Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 SNRPGP1-201ENST00000553864 222 ntBASIC4.61□□□□□ -1.67
TRIM23P36406 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.61□□□□□ -1.67
TRIM23P36406 AC087477.6-201ENST00000559595 843 ntBASIC4.61□□□□□ -1.67
TRIM23P36406 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.61□□□□□ -1.67
TRIM23P36406 AL021368.1-201ENST00000607490 540 ntBASIC4.61□□□□□ -1.67
TRIM23P36406 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.61□□□□□ -1.67
TRIM23P36406 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
TRIM23P36406 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
TRIM23P36406 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM23P36406 MTND4P26-201ENST00000415971 1359 ntBASIC4.61□□□□□ -1.67
TRIM23P36406 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
TRIM23P36406 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.61□□□□□ -1.67
TRIM23P36406 CASC19-206ENST00000641028 1430 ntBASIC4.61□□□□□ -1.67
TRIM23P36406 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.61□□□□□ -1.67
TRIM23P36406 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.61□□□□□ -1.67
TRIM23P36406 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.61□□□□□ -1.67
TRIM23P36406 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM23P36406 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM23P36406 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
TRIM23P36406 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.6□□□□□ -1.67
TRIM23P36406 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.6□□□□□ -1.67
TRIM23P36406 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
TRIM23P36406 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.6□□□□□ -1.67
TRIM23P36406 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM23P36406 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.6□□□□□ -1.67
TRIM23P36406 AL356489.2-201ENST00000566968 3528 ntBASIC4.6□□□□□ -1.67
TRIM23P36406 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
TRIM23P36406 MIR421-201ENST00000365696 85 ntBASIC4.6□□□□□ -1.67
TRIM23P36406 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC4.6□□□□□ -1.67
TRIM23P36406 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM23P36406 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.6□□□□□ -1.67
TRIM23P36406 AC093719.1-202ENST00000392735 373 ntBASIC4.6□□□□□ -1.67
TRIM23P36406 SDHCP2-201ENST00000398565 501 ntBASIC4.6□□□□□ -1.67
TRIM23P36406 AL603766.1-201ENST00000407763 664 ntBASIC4.6□□□□□ -1.67
TRIM23P36406 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.6□□□□□ -1.67
TRIM23P36406 CNOT7P1-201ENST00000429006 852 ntBASIC4.6□□□□□ -1.67
TRIM23P36406 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.6□□□□□ -1.67
TRIM23P36406 FHP1-201ENST00000442741 703 ntBASIC4.6□□□□□ -1.67
TRIM23P36406 RHEBP2-201ENST00000450289 600 ntBASIC4.6□□□□□ -1.67
TRIM23P36406 CYCSP42-201ENST00000450823 238 ntBASIC4.6□□□□□ -1.67
TRIM23P36406 EIF4A1P11-201ENST00000451239 222 ntBASIC4.6□□□□□ -1.67
TRIM23P36406 AC009220.1-201ENST00000451614 275 ntBASIC4.6□□□□□ -1.67
TRIM23P36406 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.6□□□□□ -1.67
TRIM23P36406 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.6□□□□□ -1.67
TRIM23P36406 RN7SL481P-201ENST00000477764 299 ntBASIC4.6□□□□□ -1.67
TRIM23P36406 AC090686.1-201ENST00000481577 749 ntBASIC4.6□□□□□ -1.67
TRIM23P36406 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.6□□□□□ -1.67
TRIM23P36406 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC4.6□□□□□ -1.67
TRIM23P36406 VWA8P1-201ENST00000510889 176 ntBASIC4.6□□□□□ -1.67
TRIM23P36406 RNA5SP303-201ENST00000516192 130 ntBASIC4.6□□□□□ -1.67
TRIM23P36406 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
TRIM23P36406 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.6□□□□□ -1.67
TRIM23P36406 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.6□□□□□ -1.67
TRIM23P36406 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.6□□□□□ -1.67
TRIM23P36406 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.6□□□□□ -1.67
TRIM23P36406 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.6□□□□□ -1.67
TRIM23P36406 AC093765.1-201ENST00000603758 881 ntBASIC4.6□□□□□ -1.67
TRIM23P36406 AL133338.2-201ENST00000604292 736 ntBASIC4.6□□□□□ -1.67
TRIM23P36406 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.6□□□□□ -1.67
TRIM23P36406 RPL23AP61-201ENST00000623642 466 ntBASIC4.6□□□□□ -1.67
TRIM23P36406 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.6□□□□□ -1.67
TRIM23P36406 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.6□□□□□ -1.67
TRIM23P36406 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
TRIM23P36406 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.6□□□□□ -1.67
TRIM23P36406 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM23P36406 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
TRIM23P36406 AC135352.1-201ENST00000506173 1418 ntBASIC4.6□□□□□ -1.67
TRIM23P36406 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
TRIM23P36406 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.6□□□□□ -1.67
TRIM23P36406 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM23P36406 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM23P36406 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.6□□□□□ -1.67
TRIM23P36406 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
TRIM23P36406 AL359922.3-201ENST00000624779 1670 ntBASIC4.6□□□□□ -1.67
TRIM23P36406 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM23P36406 DDX18P4-201ENST00000511690 1966 ntBASIC4.6□□□□□ -1.67
TRIM23P36406 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM23P36406 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM23P36406 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM23P36406 AL592148.3-201ENST00000608771 2646 ntBASIC4.59□□□□□ -1.67
TRIM23P36406 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.59□□□□□ -1.67
TRIM23P36406 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM23P36406 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.59□□□□□ -1.67
TRIM23P36406 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM23P36406 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM23P36406 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
TRIM23P36406 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM23P36406 RNU4-39P-201ENST00000362455 127 ntBASIC4.59□□□□□ -1.67
TRIM23P36406 RNA5SP28-201ENST00000363841 119 ntBASIC4.59□□□□□ -1.67
TRIM23P36406 SNORA27.3-201ENST00000364937 134 ntBASIC4.59□□□□□ -1.67
TRIM23P36406 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM23P36406 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM23P36406 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM23P36406 MIR141-201ENST00000384975 95 ntBASIC4.59□□□□□ -1.67
TRIM23P36406 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
TRIM23P36406 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.59□□□□□ -1.67
TRIM23P36406 RPL26P37-201ENST00000411983 438 ntBASIC4.59□□□□□ -1.67
TRIM23P36406 KPNA2P2-201ENST00000419546 1489 ntBASIC4.59□□□□□ -1.67
TRIM23P36406 UQCRBP1-201ENST00000421129 336 ntBASIC4.59□□□□□ -1.67
TRIM23P36406 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms