Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.47□□□□□ -1.69
HMGCLP35914 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HMGCLP35914 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.47□□□□□ -1.69
HMGCLP35914 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
HMGCLP35914 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.47□□□□□ -1.69
HMGCLP35914 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
HMGCLP35914 RNU6-152P-201ENST00000384037 107 ntBASIC4.47□□□□□ -1.69
HMGCLP35914 RNA5SP332-201ENST00000391063 115 ntBASIC4.47□□□□□ -1.69
HMGCLP35914 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HMGCLP35914 RPL7AP25-201ENST00000423357 805 ntBASIC4.47□□□□□ -1.69
HMGCLP35914 IPMKP1-201ENST00000425988 855 ntBASIC4.47□□□□□ -1.69
HMGCLP35914 Z99127.2-201ENST00000441426 334 ntBASIC4.47□□□□□ -1.69
HMGCLP35914 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.47□□□□□ -1.69
HMGCLP35914 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HMGCLP35914 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HMGCLP35914 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.47□□□□□ -1.69
HMGCLP35914 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.47□□□□□ -1.69
HMGCLP35914 RPS29P33-201ENST00000456717 146 ntBASIC4.47□□□□□ -1.69
HMGCLP35914 AC053481.1-201ENST00000467217 306 ntBASIC4.47□□□□□ -1.69
HMGCLP35914 RN7SL205P-201ENST00000490174 284 ntBASIC4.47□□□□□ -1.69
HMGCLP35914 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.47□□□□□ -1.69
HMGCLP35914 RNA5SP497-201ENST00000516081 97 ntBASIC4.47□□□□□ -1.69
HMGCLP35914 RNU6-491P-201ENST00000516099 110 ntBASIC4.47□□□□□ -1.69
HMGCLP35914 AC090151.1-201ENST00000520784 730 ntBASIC4.47□□□□□ -1.69
HMGCLP35914 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
HMGCLP35914 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.47□□□□□ -1.69
HMGCLP35914 AL121839.1-201ENST00000556233 1185 ntBASIC4.47□□□□□ -1.69
HMGCLP35914 RPL21P7-201ENST00000557463 483 ntBASIC4.47□□□□□ -1.69
HMGCLP35914 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
HMGCLP35914 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.47□□□□□ -1.69
HMGCLP35914 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.47□□□□□ -1.69
HMGCLP35914 AC103792.1-201ENST00000603591 919 ntBASIC4.47□□□□□ -1.69
HMGCLP35914 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.47□□□□□ -1.69
HMGCLP35914 AC012409.3-201ENST00000611343 981 ntBASIC4.47□□□□□ -1.69
HMGCLP35914 RN7SL722P-201ENST00000617780 284 ntBASIC4.47□□□□□ -1.69
HMGCLP35914 RN7SL565P-201ENST00000618246 284 ntBASIC4.47□□□□□ -1.69
HMGCLP35914 MIR6891-201ENST00000618788 93 ntBASIC4.47□□□□□ -1.69
HMGCLP35914 AC006213.5-201ENST00000619673 288 ntBASIC4.47□□□□□ -1.69
HMGCLP35914 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
HMGCLP35914 OR2L1P-202ENST00000641567 1023 ntBASIC4.47□□□□□ -1.69
HMGCLP35914 Z98755.1-201ENST00000407015 1384 ntBASIC4.47□□□□□ -1.69
HMGCLP35914 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
HMGCLP35914 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.47□□□□□ -1.69
HMGCLP35914 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HMGCLP35914 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.46□□□□□ -1.69
HMGCLP35914 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.46□□□□□ -1.7
HMGCLP35914 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HMGCLP35914 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.46□□□□□ -1.7
HMGCLP35914 RNA5SP307-201ENST00000362863 116 ntBASIC4.46□□□□□ -1.7
HMGCLP35914 MIR195-201ENST00000385194 87 ntBASIC4.46□□□□□ -1.7
HMGCLP35914 AMZ2P2-201ENST00000406819 1057 ntBASIC4.46□□□□□ -1.7
HMGCLP35914 SEPT7P8-201ENST00000413308 775 ntBASIC4.46□□□□□ -1.7
HMGCLP35914 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.46□□□□□ -1.7
HMGCLP35914 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.46□□□□□ -1.7
HMGCLP35914 CR848007.2-201ENST00000424918 787 ntBASIC4.46□□□□□ -1.7
HMGCLP35914 MTATP6P11-201ENST00000428071 670 ntBASIC4.46□□□□□ -1.7
HMGCLP35914 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.46□□□□□ -1.7
HMGCLP35914 RPL12P28-201ENST00000430852 489 ntBASIC4.46□□□□□ -1.7
HMGCLP35914 CDY14P-201ENST00000431260 1014 ntBASIC4.46□□□□□ -1.7
HMGCLP35914 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HMGCLP35914 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.46□□□□□ -1.7
HMGCLP35914 CDY12P-201ENST00000440679 1015 ntBASIC4.46□□□□□ -1.7
HMGCLP35914 CDY13P-201ENST00000445813 1015 ntBASIC4.46□□□□□ -1.7
HMGCLP35914 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.46□□□□□ -1.7
HMGCLP35914 MORF4L1P4-201ENST00000450245 976 ntBASIC4.46□□□□□ -1.7
HMGCLP35914 CDY23P-201ENST00000451661 1014 ntBASIC4.46□□□□□ -1.7
HMGCLP35914 VN1R32P-201ENST00000452234 905 ntBASIC4.46□□□□□ -1.7
HMGCLP35914 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.46□□□□□ -1.7
HMGCLP35914 AC092905.1-201ENST00000467527 949 ntBASIC4.46□□□□□ -1.7
HMGCLP35914 DEFB109F-201ENST00000491870 277 ntBASIC4.46□□□□□ -1.7
HMGCLP35914 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.46□□□□□ -1.7
HMGCLP35914 SEC11B-201ENST00000518383 499 ntBASIC4.46□□□□□ -1.7
HMGCLP35914 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.46□□□□□ -1.7
HMGCLP35914 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.46□□□□□ -1.7
HMGCLP35914 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.46□□□□□ -1.7
HMGCLP35914 AP001804.2-201ENST00000533932 910 ntBASIC4.46□□□□□ -1.7
HMGCLP35914 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.46□□□□□ -1.7
HMGCLP35914 GLRXP2-201ENST00000555594 321 ntBASIC4.46□□□□□ -1.7
HMGCLP35914 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.46□□□□□ -1.7
HMGCLP35914 MIR4330-201ENST00000579077 105 ntBASIC4.46□□□□□ -1.7
HMGCLP35914 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HMGCLP35914 AP001160.4-201ENST00000596971 382 ntBASIC4.46□□□□□ -1.7
HMGCLP35914 RPL12P25-202ENST00000598100 674 ntBASIC4.46□□□□□ -1.7
HMGCLP35914 AC010201.1-201ENST00000605051 540 ntBASIC4.46□□□□□ -1.7
HMGCLP35914 AL162574.2-201ENST00000614618 657 ntBASIC4.46□□□□□ -1.7
HMGCLP35914 AC009237.17-201ENST00000618111 748 ntBASIC4.46□□□□□ -1.7
HMGCLP35914 AP000346.3-201ENST00000622821 210 ntBASIC4.46□□□□□ -1.7
HMGCLP35914 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.46□□□□□ -1.7
HMGCLP35914 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
HMGCLP35914 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HMGCLP35914 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HMGCLP35914 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HMGCLP35914 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.46□□□□□ -1.7
HMGCLP35914 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.46□□□□□ -1.7
HMGCLP35914 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
HMGCLP35914 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
HMGCLP35914 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.46□□□□□ -1.7
HMGCLP35914 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HMGCLP35914 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HMGCLP35914 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms