Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.64□□□□□ -1.67
LIMK2P53671 AC108022.1-201ENST00000493466 478 ntBASIC4.64□□□□□ -1.67
LIMK2P53671 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.64□□□□□ -1.67
LIMK2P53671 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.64□□□□□ -1.67
LIMK2P53671 HAUS1P1-201ENST00000505275 832 ntBASIC4.64□□□□□ -1.67
LIMK2P53671 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.64□□□□□ -1.67
LIMK2P53671 AC111000.3-201ENST00000508057 576 ntBASIC4.64□□□□□ -1.67
LIMK2P53671 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.64□□□□□ -1.67
LIMK2P53671 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
LIMK2P53671 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LIMK2P53671 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.64□□□□□ -1.67
LIMK2P53671 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.64□□□□□ -1.67
LIMK2P53671 AC105129.1-201ENST00000560250 297 ntBASIC4.64□□□□□ -1.67
LIMK2P53671 AC084759.1-201ENST00000561168 290 ntBASIC4.64□□□□□ -1.67
LIMK2P53671 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.64□□□□□ -1.67
LIMK2P53671 AC027455.1-201ENST00000574104 594 ntBASIC4.64□□□□□ -1.67
LIMK2P53671 MIR4284-201ENST00000578924 81 ntBASIC4.64□□□□□ -1.67
LIMK2P53671 AC005972.3-201ENST00000606304 481 ntBASIC4.64□□□□□ -1.67
LIMK2P53671 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.64□□□□□ -1.67
LIMK2P53671 OR5AC4P-202ENST00000642086 985 ntBASIC4.64□□□□□ -1.67
LIMK2P53671 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.64□□□□□ -1.67
LIMK2P53671 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LIMK2P53671 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.64□□□□□ -1.67
LIMK2P53671 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LIMK2P53671 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.64□□□□□ -1.67
LIMK2P53671 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
LIMK2P53671 DDX6P1-205ENST00000441966 1436 ntBASIC4.63□□□□□ -1.67
LIMK2P53671 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.63□□□□□ -1.67
LIMK2P53671 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LIMK2P53671 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.63□□□□□ -1.67
LIMK2P53671 AC005332.5-201ENST00000591222 2919 ntBASIC4.63□□□□□ -1.67
LIMK2P53671 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LIMK2P53671 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
LIMK2P53671 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LIMK2P53671 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.63□□□□□ -1.67
LIMK2P53671 SNORA62-201ENST00000365493 153 ntBASIC4.63□□□□□ -1.67
LIMK2P53671 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC4.63□□□□□ -1.67
LIMK2P53671 SNORA70F-201ENST00000384142 135 ntBASIC4.63□□□□□ -1.67
LIMK2P53671 AL049697.2-201ENST00000403708 294 ntBASIC4.63□□□□□ -1.67
LIMK2P53671 AL590806.1-201ENST00000415818 853 ntBASIC4.63□□□□□ -1.67
LIMK2P53671 AC092017.2-201ENST00000427600 362 ntBASIC4.63□□□□□ -1.67
LIMK2P53671 EIF2S2P3-201ENST00000428356 999 ntBASIC4.63□□□□□ -1.67
LIMK2P53671 CNOT7P1-201ENST00000429006 852 ntBASIC4.63□□□□□ -1.67
LIMK2P53671 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC4.63□□□□□ -1.67
LIMK2P53671 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.63□□□□□ -1.67
LIMK2P53671 RPL21P133-201ENST00000443666 476 ntBASIC4.63□□□□□ -1.67
LIMK2P53671 AL353898.1-201ENST00000444055 238 ntBASIC4.63□□□□□ -1.67
LIMK2P53671 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.63□□□□□ -1.67
LIMK2P53671 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
LIMK2P53671 RPS15AP29-201ENST00000445539 400 ntBASIC4.63□□□□□ -1.67
LIMK2P53671 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.63□□□□□ -1.67
LIMK2P53671 AK3P4-201ENST00000504283 583 ntBASIC4.63□□□□□ -1.67
LIMK2P53671 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.63□□□□□ -1.67
LIMK2P53671 HPRT1P1-201ENST00000509498 657 ntBASIC4.63□□□□□ -1.67
LIMK2P53671 RNU6-467P-201ENST00000517027 110 ntBASIC4.63□□□□□ -1.67
LIMK2P53671 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.63□□□□□ -1.67
LIMK2P53671 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.63□□□□□ -1.67
LIMK2P53671 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.63□□□□□ -1.67
LIMK2P53671 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.63□□□□□ -1.67
LIMK2P53671 OR5M2P-201ENST00000529003 936 ntBASIC4.63□□□□□ -1.67
LIMK2P53671 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.63□□□□□ -1.67
LIMK2P53671 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.63□□□□□ -1.67
LIMK2P53671 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.63□□□□□ -1.67
LIMK2P53671 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC4.63□□□□□ -1.67
LIMK2P53671 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
LIMK2P53671 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC4.63□□□□□ -1.67
LIMK2P53671 AC090079.2-201ENST00000575289 768 ntBASIC4.63□□□□□ -1.67
LIMK2P53671 AC124856.1-201ENST00000600819 896 ntBASIC4.63□□□□□ -1.67
LIMK2P53671 AC026979.4-201ENST00000606555 645 ntBASIC4.63□□□□□ -1.67
LIMK2P53671 AC144521.1-201ENST00000607148 956 ntBASIC4.63□□□□□ -1.67
LIMK2P53671 AP001005.3-201ENST00000622049 129 ntBASIC4.63□□□□□ -1.67
LIMK2P53671 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LIMK2P53671 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
LIMK2P53671 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.63□□□□□ -1.67
LIMK2P53671 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.63□□□□□ -1.67
LIMK2P53671 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC4.63□□□□□ -1.67
LIMK2P53671 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
LIMK2P53671 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.63□□□□□ -1.67
LIMK2P53671 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.63□□□□□ -1.67
LIMK2P53671 AL132640.2-201ENST00000559968 1698 ntBASIC4.63□□□□□ -1.67
LIMK2P53671 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LIMK2P53671 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LIMK2P53671 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LIMK2P53671 AC135352.1-201ENST00000506173 1418 ntBASIC4.63□□□□□ -1.67
LIMK2P53671 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
LIMK2P53671 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
LIMK2P53671 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LIMK2P53671 AC000123.3-201ENST00000624029 4975 ntBASIC4.62□□□□□ -1.67
LIMK2P53671 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LIMK2P53671 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
LIMK2P53671 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LIMK2P53671 CASC19-204ENST00000641001 2055 ntBASIC4.62□□□□□ -1.67
LIMK2P53671 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
LIMK2P53671 BMS1P3-201ENST00000372011 932 ntBASIC4.62□□□□□ -1.67
LIMK2P53671 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
LIMK2P53671 FABP12P1-201ENST00000401911 322 ntBASIC4.62□□□□□ -1.67
LIMK2P53671 RN7SKP247-201ENST00000411094 308 ntBASIC4.62□□□□□ -1.67
LIMK2P53671 RPL21P108-201ENST00000413857 481 ntBASIC4.62□□□□□ -1.67
LIMK2P53671 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
LIMK2P53671 RPS27AP7-201ENST00000422792 455 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 149.1 ms