Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC3.93□□□□□ -1.78
USF1P22415 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC3.93□□□□□ -1.78
USF1P22415 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
USF1P22415 AC092079.1-201ENST00000558620 1985 ntBASIC3.93□□□□□ -1.78
USF1P22415 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
USF1P22415 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC3.93□□□□□ -1.78
USF1P22415 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
USF1P22415 AC010329.2-201ENST00000595195 2737 ntBASIC3.93□□□□□ -1.78
USF1P22415 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC3.93□□□□□ -1.78
USF1P22415 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.93□□□□□ -1.78
USF1P22415 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
USF1P22415 RNU6-891P-201ENST00000384280 111 ntBASIC3.93□□□□□ -1.78
USF1P22415 SNORA11-201ENST00000408789 128 ntBASIC3.93□□□□□ -1.78
USF1P22415 EIF4A1P3-201ENST00000411521 244 ntBASIC3.93□□□□□ -1.78
USF1P22415 CYCSP10-201ENST00000417973 294 ntBASIC3.93□□□□□ -1.78
USF1P22415 RPL17P36-201ENST00000420302 549 ntBASIC3.93□□□□□ -1.78
USF1P22415 GTF2IP2-201ENST00000424290 697 ntBASIC3.93□□□□□ -1.78
USF1P22415 RPEP3-201ENST00000425462 676 ntBASIC3.93□□□□□ -1.78
USF1P22415 AL732292.1-201ENST00000426692 226 ntBASIC3.93□□□□□ -1.78
USF1P22415 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
USF1P22415 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC3.93□□□□□ -1.78
USF1P22415 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
USF1P22415 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC3.93□□□□□ -1.78
USF1P22415 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC3.93□□□□□ -1.78
USF1P22415 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC3.93□□□□□ -1.78
USF1P22415 ZFRP1-201ENST00000457579 2970 ntBASIC3.93□□□□□ -1.78
USF1P22415 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC3.93□□□□□ -1.78
USF1P22415 APOOP2-201ENST00000461561 539 ntBASIC3.93□□□□□ -1.78
USF1P22415 APOA2-207ENST00000470459 416 ntTSL 5 BASIC3.93□□□□□ -1.78
USF1P22415 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC3.93□□□□□ -1.78
USF1P22415 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.93□□□□□ -1.78
USF1P22415 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC3.93□□□□□ -1.78
USF1P22415 AC026688.1-201ENST00000520639 1168 ntBASIC3.93□□□□□ -1.78
USF1P22415 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC3.93□□□□□ -1.78
USF1P22415 CARD16-203ENST00000525374 503 ntTSL 3 BASIC3.93□□□□□ -1.78
USF1P22415 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC3.93□□□□□ -1.78
USF1P22415 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.93□□□□□ -1.78
USF1P22415 AC084783.1-201ENST00000565846 910 ntBASIC3.93□□□□□ -1.78
USF1P22415 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
USF1P22415 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
USF1P22415 AC020910.2-201ENST00000603635 610 ntBASIC3.93□□□□□ -1.78
USF1P22415 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC3.93□□□□□ -1.78
USF1P22415 AC100847.1-201ENST00000611316 481 ntBASIC3.93□□□□□ -1.78
USF1P22415 AC005962.2-201ENST00000611427 652 ntBASIC3.93□□□□□ -1.78
USF1P22415 AL133243.1-201ENST00000614487 366 ntBASIC3.93□□□□□ -1.78
USF1P22415 AC004232.3-201ENST00000622977 525 ntBASIC3.93□□□□□ -1.78
USF1P22415 BMS1P21-201ENST00000634565 365 ntBASIC3.93□□□□□ -1.78
USF1P22415 AC006453.5-201ENST00000636451 619 ntBASIC3.93□□□□□ -1.78
USF1P22415 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
USF1P22415 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.93□□□□□ -1.78
USF1P22415 AP001273.1-201ENST00000624493 3152 ntBASIC3.93□□□□□ -1.78
USF1P22415 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
USF1P22415 AL136164.3-201ENST00000624429 3978 ntBASIC3.93□□□□□ -1.78
USF1P22415 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC3.93□□□□□ -1.78
USF1P22415 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
USF1P22415 MFSD8-242ENST00000641690 4199 ntBASIC3.92□□□□□ -1.78
USF1P22415 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC3.92□□□□□ -1.78
USF1P22415 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC3.92□□□□□ -1.78
USF1P22415 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
USF1P22415 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC3.92□□□□□ -1.78
USF1P22415 SPATA2P1-201ENST00000431223 2055 ntBASIC3.92□□□□□ -1.78
USF1P22415 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
USF1P22415 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
USF1P22415 AC093719.1-202ENST00000392735 373 ntBASIC3.92□□□□□ -1.78
USF1P22415 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
USF1P22415 U3.35-201ENST00000408405 208 ntBASIC3.92□□□□□ -1.78
USF1P22415 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
USF1P22415 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC3.92□□□□□ -1.78
USF1P22415 AC099336.2-201ENST00000422457 254 ntBASIC3.92□□□□□ -1.78
USF1P22415 AC234779.1-201ENST00000425910 285 ntBASIC3.92□□□□□ -1.78
USF1P22415 MTCO1P45-201ENST00000431457 267 ntBASIC3.92□□□□□ -1.78
USF1P22415 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC3.92□□□□□ -1.78
USF1P22415 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
USF1P22415 MTCYBP29-201ENST00000436327 1006 ntBASIC3.92□□□□□ -1.78
USF1P22415 CACYBPP1-201ENST00000438592 684 ntBASIC3.92□□□□□ -1.78
USF1P22415 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC3.92□□□□□ -1.78
USF1P22415 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC3.92□□□□□ -1.78
USF1P22415 RHEBP2-201ENST00000450289 600 ntBASIC3.92□□□□□ -1.78
USF1P22415 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC3.92□□□□□ -1.78
USF1P22415 CLIC4P1-201ENST00000453177 535 ntBASIC3.92□□□□□ -1.78
USF1P22415 AC099560.2-201ENST00000457554 255 ntBASIC3.92□□□□□ -1.78
USF1P22415 SEPT14P1-201ENST00000458703 648 ntBASIC3.92□□□□□ -1.78
USF1P22415 AL161747.1-201ENST00000480068 358 ntBASIC3.92□□□□□ -1.78
USF1P22415 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
USF1P22415 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
USF1P22415 IGHVIII-2-1-201ENST00000518843 291 ntBASIC3.92□□□□□ -1.78
USF1P22415 AC138701.1-201ENST00000524329 714 ntBASIC3.92□□□□□ -1.78
USF1P22415 AP001781.1-201ENST00000530977 207 ntBASIC3.92□□□□□ -1.78
USF1P22415 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC3.92□□□□□ -1.78
USF1P22415 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC3.92□□□□□ -1.78
USF1P22415 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
USF1P22415 AC023575.1-201ENST00000580510 358 ntBASIC3.92□□□□□ -1.78
USF1P22415 AC090312.1-201ENST00000580637 348 ntBASIC3.92□□□□□ -1.78
USF1P22415 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.92□□□□□ -1.78
USF1P22415 AC073091.2-201ENST00000603205 907 ntBASIC3.92□□□□□ -1.78
USF1P22415 MIR6716-201ENST00000613413 80 ntBASIC3.92□□□□□ -1.78
USF1P22415 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC3.92□□□□□ -1.78
USF1P22415 AC015908.5-201ENST00000623289 343 ntBASIC3.92□□□□□ -1.78
USF1P22415 AC067931.1-201ENST00000624190 671 ntBASIC3.92□□□□□ -1.78
USF1P22415 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms