Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.25□□□□□ -1.73
VSX2P58304 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
VSX2P58304 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
VSX2P58304 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.25□□□□□ -1.73
VSX2P58304 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.25□□□□□ -1.73
VSX2P58304 HSPD1P14-201ENST00000432666 1618 ntBASIC4.24□□□□□ -1.73
VSX2P58304 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.24□□□□□ -1.73
VSX2P58304 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.24□□□□□ -1.73
VSX2P58304 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
VSX2P58304 AC126755.2-208ENST00000327792 462 ntBASIC4.24□□□□□ -1.73
VSX2P58304 AC138969.1-213ENST00000331436 462 ntBASIC4.24□□□□□ -1.73
VSX2P58304 RPS20P14-201ENST00000412545 360 ntBASIC4.24□□□□□ -1.73
VSX2P58304 RPL21P108-201ENST00000413857 481 ntBASIC4.24□□□□□ -1.73
VSX2P58304 ARAFP1-201ENST00000422172 605 ntBASIC4.24□□□□□ -1.73
VSX2P58304 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.24□□□□□ -1.73
VSX2P58304 AC091390.1-201ENST00000433904 331 ntBASIC4.24□□□□□ -1.73
VSX2P58304 CBX1P1-201ENST00000440184 427 ntBASIC4.24□□□□□ -1.73
VSX2P58304 FHP1-201ENST00000442741 703 ntBASIC4.24□□□□□ -1.73
VSX2P58304 RPL21P133-201ENST00000443666 476 ntBASIC4.24□□□□□ -1.73
VSX2P58304 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.24□□□□□ -1.73
VSX2P58304 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.24□□□□□ -1.73
VSX2P58304 PHBP16-201ENST00000446318 950 ntBASIC4.24□□□□□ -1.73
VSX2P58304 AC053481.1-201ENST00000467217 306 ntBASIC4.24□□□□□ -1.73
VSX2P58304 AC092905.1-201ENST00000467527 949 ntBASIC4.24□□□□□ -1.73
VSX2P58304 RN7SL385P-201ENST00000468873 276 ntBASIC4.24□□□□□ -1.73
VSX2P58304 RN7SL817P-201ENST00000480777 288 ntBASIC4.24□□□□□ -1.73
VSX2P58304 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
VSX2P58304 AC093267.1-201ENST00000489176 961 ntBASIC4.24□□□□□ -1.73
VSX2P58304 RPS27AP16-201ENST00000492222 470 ntBASIC4.24□□□□□ -1.73
VSX2P58304 AC025674.1-201ENST00000507074 324 ntBASIC4.24□□□□□ -1.73
VSX2P58304 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.24□□□□□ -1.73
VSX2P58304 RNA5SP446-201ENST00000515955 82 ntBASIC4.24□□□□□ -1.73
VSX2P58304 RN7SKP34-201ENST00000516142 244 ntBASIC4.24□□□□□ -1.73
VSX2P58304 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.24□□□□□ -1.73
VSX2P58304 RPL21P7-201ENST00000557463 483 ntBASIC4.24□□□□□ -1.73
VSX2P58304 MIR6758-201ENST00000620653 63 ntBASIC4.24□□□□□ -1.73
VSX2P58304 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
VSX2P58304 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.24□□□□□ -1.73
VSX2P58304 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
VSX2P58304 AC090017.1-201ENST00000548612 1779 ntBASIC4.24□□□□□ -1.73
VSX2P58304 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
VSX2P58304 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
VSX2P58304 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.24□□□□□ -1.73
VSX2P58304 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
VSX2P58304 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.23□□□□□ -1.73
VSX2P58304 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.23□□□□□ -1.73
VSX2P58304 RLIMP2-201ENST00000427891 1563 ntBASIC4.23□□□□□ -1.73
VSX2P58304 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
VSX2P58304 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
VSX2P58304 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VSX2P58304 AC008033.1-201ENST00000216407 1162 ntBASIC4.23□□□□□ -1.73
VSX2P58304 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VSX2P58304 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
VSX2P58304 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.23□□□□□ -1.73
VSX2P58304 RPL32P3-201ENST00000359025 275 ntBASIC4.23□□□□□ -1.73
VSX2P58304 RNA5SP372-201ENST00000390836 115 ntBASIC4.23□□□□□ -1.73
VSX2P58304 RNU6-1320P-201ENST00000390838 107 ntBASIC4.23□□□□□ -1.73
VSX2P58304 RNU6-1269P-201ENST00000391139 107 ntBASIC4.23□□□□□ -1.73
VSX2P58304 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
VSX2P58304 FABP12P1-201ENST00000401911 322 ntBASIC4.23□□□□□ -1.73
VSX2P58304 AL139039.2-201ENST00000407436 479 ntBASIC4.23□□□□□ -1.73
VSX2P58304 P2RY10P2-201ENST00000416730 913 ntBASIC4.23□□□□□ -1.73
VSX2P58304 OR2X1P-201ENST00000421144 687 ntBASIC4.23□□□□□ -1.73
VSX2P58304 AL592293.2-201ENST00000422292 996 ntBASIC4.23□□□□□ -1.73
VSX2P58304 EIF2S2P3-201ENST00000428356 999 ntBASIC4.23□□□□□ -1.73
VSX2P58304 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.23□□□□□ -1.73
VSX2P58304 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.23□□□□□ -1.73
VSX2P58304 EIF2S2P2-201ENST00000447161 982 ntBASIC4.23□□□□□ -1.73
VSX2P58304 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.23□□□□□ -1.73
VSX2P58304 RPL7P32-201ENST00000457119 744 ntBASIC4.23□□□□□ -1.73
VSX2P58304 RNU6-599P-201ENST00000459383 107 ntBASIC4.23□□□□□ -1.73
VSX2P58304 RNU6-1193P-201ENST00000459461 107 ntBASIC4.23□□□□□ -1.73
VSX2P58304 RN7SL810P-201ENST00000493031 276 ntBASIC4.23□□□□□ -1.73
VSX2P58304 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.23□□□□□ -1.73
VSX2P58304 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.23□□□□□ -1.73
VSX2P58304 AC010476.1-201ENST00000519111 851 ntBASIC4.23□□□□□ -1.73
VSX2P58304 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC4.23□□□□□ -1.73
VSX2P58304 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.23□□□□□ -1.73
VSX2P58304 OR8G5-201ENST00000524943 1041 ntBASIC4.23□□□□□ -1.73
VSX2P58304 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.23□□□□□ -1.73
VSX2P58304 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.23□□□□□ -1.73
VSX2P58304 RNU6-368P-201ENST00000620928 107 ntBASIC4.23□□□□□ -1.73
VSX2P58304 RNU6-538P-201ENST00000622329 107 ntBASIC4.23□□□□□ -1.73
VSX2P58304 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.23□□□□□ -1.73
VSX2P58304 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
VSX2P58304 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
VSX2P58304 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
VSX2P58304 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VSX2P58304 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VSX2P58304 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
VSX2P58304 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.23□□□□□ -1.73
VSX2P58304 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
VSX2P58304 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
VSX2P58304 AC026951.1-201ENST00000559530 2459 ntBASIC4.22□□□□□ -1.73
VSX2P58304 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
VSX2P58304 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
VSX2P58304 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
VSX2P58304 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.22□□□□□ -1.73
VSX2P58304 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.22□□□□□ -1.73
VSX2P58304 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms