL 3 BASIC3.41□□□□□ -1.86
HIST1H1AQ02539 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC3.41□□□□□ -1.86
HIST1H1AQ02539 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.41□□□□□ -1.86
HIST1H1AQ02539 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.41□□□□□ -1.86
HIST1H1AQ02539 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC3.41□□□□□ -1.86
HIST1H1AQ02539 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC3.41□□□□□ -1.86
HIST1H1AQ02539 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC3.41□□□□□ -1.86
HIST1H1AQ02539 MIR3934-201ENST00000579806 107 ntBASIC3.41□□□□□ -1.86
HIST1H1AQ02539 OR7E18P-201ENST00000592589 702 ntBASIC3.41□□□□□ -1.86
HIST1H1AQ02539 BNIP3P32-201ENST00000600015 554 ntBASIC3.41□□□□□ -1.86
HIST1H1AQ02539 AC010680.3-201ENST00000604215 520 ntBASIC3.41□□□□□ -1.86
HIST1H1AQ02539 AC098935.2-201ENST00000604222 466 ntBASIC3.41□□□□□ -1.86
HIST1H1AQ02539 AC005084.1-201ENST00000605160 304 ntBASIC3.41□□□□□ -1.86
HIST1H1AQ02539 AP000894.4-201ENST00000610185 483 ntBASIC3.41□□□□□ -1.86
HIST1H1AQ02539 TEX41-256ENST00000626411 368 ntTSL 5 BASIC3.41□□□□□ -1.86
HIST1H1AQ02539 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.41□□□□□ -1.86
HIST1H1AQ02539 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.41□□□□□ -1.86
HIST1H1AQ02539 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.41□□□□□ -1.86
HIST1H1AQ02539 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
HIST1H1AQ02539 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.41□□□□□ -1.86
HIST1H1AQ02539 AC105074.1-201ENST00000623380 3095 ntBASIC3.41□□□□□ -1.86
HIST1H1AQ02539 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.41□□□□□ -1.86
HIST1H1AQ02539 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HIST1H1AQ02539 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.41□□□□□ -1.86
HIST1H1AQ02539 AC131971.1-201ENST00000332881 1482 ntBASIC3.41□□□□□ -1.86
HIST1H1AQ02539 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.4□□□□□ -1.86
HIST1H1AQ02539 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
HIST1H1AQ02539 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
HIST1H1AQ02539 NXPH1-205ENST00000602349 1953 ntBASIC3.4□□□□□ -1.86
HIST1H1AQ02539 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
HIST1H1AQ02539 RNU1-63P-201ENST00000383902 164 ntBASIC3.4□□□□□ -1.87
HIST1H1AQ02539 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
HIST1H1AQ02539 AL645927.1-201ENST00000396783 406 ntBASIC3.4□□□□□ -1.87
HIST1H1AQ02539 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC3.4□□□□□ -1.87
HIST1H1AQ02539 RN7SKP100-201ENST00000411258 284 ntBASIC3.4□□□□□ -1.87
HIST1H1AQ02539 RNU6-603P-201ENST00000411403 107 ntBASIC3.4□□□□□ -1.87
HIST1H1AQ02539 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.4□□□□□ -1.87
HIST1H1AQ02539 SLC9B1P4-201ENST00000421957 1288 ntBASIC3.4□□□□□ -1.87
HIST1H1AQ02539 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC3.4□□□□□ -1.87
HIST1H1AQ02539 MTND2P2-201ENST00000434633 945 ntBASIC3.4□□□□□ -1.87
HIST1H1AQ02539 CYCSP11-201ENST00000436426 315 ntBASIC3.4□□□□□ -1.87
HIST1H1AQ02539 AC005154.2-201ENST00000438110 379 ntBASIC3.4□□□□□ -1.87
HIST1H1AQ02539 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HIST1H1AQ02539 PTMAP6-201ENST00000439110 327 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms