Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.93□□□□□ -1.62
RAE1P78406 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC4.93□□□□□ -1.62
RAE1P78406 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.93□□□□□ -1.62
RAE1P78406 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC4.93□□□□□ -1.62
RAE1P78406 AC027026.1-201ENST00000532323 742 ntBASIC4.93□□□□□ -1.62
RAE1P78406 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC4.93□□□□□ -1.62
RAE1P78406 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.93□□□□□ -1.62
RAE1P78406 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.93□□□□□ -1.62
RAE1P78406 AC008015.1-201ENST00000555505 465 ntBASIC4.93□□□□□ -1.62
RAE1P78406 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.93□□□□□ -1.62
RAE1P78406 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.93□□□□□ -1.62
RAE1P78406 AC010620.1-201ENST00000601088 1102 ntBASIC4.93□□□□□ -1.62
RAE1P78406 AC121247.2-201ENST00000604776 136 ntBASIC4.93□□□□□ -1.62
RAE1P78406 AL158042.1-201ENST00000605338 460 ntBASIC4.93□□□□□ -1.62
RAE1P78406 AC069545.1-201ENST00000605671 358 ntBASIC4.93□□□□□ -1.62
RAE1P78406 AC080013.3-201ENST00000606839 578 ntBASIC4.93□□□□□ -1.62
RAE1P78406 AC245008.1-201ENST00000608123 476 ntBASIC4.93□□□□□ -1.62
RAE1P78406 AC055764.2-201ENST00000610089 670 ntBASIC4.93□□□□□ -1.62
RAE1P78406 AC079395.2-201ENST00000610982 737 ntBASIC4.93□□□□□ -1.62
RAE1P78406 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
RAE1P78406 AL157770.1-201ENST00000623049 439 ntBASIC4.93□□□□□ -1.62
RAE1P78406 AC139792.2-201ENST00000624218 587 ntBASIC4.93□□□□□ -1.62
RAE1P78406 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.93□□□□□ -1.62
RAE1P78406 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RAE1P78406 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
RAE1P78406 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
RAE1P78406 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RAE1P78406 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.93□□□□□ -1.62
RAE1P78406 AC068870.3-201ENST00000625077 2536 ntBASIC4.93□□□□□ -1.62
RAE1P78406 RNF6P1-201ENST00000444889 1784 ntBASIC4.93□□□□□ -1.62
RAE1P78406 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RAE1P78406 MTND4P31-201ENST00000425607 1343 ntBASIC4.93□□□□□ -1.62
RAE1P78406 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC4.93□□□□□ -1.62
RAE1P78406 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
RAE1P78406 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RAE1P78406 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
RAE1P78406 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
RAE1P78406 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.92□□□□□ -1.62
RAE1P78406 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RAE1P78406 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RAE1P78406 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RAE1P78406 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RAE1P78406 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.92□□□□□ -1.62
RAE1P78406 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
RAE1P78406 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RAE1P78406 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RAE1P78406 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
RAE1P78406 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RAE1P78406 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
RAE1P78406 Y_RNA.192-201ENST00000363977 102 ntBASIC4.92□□□□□ -1.62
RAE1P78406 RNU6-560P-201ENST00000364007 108 ntBASIC4.92□□□□□ -1.62
RAE1P78406 AL035079.1-201ENST00000405210 287 ntBASIC4.92□□□□□ -1.62
RAE1P78406 SNORA11.5-201ENST00000408163 128 ntBASIC4.92□□□□□ -1.62
RAE1P78406 MIR1182-201ENST00000408363 97 ntBASIC4.92□□□□□ -1.62
RAE1P78406 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.92□□□□□ -1.62
RAE1P78406 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.92□□□□□ -1.62
RAE1P78406 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.92□□□□□ -1.62
RAE1P78406 AC114814.2-201ENST00000419195 485 ntBASIC4.92□□□□□ -1.62
RAE1P78406 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.92□□□□□ -1.62
RAE1P78406 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.92□□□□□ -1.62
RAE1P78406 AC007435.1-201ENST00000421086 415 ntBASIC4.92□□□□□ -1.62
RAE1P78406 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.92□□□□□ -1.62
RAE1P78406 AC093655.2-201ENST00000425735 631 ntBASIC4.92□□□□□ -1.62
RAE1P78406 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.92□□□□□ -1.62
RAE1P78406 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.92□□□□□ -1.62
RAE1P78406 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.92□□□□□ -1.62
RAE1P78406 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.92□□□□□ -1.62
RAE1P78406 AC079776.3-201ENST00000450665 370 ntBASIC4.92□□□□□ -1.62
RAE1P78406 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC4.92□□□□□ -1.62
RAE1P78406 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.92□□□□□ -1.62
RAE1P78406 RPL7P51-201ENST00000490532 749 ntBASIC4.92□□□□□ -1.62
RAE1P78406 EIF3LP3-201ENST00000495197 822 ntBASIC4.92□□□□□ -1.62
RAE1P78406 AC108693.1-201ENST00000496068 432 ntBASIC4.92□□□□□ -1.62
RAE1P78406 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RAE1P78406 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.92□□□□□ -1.62
RAE1P78406 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.92□□□□□ -1.62
RAE1P78406 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.92□□□□□ -1.62
RAE1P78406 IGKV3D-34-201ENST00000522638 302 ntBASIC4.92□□□□□ -1.62
RAE1P78406 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.92□□□□□ -1.62
RAE1P78406 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC4.92□□□□□ -1.62
RAE1P78406 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.92□□□□□ -1.62
RAE1P78406 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC4.92□□□□□ -1.62
RAE1P78406 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.92□□□□□ -1.62
RAE1P78406 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC4.92□□□□□ -1.62
RAE1P78406 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
RAE1P78406 DUXAP1-201ENST00000556632 463 ntBASIC4.92□□□□□ -1.62
RAE1P78406 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.92□□□□□ -1.62
RAE1P78406 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.92□□□□□ -1.62
RAE1P78406 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.92□□□□□ -1.62
RAE1P78406 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.92□□□□□ -1.62
RAE1P78406 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.92□□□□□ -1.62
RAE1P78406 AC090312.2-201ENST00000582687 378 ntBASIC4.92□□□□□ -1.62
RAE1P78406 FKBP1AP1-201ENST00000594588 318 ntBASIC4.92□□□□□ -1.62
RAE1P78406 AC110760.3-201ENST00000598794 467 ntBASIC4.92□□□□□ -1.62
RAE1P78406 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
RAE1P78406 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.92□□□□□ -1.62
RAE1P78406 AC090527.3-201ENST00000619041 548 ntBASIC4.92□□□□□ -1.62
RAE1P78406 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
RAE1P78406 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.92□□□□□ -1.62
RAE1P78406 AC007671.2-201ENST00000637344 619 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms