Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.21□□□□□ -1.74
LIM2P55344 CEACAMP9-201ENST00000442990 513 ntBASIC4.21□□□□□ -1.74
LIM2P55344 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.21□□□□□ -1.74
LIM2P55344 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.21□□□□□ -1.74
LIM2P55344 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.21□□□□□ -1.74
LIM2P55344 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.21□□□□□ -1.74
LIM2P55344 AL133244.1-201ENST00000456007 258 ntBASIC4.21□□□□□ -1.74
LIM2P55344 MTND2P28-201ENST00000457540 1044 ntBASIC4.21□□□□□ -1.74
LIM2P55344 AC096741.1-201ENST00000472250 846 ntBASIC4.21□□□□□ -1.74
LIM2P55344 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.21□□□□□ -1.74
LIM2P55344 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.21□□□□□ -1.74
LIM2P55344 AC012158.1-204ENST00000483430 465 ntBASIC4.21□□□□□ -1.74
LIM2P55344 AC090543.1-201ENST00000492168 485 ntBASIC4.21□□□□□ -1.74
LIM2P55344 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.21□□□□□ -1.74
LIM2P55344 AC108120.2-201ENST00000512973 294 ntBASIC4.21□□□□□ -1.74
LIM2P55344 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.21□□□□□ -1.74
LIM2P55344 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.21□□□□□ -1.74
LIM2P55344 IGLV3-26-201ENST00000520756 302 ntBASIC4.21□□□□□ -1.74
LIM2P55344 AC100770.1-201ENST00000532310 322 ntBASIC4.21□□□□□ -1.74
LIM2P55344 CR383656.6-201ENST00000550518 394 ntBASIC4.21□□□□□ -1.74
LIM2P55344 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.21□□□□□ -1.74
LIM2P55344 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
LIM2P55344 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.21□□□□□ -1.74
LIM2P55344 MIR4700-201ENST00000578311 74 ntBASIC4.21□□□□□ -1.74
LIM2P55344 RN7SL176P-201ENST00000580352 264 ntBASIC4.21□□□□□ -1.74
LIM2P55344 MIR4715-201ENST00000584117 79 ntBASIC4.21□□□□□ -1.74
LIM2P55344 AP001160.4-201ENST00000596971 382 ntBASIC4.21□□□□□ -1.74
LIM2P55344 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.21□□□□□ -1.74
LIM2P55344 AC010201.1-201ENST00000605051 540 ntBASIC4.21□□□□□ -1.74
LIM2P55344 MIR6891-201ENST00000618788 93 ntBASIC4.21□□□□□ -1.74
LIM2P55344 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
LIM2P55344 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.21□□□□□ -1.74
LIM2P55344 AL596275.2-204ENST00000641628 552 ntBASIC4.21□□□□□ -1.74
LIM2P55344 AL596275.2-206ENST00000641957 626 ntBASIC4.21□□□□□ -1.74
LIM2P55344 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.21□□□□□ -1.74
LIM2P55344 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
LIM2P55344 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
LIM2P55344 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
LIM2P55344 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.21□□□□□ -1.74
LIM2P55344 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.21□□□□□ -1.74
LIM2P55344 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.21□□□□□ -1.74
LIM2P55344 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
LIM2P55344 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
LIM2P55344 AC006971.1-201ENST00000407916 4486 ntBASIC4.21□□□□□ -1.74
LIM2P55344 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
LIM2P55344 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.2□□□□□ -1.74
LIM2P55344 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.2□□□□□ -1.74
LIM2P55344 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.2□□□□□ -1.74
LIM2P55344 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LIM2P55344 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LIM2P55344 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.2□□□□□ -1.74
LIM2P55344 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
LIM2P55344 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LIM2P55344 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
LIM2P55344 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.2□□□□□ -1.74
LIM2P55344 RNU1-130P-201ENST00000363930 160 ntBASIC4.2□□□□□ -1.74
LIM2P55344 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC4.2□□□□□ -1.74
LIM2P55344 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
LIM2P55344 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
LIM2P55344 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.2□□□□□ -1.74
LIM2P55344 RPL26P37-201ENST00000411983 438 ntBASIC4.2□□□□□ -1.74
LIM2P55344 AL356387.2-201ENST00000422272 243 ntBASIC4.2□□□□□ -1.74
LIM2P55344 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.2□□□□□ -1.74
LIM2P55344 CNOT7P1-201ENST00000429006 852 ntBASIC4.2□□□□□ -1.74
LIM2P55344 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.2□□□□□ -1.74
LIM2P55344 RPL12P28-201ENST00000430852 489 ntBASIC4.2□□□□□ -1.74
LIM2P55344 CDY14P-201ENST00000431260 1014 ntBASIC4.2□□□□□ -1.74
LIM2P55344 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.2□□□□□ -1.74
LIM2P55344 FTH1P16-201ENST00000435241 552 ntBASIC4.2□□□□□ -1.74
LIM2P55344 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LIM2P55344 CDY12P-201ENST00000440679 1015 ntBASIC4.2□□□□□ -1.74
LIM2P55344 CDY13P-201ENST00000445813 1015 ntBASIC4.2□□□□□ -1.74
LIM2P55344 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.2□□□□□ -1.74
LIM2P55344 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.2□□□□□ -1.74
LIM2P55344 CDY23P-201ENST00000451661 1014 ntBASIC4.2□□□□□ -1.74
LIM2P55344 VN1R32P-201ENST00000452234 905 ntBASIC4.2□□□□□ -1.74
LIM2P55344 DDX39BP2-208ENST00000453923 258 ntBASIC4.2□□□□□ -1.74
LIM2P55344 AC053481.1-201ENST00000467217 306 ntBASIC4.2□□□□□ -1.74
LIM2P55344 AC092905.1-201ENST00000467527 949 ntBASIC4.2□□□□□ -1.74
LIM2P55344 AC022795.1-201ENST00000473808 480 ntBASIC4.2□□□□□ -1.74
LIM2P55344 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.2□□□□□ -1.74
LIM2P55344 STMN1P2-201ENST00000508435 439 ntBASIC4.2□□□□□ -1.74
LIM2P55344 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.2□□□□□ -1.74
LIM2P55344 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LIM2P55344 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.2□□□□□ -1.74
LIM2P55344 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.2□□□□□ -1.74
LIM2P55344 RNA5SP228-201ENST00000516232 133 ntBASIC4.2□□□□□ -1.74
LIM2P55344 RNU6-889P-201ENST00000517189 103 ntBASIC4.2□□□□□ -1.74
LIM2P55344 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.2□□□□□ -1.74
LIM2P55344 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.2□□□□□ -1.74
LIM2P55344 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.2□□□□□ -1.74
LIM2P55344 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.2□□□□□ -1.74
LIM2P55344 SNRPGP1-201ENST00000553864 222 ntBASIC4.2□□□□□ -1.74
LIM2P55344 SETP1-201ENST00000556014 845 ntBASIC4.2□□□□□ -1.74
LIM2P55344 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.2□□□□□ -1.74
LIM2P55344 DPRXP4-201ENST00000578053 568 ntBASIC4.2□□□□□ -1.74
LIM2P55344 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.2□□□□□ -1.74
LIM2P55344 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.2□□□□□ -1.74
LIM2P55344 AL356274.1-201ENST00000617064 410 ntBASIC4.2□□□□□ -1.74
LIM2P55344 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms