Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PDX1P52945 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.66□□□□□ -1.66
PDX1P52945 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
PDX1P52945 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.65□□□□□ -1.66
PDX1P52945 AC019072.1-201ENST00000604535 1551 ntBASIC4.65□□□□□ -1.66
PDX1P52945 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.65□□□□□ -1.66
PDX1P52945 AL731532.2-201ENST00000623542 1953 ntBASIC4.65□□□□□ -1.66
PDX1P52945 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
PDX1P52945 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
PDX1P52945 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.65□□□□□ -1.66
PDX1P52945 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
PDX1P52945 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
PDX1P52945 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.65□□□□□ -1.66
PDX1P52945 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
PDX1P52945 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.65□□□□□ -1.66
PDX1P52945 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
PDX1P52945 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
PDX1P52945 RN7SKP74-201ENST00000362849 309 ntBASIC4.65□□□□□ -1.67
PDX1P52945 HMGB1P10-201ENST00000395823 563 ntBASIC4.65□□□□□ -1.67
PDX1P52945 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.65□□□□□ -1.67
PDX1P52945 OR5M12P-201ENST00000423388 929 ntBASIC4.65□□□□□ -1.67
PDX1P52945 PNRC2P1-201ENST00000423940 420 ntBASIC4.65□□□□□ -1.67
PDX1P52945 RSL24D1P6-201ENST00000426934 401 ntBASIC4.65□□□□□ -1.67
PDX1P52945 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC4.65□□□□□ -1.67
PDX1P52945 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.65□□□□□ -1.67
PDX1P52945 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC4.65□□□□□ -1.67
PDX1P52945 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.65□□□□□ -1.67
PDX1P52945 AC016831.4-201ENST00000438302 307 ntBASIC4.65□□□□□ -1.67
PDX1P52945 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4.65□□□□□ -1.67
PDX1P52945 AC009963.2-201ENST00000453431 138 ntBASIC4.65□□□□□ -1.67
PDX1P52945 RPS5P7-201ENST00000456664 608 ntBASIC4.65□□□□□ -1.67
PDX1P52945 FCF1P6-201ENST00000456841 595 ntBASIC4.65□□□□□ -1.67
PDX1P52945 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.65□□□□□ -1.67
PDX1P52945 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
PDX1P52945 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC4.65□□□□□ -1.67
PDX1P52945 SETP6-201ENST00000479329 568 ntBASIC4.65□□□□□ -1.67
PDX1P52945 AC069304.1-201ENST00000491593 704 ntBASIC4.65□□□□□ -1.67
PDX1P52945 AC073073.1-201ENST00000493920 463 ntBASIC4.65□□□□□ -1.67
PDX1P52945 OR5H3P-201ENST00000502817 919 ntBASIC4.65□□□□□ -1.67
PDX1P52945 AC093801.2-201ENST00000503966 1050 ntBASIC4.65□□□□□ -1.67
PDX1P52945 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.65□□□□□ -1.67
PDX1P52945 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.65□□□□□ -1.67
PDX1P52945 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.65□□□□□ -1.67
PDX1P52945 RN7SKP122-201ENST00000515923 296 ntBASIC4.65□□□□□ -1.67
PDX1P52945 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.65□□□□□ -1.67
PDX1P52945 OR8X1P-201ENST00000534542 869 ntBASIC4.65□□□□□ -1.67
PDX1P52945 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.65□□□□□ -1.67
PDX1P52945 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.65□□□□□ -1.67
PDX1P52945 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.65□□□□□ -1.67
PDX1P52945 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.65□□□□□ -1.67
PDX1P52945 AC105129.1-201ENST00000560250 297 ntBASIC4.65□□□□□ -1.67
PDX1P52945 MIR4277-201ENST00000578298 84 ntBASIC4.65□□□□□ -1.67
PDX1P52945 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.65□□□□□ -1.67
PDX1P52945 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.65□□□□□ -1.67
PDX1P52945 AC022726.1-201ENST00000587475 207 ntBASIC4.65□□□□□ -1.67
PDX1P52945 AC006116.7-201ENST00000590141 756 ntBASIC4.65□□□□□ -1.67
PDX1P52945 AP003117.1-201ENST00000602771 554 ntBASIC4.65□□□□□ -1.67
PDX1P52945 AC093765.1-201ENST00000603758 881 ntBASIC4.65□□□□□ -1.67
PDX1P52945 AL391834.2-201ENST00000609982 546 ntBASIC4.65□□□□□ -1.67
PDX1P52945 AC018926.1-201ENST00000616335 435 ntBASIC4.65□□□□□ -1.67
PDX1P52945 AC068831.8-201ENST00000620171 435 ntBASIC4.65□□□□□ -1.67
PDX1P52945 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.65□□□□□ -1.67
PDX1P52945 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC4.65□□□□□ -1.67
PDX1P52945 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.65□□□□□ -1.67
PDX1P52945 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
PDX1P52945 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
PDX1P52945 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
PDX1P52945 AL137100.1-201ENST00000556703 1620 ntBASIC4.64□□□□□ -1.67
PDX1P52945 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
PDX1P52945 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PDX1P52945 RBPJP2-201ENST00000618187 1444 ntBASIC4.64□□□□□ -1.67
PDX1P52945 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.64□□□□□ -1.67
PDX1P52945 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.64□□□□□ -1.67
PDX1P52945 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
PDX1P52945 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC4.64□□□□□ -1.67
PDX1P52945 RNU6-249P-201ENST00000363016 102 ntBASIC4.64□□□□□ -1.67
PDX1P52945 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.64□□□□□ -1.67
PDX1P52945 AL049693.1-201ENST00000402760 611 ntBASIC4.64□□□□□ -1.67
PDX1P52945 AL024507.1-201ENST00000412741 274 ntBASIC4.64□□□□□ -1.67
PDX1P52945 MTND2P15-201ENST00000418575 892 ntBASIC4.64□□□□□ -1.67
PDX1P52945 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.64□□□□□ -1.67
PDX1P52945 AL645608.4-201ENST00000423619 154 ntBASIC4.64□□□□□ -1.67
PDX1P52945 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC4.64□□□□□ -1.67
PDX1P52945 RPEP3-201ENST00000425462 676 ntBASIC4.64□□□□□ -1.67
PDX1P52945 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.64□□□□□ -1.67
PDX1P52945 AC022022.1-201ENST00000430304 178 ntBASIC4.64□□□□□ -1.67
PDX1P52945 AP000936.3-201ENST00000438127 255 ntBASIC4.64□□□□□ -1.67
PDX1P52945 RPS27P5-201ENST00000444247 244 ntBASIC4.64□□□□□ -1.67
PDX1P52945 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.64□□□□□ -1.67
PDX1P52945 EIF2S2P2-201ENST00000447161 982 ntBASIC4.64□□□□□ -1.67
PDX1P52945 BTF3P6-201ENST00000448054 499 ntBASIC4.64□□□□□ -1.67
PDX1P52945 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.64□□□□□ -1.67
PDX1P52945 PPM1AP1-201ENST00000502740 1135 ntBASIC4.64□□□□□ -1.67
PDX1P52945 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.64□□□□□ -1.67
PDX1P52945 AC108120.2-201ENST00000512973 294 ntBASIC4.64□□□□□ -1.67
PDX1P52945 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.64□□□□□ -1.67
PDX1P52945 BUD31P1-201ENST00000521828 359 ntBASIC4.64□□□□□ -1.67
PDX1P52945 AC018442.3-201ENST00000523025 183 ntBASIC4.64□□□□□ -1.67
PDX1P52945 AC104115.2-201ENST00000523026 687 ntBASIC4.64□□□□□ -1.67
PDX1P52945 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms