Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.62□□□□□ -1.67
HOXA9P31269 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
HOXA9P31269 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
HOXA9P31269 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
HOXA9P31269 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
HOXA9P31269 AC104297.1-201ENST00000393779 870 ntBASIC4.62□□□□□ -1.67
HOXA9P31269 EIF4A1P3-201ENST00000411521 244 ntBASIC4.62□□□□□ -1.67
HOXA9P31269 SEPT7P8-201ENST00000413308 775 ntBASIC4.62□□□□□ -1.67
HOXA9P31269 BTF3P10-201ENST00000433415 495 ntBASIC4.62□□□□□ -1.67
HOXA9P31269 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.62□□□□□ -1.67
HOXA9P31269 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.62□□□□□ -1.67
HOXA9P31269 RPL23AP52-201ENST00000439311 478 ntBASIC4.62□□□□□ -1.67
HOXA9P31269 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HOXA9P31269 EEF1A1P1-201ENST00000447052 739 ntBASIC4.62□□□□□ -1.67
HOXA9P31269 AL359073.1-201ENST00000448036 403 ntBASIC4.62□□□□□ -1.67
HOXA9P31269 RPS27AP17-201ENST00000463344 455 ntBASIC4.62□□□□□ -1.67
HOXA9P31269 BLNK-209ENST00000495266 440 ntTSL 5 BASIC4.62□□□□□ -1.67
HOXA9P31269 AL592156.1-201ENST00000508758 304 ntBASIC4.62□□□□□ -1.67
HOXA9P31269 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.62□□□□□ -1.67
HOXA9P31269 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HOXA9P31269 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.62□□□□□ -1.67
HOXA9P31269 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.62□□□□□ -1.67
HOXA9P31269 OR8R1P-201ENST00000543943 764 ntBASIC4.62□□□□□ -1.67
HOXA9P31269 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC4.62□□□□□ -1.67
HOXA9P31269 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.62□□□□□ -1.67
HOXA9P31269 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.62□□□□□ -1.67
HOXA9P31269 AC106785.1-201ENST00000565935 262 ntBASIC4.62□□□□□ -1.67
HOXA9P31269 AC034229.5-201ENST00000624258 185 ntBASIC4.62□□□□□ -1.67
HOXA9P31269 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.62□□□□□ -1.67
HOXA9P31269 AL672167.1-205ENST00000641112 3080 ntBASIC4.62□□□□□ -1.67
HOXA9P31269 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.62□□□□□ -1.67
HOXA9P31269 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.62□□□□□ -1.67
HOXA9P31269 Z95327.2-201ENST00000414579 1873 ntBASIC4.62□□□□□ -1.67
HOXA9P31269 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
HOXA9P31269 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HOXA9P31269 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HOXA9P31269 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HOXA9P31269 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HOXA9P31269 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.62□□□□□ -1.67
HOXA9P31269 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
HOXA9P31269 AC093535.2-201ENST00000624769 2326 ntBASIC4.61□□□□□ -1.67
HOXA9P31269 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HOXA9P31269 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
HOXA9P31269 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HOXA9P31269 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HOXA9P31269 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.61□□□□□ -1.67
HOXA9P31269 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HOXA9P31269 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.61□□□□□ -1.67
HOXA9P31269 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HOXA9P31269 AL161909.1-201ENST00000397390 712 ntBASIC4.61□□□□□ -1.67
HOXA9P31269 AL592291.1-201ENST00000403830 352 ntBASIC4.61□□□□□ -1.67
HOXA9P31269 SNRPFP1-201ENST00000414761 252 ntBASIC4.61□□□□□ -1.67
HOXA9P31269 AL121578.1-201ENST00000428051 892 ntBASIC4.61□□□□□ -1.67
HOXA9P31269 AL512326.1-201ENST00000443050 721 ntBASIC4.61□□□□□ -1.67
HOXA9P31269 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.61□□□□□ -1.67
HOXA9P31269 CDC27P1-201ENST00000445384 715 ntBASIC4.61□□□□□ -1.67
HOXA9P31269 AC022431.1-201ENST00000450941 438 ntBASIC4.61□□□□□ -1.67
HOXA9P31269 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC4.61□□□□□ -1.67
HOXA9P31269 RPS27AP13-201ENST00000498403 237 ntBASIC4.61□□□□□ -1.67
HOXA9P31269 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.61□□□□□ -1.67
HOXA9P31269 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.61□□□□□ -1.67
HOXA9P31269 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.61□□□□□ -1.67
HOXA9P31269 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.61□□□□□ -1.67
HOXA9P31269 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.61□□□□□ -1.67
HOXA9P31269 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.61□□□□□ -1.67
HOXA9P31269 MTND2P17-201ENST00000550281 688 ntBASIC4.61□□□□□ -1.67
HOXA9P31269 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.61□□□□□ -1.67
HOXA9P31269 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.61□□□□□ -1.67
HOXA9P31269 AC091178.1-203ENST00000584586 279 ntBASIC4.61□□□□□ -1.67
HOXA9P31269 AC006116.5-201ENST00000591936 559 ntBASIC4.61□□□□□ -1.67
HOXA9P31269 AC090948.2-201ENST00000607363 564 ntBASIC4.61□□□□□ -1.67
HOXA9P31269 AL135786.2-201ENST00000608422 615 ntBASIC4.61□□□□□ -1.67
HOXA9P31269 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
HOXA9P31269 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
HOXA9P31269 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HOXA9P31269 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.61□□□□□ -1.67
HOXA9P31269 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.61□□□□□ -1.67
HOXA9P31269 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
HOXA9P31269 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.61□□□□□ -1.67
HOXA9P31269 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
HOXA9P31269 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
HOXA9P31269 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HOXA9P31269 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HOXA9P31269 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HOXA9P31269 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HOXA9P31269 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.6□□□□□ -1.67
HOXA9P31269 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.6□□□□□ -1.67
HOXA9P31269 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.6□□□□□ -1.67
HOXA9P31269 OR52B1P-201ENST00000316506 909 ntBASIC4.6□□□□□ -1.67
HOXA9P31269 RN7SKP280-201ENST00000364196 304 ntBASIC4.6□□□□□ -1.67
HOXA9P31269 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
HOXA9P31269 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.6□□□□□ -1.67
HOXA9P31269 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.6□□□□□ -1.67
HOXA9P31269 CASKP1-201ENST00000412870 582 ntBASIC4.6□□□□□ -1.67
HOXA9P31269 MTND4LP21-201ENST00000415303 295 ntBASIC4.6□□□□□ -1.67
HOXA9P31269 AC062016.2-201ENST00000420950 676 ntBASIC4.6□□□□□ -1.67
HOXA9P31269 ARAFP1-201ENST00000422172 605 ntBASIC4.6□□□□□ -1.67
HOXA9P31269 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.6□□□□□ -1.67
HOXA9P31269 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.6□□□□□ -1.67
HOXA9P31269 AL357520.1-201ENST00000441557 453 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms