Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC5.6□□□□□ -1.51
GFRA1P56159 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.6□□□□□ -1.51
GFRA1P56159 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC5.6□□□□□ -1.51
GFRA1P56159 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
GFRA1P56159 AC092332.1-201ENST00000563684 829 ntBASIC5.6□□□□□ -1.51
GFRA1P56159 ZNF322P1-201ENST00000568013 1209 ntBASIC5.6□□□□□ -1.51
GFRA1P56159 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.6□□□□□ -1.51
GFRA1P56159 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.6□□□□□ -1.51
GFRA1P56159 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.6□□□□□ -1.51
GFRA1P56159 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.6□□□□□ -1.51
GFRA1P56159 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.6□□□□□ -1.51
GFRA1P56159 MIR6071-201ENST00000616741 78 ntBASIC5.6□□□□□ -1.51
GFRA1P56159 AL158209.2-201ENST00000619266 216 ntBASIC5.6□□□□□ -1.51
GFRA1P56159 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC5.6□□□□□ -1.51
GFRA1P56159 AL157786.1-207ENST00000627771 695 ntBASIC5.6□□□□□ -1.51
GFRA1P56159 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
GFRA1P56159 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
GFRA1P56159 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
GFRA1P56159 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
GFRA1P56159 AC024651.2-201ENST00000562480 2098 ntBASIC5.6□□□□□ -1.51
GFRA1P56159 AC092079.1-201ENST00000558620 1985 ntBASIC5.6□□□□□ -1.51
GFRA1P56159 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
GFRA1P56159 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
GFRA1P56159 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC5.6□□□□□ -1.51
GFRA1P56159 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.6□□□□□ -1.51
GFRA1P56159 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
GFRA1P56159 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
GFRA1P56159 CR848007.1-201ENST00000442354 1699 ntBASIC5.59□□□□□ -1.51
GFRA1P56159 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
GFRA1P56159 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC5.59□□□□□ -1.51
GFRA1P56159 AC006378.2-201ENST00000623178 2476 ntBASIC5.59□□□□□ -1.51
GFRA1P56159 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC5.59□□□□□ -1.51
GFRA1P56159 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
GFRA1P56159 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.59□□□□□ -1.51
GFRA1P56159 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
GFRA1P56159 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
GFRA1P56159 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.59□□□□□ -1.51
GFRA1P56159 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.51
GFRA1P56159 LINC02019-201ENST00000608605 2060 ntBASIC5.59□□□□□ -1.51
GFRA1P56159 AC079097.1-201ENST00000512187 1399 ntBASIC5.59□□□□□ -1.51
GFRA1P56159 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
GFRA1P56159 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.59□□□□□ -1.51
GFRA1P56159 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
GFRA1P56159 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
GFRA1P56159 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
GFRA1P56159 SNORA21-201ENST00000362423 132 ntBASIC5.59□□□□□ -1.51
GFRA1P56159 RNU6-984P-201ENST00000363236 109 ntBASIC5.59□□□□□ -1.51
GFRA1P56159 RNA5SP433-201ENST00000364491 114 ntBASIC5.59□□□□□ -1.51
GFRA1P56159 SNORA43.1-201ENST00000364863 140 ntBASIC5.59□□□□□ -1.51
GFRA1P56159 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
GFRA1P56159 RNU6-533P-201ENST00000384144 107 ntBASIC5.59□□□□□ -1.51
GFRA1P56159 SNORA51.9-201ENST00000384295 124 ntBASIC5.59□□□□□ -1.51
GFRA1P56159 RNU6-809P-201ENST00000384461 107 ntBASIC5.59□□□□□ -1.51
GFRA1P56159 SNORD115-47-201ENST00000391226 86 ntBASIC5.59□□□□□ -1.51
GFRA1P56159 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.59□□□□□ -1.51
GFRA1P56159 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
GFRA1P56159 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.59□□□□□ -1.51
GFRA1P56159 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.59□□□□□ -1.51
GFRA1P56159 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.59□□□□□ -1.51
GFRA1P56159 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC5.59□□□□□ -1.51
GFRA1P56159 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC5.59□□□□□ -1.51
GFRA1P56159 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC5.59□□□□□ -1.51
GFRA1P56159 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC5.59□□□□□ -1.51
GFRA1P56159 LSM1P1-201ENST00000438629 273 ntBASIC5.59□□□□□ -1.51
GFRA1P56159 AL138899.2-201ENST00000439139 499 ntBASIC5.59□□□□□ -1.51
GFRA1P56159 CNOT7P2-201ENST00000441051 832 ntBASIC5.59□□□□□ -1.51
GFRA1P56159 FHP1-201ENST00000442741 703 ntBASIC5.59□□□□□ -1.51
GFRA1P56159 GAPDHP23-201ENST00000444823 993 ntBASIC5.59□□□□□ -1.51
GFRA1P56159 MTCO1P27-201ENST00000448269 226 ntBASIC5.59□□□□□ -1.51
GFRA1P56159 PSPHP1-201ENST00000450062 261 ntBASIC5.59□□□□□ -1.51
GFRA1P56159 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC5.59□□□□□ -1.51
GFRA1P56159 AC002553.3-201ENST00000453002 341 ntBASIC5.59□□□□□ -1.51
GFRA1P56159 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC5.59□□□□□ -1.51
GFRA1P56159 AL672167.3-201ENST00000465951 960 ntBASIC5.59□□□□□ -1.51
GFRA1P56159 AL121769.1-201ENST00000469473 401 ntBASIC5.59□□□□□ -1.51
GFRA1P56159 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.59□□□□□ -1.51
GFRA1P56159 AC109462.1-201ENST00000491087 368 ntBASIC5.59□□□□□ -1.51
GFRA1P56159 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC5.59□□□□□ -1.51
GFRA1P56159 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC5.59□□□□□ -1.51
GFRA1P56159 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC5.59□□□□□ -1.51
GFRA1P56159 RNU6-430P-201ENST00000517078 107 ntBASIC5.59□□□□□ -1.51
GFRA1P56159 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
GFRA1P56159 IGKV3D-25-201ENST00000519599 235 ntBASIC5.59□□□□□ -1.51
GFRA1P56159 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.59□□□□□ -1.51
GFRA1P56159 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.59□□□□□ -1.51
GFRA1P56159 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.59□□□□□ -1.51
GFRA1P56159 CASP1-212ENST00000531166 300 ntTSL 5 BASIC5.59□□□□□ -1.51
GFRA1P56159 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.59□□□□□ -1.51
GFRA1P56159 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC5.59□□□□□ -1.51
GFRA1P56159 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC5.59□□□□□ -1.51
GFRA1P56159 MIR3189-201ENST00000578735 73 ntBASIC5.59□□□□□ -1.51
GFRA1P56159 MIR544B-201ENST00000582372 78 ntBASIC5.59□□□□□ -1.51
GFRA1P56159 SNORD39.3-201ENST00000584451 71 ntBASIC5.59□□□□□ -1.51
GFRA1P56159 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.59□□□□□ -1.51
GFRA1P56159 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.59□□□□□ -1.51
GFRA1P56159 AC067852.5-201ENST00000589299 310 ntBASIC5.59□□□□□ -1.51
GFRA1P56159 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC5.59□□□□□ -1.51
GFRA1P56159 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.59□□□□□ -1.51
GFRA1P56159 AP000894.4-201ENST00000610185 483 ntBASIC5.59□□□□□ -1.51
GFRA1P56159 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms