Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AC016769.2-201ENST00000414815 475 ntBASIC4.55□□□□□ -1.68
CDH6P55285 TMSB10P2-201ENST00000416049 131 ntBASIC4.55□□□□□ -1.68
CDH6P55285 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.55□□□□□ -1.68
CDH6P55285 RPL23AP1-201ENST00000428990 471 ntBASIC4.55□□□□□ -1.68
CDH6P55285 SKP1P3-201ENST00000429280 487 ntBASIC4.55□□□□□ -1.68
CDH6P55285 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.55□□□□□ -1.68
CDH6P55285 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.55□□□□□ -1.68
CDH6P55285 FTH1P16-201ENST00000435241 552 ntBASIC4.55□□□□□ -1.68
CDH6P55285 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.55□□□□□ -1.68
CDH6P55285 RPL31P53-201ENST00000457065 348 ntBASIC4.55□□□□□ -1.68
CDH6P55285 RPL5P30-201ENST00000465511 891 ntBASIC4.55□□□□□ -1.68
CDH6P55285 LARP7P4-201ENST00000481075 878 ntBASIC4.55□□□□□ -1.68
CDH6P55285 AK3P4-201ENST00000504283 583 ntBASIC4.55□□□□□ -1.68
CDH6P55285 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CDH6P55285 PGBD4P4-201ENST00000509673 613 ntBASIC4.55□□□□□ -1.68
CDH6P55285 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.55□□□□□ -1.68
CDH6P55285 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.55□□□□□ -1.68
CDH6P55285 OR5AN2P-201ENST00000534535 896 ntBASIC4.55□□□□□ -1.68
CDH6P55285 AC125612.1-201ENST00000547580 377 ntBASIC4.55□□□□□ -1.68
CDH6P55285 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CDH6P55285 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.55□□□□□ -1.68
CDH6P55285 RN7SL52P-201ENST00000584271 284 ntBASIC4.55□□□□□ -1.68
CDH6P55285 AC117490.2-201ENST00000610042 594 ntBASIC4.55□□□□□ -1.68
CDH6P55285 BX323046.1-201ENST00000610145 535 ntBASIC4.55□□□□□ -1.68
CDH6P55285 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
CDH6P55285 AC002044.3-201ENST00000623314 541 ntBASIC4.55□□□□□ -1.68
CDH6P55285 AC055839.1-201ENST00000634467 498 ntBASIC4.55□□□□□ -1.68
CDH6P55285 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.55□□□□□ -1.68
CDH6P55285 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.55□□□□□ -1.68
CDH6P55285 AC053481.2-202ENST00000582394 1500 ntBASIC4.55□□□□□ -1.68
CDH6P55285 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.55□□□□□ -1.68
CDH6P55285 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDH6P55285 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CDH6P55285 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CDH6P55285 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
CDH6P55285 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CDH6P55285 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
CDH6P55285 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDH6P55285 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CDH6P55285 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDH6P55285 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.54□□□□□ -1.68
CDH6P55285 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDH6P55285 RNU1-15P-201ENST00000353977 144 ntBASIC4.54□□□□□ -1.68
CDH6P55285 RNA5SP332-201ENST00000391063 115 ntBASIC4.54□□□□□ -1.68
CDH6P55285 RPL37P18-201ENST00000411602 243 ntBASIC4.54□□□□□ -1.68
CDH6P55285 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.54□□□□□ -1.68
CDH6P55285 AL139095.3-201ENST00000419672 1203 ntBASIC4.54□□□□□ -1.68
CDH6P55285 CASP3P1-201ENST00000446037 609 ntBASIC4.54□□□□□ -1.68
CDH6P55285 AC099063.2-201ENST00000446360 662 ntBASIC4.54□□□□□ -1.68
CDH6P55285 DHFRP3-201ENST00000455595 559 ntBASIC4.54□□□□□ -1.68
CDH6P55285 RPL35AP15-201ENST00000468042 339 ntBASIC4.54□□□□□ -1.68
CDH6P55285 CCDC75P1-201ENST00000469247 791 ntBASIC4.54□□□□□ -1.68
CDH6P55285 RN7SL812P-201ENST00000493791 279 ntBASIC4.54□□□□□ -1.68
CDH6P55285 AC093720.1-201ENST00000505681 714 ntBASIC4.54□□□□□ -1.68
CDH6P55285 STMN1P2-201ENST00000508435 439 ntBASIC4.54□□□□□ -1.68
CDH6P55285 AC015795.1-201ENST00000513669 327 ntBASIC4.54□□□□□ -1.68
CDH6P55285 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.54□□□□□ -1.68
CDH6P55285 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.54□□□□□ -1.68
CDH6P55285 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.54□□□□□ -1.68
CDH6P55285 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.54□□□□□ -1.68
CDH6P55285 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.54□□□□□ -1.68
CDH6P55285 OR5BC1P-201ENST00000529327 739 ntBASIC4.54□□□□□ -1.68
CDH6P55285 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.54□□□□□ -1.68
CDH6P55285 AC020915.5-201ENST00000596836 964 ntBASIC4.54□□□□□ -1.68
CDH6P55285 AC079587.1-201ENST00000603846 277 ntBASIC4.54□□□□□ -1.68
CDH6P55285 AC012409.3-201ENST00000611343 981 ntBASIC4.54□□□□□ -1.68
CDH6P55285 FP325313.1-201ENST00000638228 703 ntBASIC4.54□□□□□ -1.68
CDH6P55285 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.54□□□□□ -1.68
CDH6P55285 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDH6P55285 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CDH6P55285 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CDH6P55285 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.54□□□□□ -1.68
CDH6P55285 AC007342.7-201ENST00000624610 2337 ntBASIC4.54□□□□□ -1.68
CDH6P55285 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDH6P55285 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CDH6P55285 AC015813.6-201ENST00000624409 5808 ntBASIC4.53□□□□□ -1.68
CDH6P55285 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDH6P55285 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDH6P55285 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.53□□□□□ -1.68
CDH6P55285 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDH6P55285 AL034403.1-201ENST00000399414 885 ntBASIC4.53□□□□□ -1.68
CDH6P55285 AC097374.1-203ENST00000400783 485 ntBASIC4.53□□□□□ -1.68
CDH6P55285 RNA5SP146-201ENST00000410743 123 ntBASIC4.53□□□□□ -1.68
CDH6P55285 MTCYBP7-201ENST00000419540 1134 ntBASIC4.53□□□□□ -1.68
CDH6P55285 AC245028.1-201ENST00000423259 256 ntBASIC4.53□□□□□ -1.68
CDH6P55285 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.53□□□□□ -1.68
CDH6P55285 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.53□□□□□ -1.68
CDH6P55285 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.53□□□□□ -1.68
CDH6P55285 TXNP2-201ENST00000443918 295 ntBASIC4.53□□□□□ -1.68
CDH6P55285 GEMIN8P3-201ENST00000445417 720 ntBASIC4.53□□□□□ -1.68
CDH6P55285 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.53□□□□□ -1.68
CDH6P55285 AC073587.1-201ENST00000447093 876 ntBASIC4.53□□□□□ -1.68
CDH6P55285 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.53□□□□□ -1.68
CDH6P55285 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.53□□□□□ -1.68
CDH6P55285 RN7SL205P-201ENST00000490174 284 ntBASIC4.53□□□□□ -1.68
CDH6P55285 MTCO3P42-201ENST00000509488 518 ntBASIC4.53□□□□□ -1.68
CDH6P55285 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.53□□□□□ -1.68
CDH6P55285 MTCO3P39-201ENST00000514812 518 ntBASIC4.53□□□□□ -1.68
CDH6P55285 IGLVIV-65-201ENST00000517313 360 ntBASIC4.53□□□□□ -1.68
CDH6P55285 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms