Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.67□□□□□ -1.5
ATF4P18848 LINC02024-202ENST00000493545 483 ntTSL 3 BASIC5.67□□□□□ -1.5
ATF4P18848 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC5.67□□□□□ -1.5
ATF4P18848 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5.67□□□□□ -1.5
ATF4P18848 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.67□□□□□ -1.5
ATF4P18848 PTGES3P3-201ENST00000511479 482 ntBASIC5.67□□□□□ -1.5
ATF4P18848 AC010342.1-201ENST00000514047 877 ntBASIC5.67□□□□□ -1.5
ATF4P18848 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC5.67□□□□□ -1.5
ATF4P18848 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC5.67□□□□□ -1.5
ATF4P18848 SNORD116-26-201ENST00000516006 96 ntBASIC5.67□□□□□ -1.5
ATF4P18848 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC5.67□□□□□ -1.5
ATF4P18848 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.67□□□□□ -1.5
ATF4P18848 AP000880.1-202ENST00000526487 588 ntTSL 3 BASIC5.67□□□□□ -1.5
ATF4P18848 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC5.67□□□□□ -1.5
ATF4P18848 PTP4A1P6-201ENST00000531034 478 ntBASIC5.67□□□□□ -1.5
ATF4P18848 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
ATF4P18848 OR7E87P-201ENST00000532397 929 ntBASIC5.67□□□□□ -1.5
ATF4P18848 AC107918.3-201ENST00000533272 382 ntBASIC5.67□□□□□ -1.5
ATF4P18848 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.67□□□□□ -1.5
ATF4P18848 RPS3AP4-201ENST00000555161 764 ntBASIC5.67□□□□□ -1.5
ATF4P18848 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.67□□□□□ -1.5
ATF4P18848 AC243312.1-201ENST00000570582 275 ntBASIC5.67□□□□□ -1.5
ATF4P18848 AC099489.2-201ENST00000574976 260 ntBASIC5.67□□□□□ -1.5
ATF4P18848 AC005410.2-201ENST00000580270 463 ntTSL 3 BASIC5.67□□□□□ -1.5
ATF4P18848 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC5.67□□□□□ -1.5
ATF4P18848 ELOCP28-201ENST00000590044 317 ntBASIC5.67□□□□□ -1.5
ATF4P18848 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
ATF4P18848 AL355812.1-201ENST00000603215 216 ntBASIC5.67□□□□□ -1.5
ATF4P18848 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC5.67□□□□□ -1.5
ATF4P18848 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
ATF4P18848 AL356321.1-201ENST00000621360 228 ntBASIC5.67□□□□□ -1.5
ATF4P18848 AC129908.1-201ENST00000624553 648 ntBASIC5.67□□□□□ -1.5
ATF4P18848 SNX18P10-201ENST00000625014 519 ntBASIC5.67□□□□□ -1.5
ATF4P18848 DLST-216ENST00000626051 252 ntTSL 5 BASIC5.67□□□□□ -1.5
ATF4P18848 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC5.67□□□□□ -1.5
ATF4P18848 AC016582.3-206ENST00000636547 207 ntBASIC5.67□□□□□ -1.5
ATF4P18848 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
ATF4P18848 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC5.67□□□□□ -1.5
ATF4P18848 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
ATF4P18848 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
ATF4P18848 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
ATF4P18848 GNPAT-201ENST00000366647 2643 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
ATF4P18848 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
ATF4P18848 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.67□□□□□ -1.5
ATF4P18848 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC5.67□□□□□ -1.5
ATF4P18848 ZNF652P1-201ENST00000442420 1309 ntBASIC5.67□□□□□ -1.5
ATF4P18848 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
ATF4P18848 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
ATF4P18848 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
ATF4P18848 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
ATF4P18848 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.66□□□□□ -1.5
ATF4P18848 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
ATF4P18848 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
ATF4P18848 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
ATF4P18848 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.66□□□□□ -1.5
ATF4P18848 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
ATF4P18848 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
ATF4P18848 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
ATF4P18848 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
ATF4P18848 TPTE2P2-201ENST00000403471 1466 ntBASIC5.66□□□□□ -1.5
ATF4P18848 AC010266.2-201ENST00000564741 3255 ntBASIC5.66□□□□□ -1.5
ATF4P18848 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.66□□□□□ -1.5
ATF4P18848 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
ATF4P18848 STAG3L4-201ENST00000352103 530 ntBASIC5.66□□□□□ -1.5
ATF4P18848 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.66□□□□□ -1.5
ATF4P18848 Y_RNA.234-201ENST00000364409 97 ntBASIC5.66□□□□□ -1.5
ATF4P18848 Y_RNA.372-201ENST00000365599 102 ntBASIC5.66□□□□□ -1.5
ATF4P18848 C1orf54-203ENST00000369102 1251 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
ATF4P18848 RNA5SP18-201ENST00000390935 121 ntBASIC5.66□□□□□ -1.5
ATF4P18848 SNORA68.2-201ENST00000391263 128 ntBASIC5.66□□□□□ -1.5
ATF4P18848 MTND4LP20-201ENST00000402379 270 ntBASIC5.66□□□□□ -1.5
ATF4P18848 AL049693.1-201ENST00000402760 611 ntBASIC5.66□□□□□ -1.5
ATF4P18848 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
ATF4P18848 MIR1250-201ENST00000408098 113 ntBASIC5.66□□□□□ -1.5
ATF4P18848 RNU4-55P-201ENST00000410731 137 ntBASIC5.66□□□□□ -1.5
ATF4P18848 RNU6-195P-201ENST00000411352 109 ntBASIC5.66□□□□□ -1.5
ATF4P18848 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC5.66□□□□□ -1.5
ATF4P18848 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.66□□□□□ -1.5
ATF4P18848 RPL36AP36-201ENST00000418616 301 ntBASIC5.66□□□□□ -1.5
ATF4P18848 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.66□□□□□ -1.5
ATF4P18848 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC5.66□□□□□ -1.5
ATF4P18848 RPSAP1-201ENST00000421328 880 ntBASIC5.66□□□□□ -1.5
ATF4P18848 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC5.66□□□□□ -1.5
ATF4P18848 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
ATF4P18848 AL139158.1-201ENST00000424719 340 ntBASIC5.66□□□□□ -1.5
ATF4P18848 OR51AB1P-201ENST00000429046 620 ntBASIC5.66□□□□□ -1.5
ATF4P18848 MTND1P2-201ENST00000430604 821 ntBASIC5.66□□□□□ -1.5
ATF4P18848 GAPDHP19-201ENST00000431768 1005 ntBASIC5.66□□□□□ -1.5
ATF4P18848 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC5.66□□□□□ -1.5
ATF4P18848 MTCYBP45-201ENST00000435243 565 ntBASIC5.66□□□□□ -1.5
ATF4P18848 UBE2V1P13-201ENST00000436983 439 ntBASIC5.66□□□□□ -1.5
ATF4P18848 AL451074.3-201ENST00000437709 472 ntBASIC5.66□□□□□ -1.5
ATF4P18848 AC108734.1-201ENST00000439549 399 ntBASIC5.66□□□□□ -1.5
ATF4P18848 CYP2C56P-201ENST00000440076 291 ntBASIC5.66□□□□□ -1.5
ATF4P18848 SS18L2P1-201ENST00000445923 213 ntBASIC5.66□□□□□ -1.5
ATF4P18848 Z99127.3-201ENST00000448158 395 ntBASIC5.66□□□□□ -1.5
ATF4P18848 RPL7P14-201ENST00000449851 741 ntBASIC5.66□□□□□ -1.5
ATF4P18848 AC010733.1-201ENST00000451515 401 ntBASIC5.66□□□□□ -1.5
ATF4P18848 HMGB3P21-201ENST00000452483 547 ntBASIC5.66□□□□□ -1.5
ATF4P18848 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms