Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC6.13□□□□□ -1.43
SNRPA1P09661 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC6.13□□□□□ -1.43
SNRPA1P09661 AC073387.2-201ENST00000604797 784 ntBASIC6.13□□□□□ -1.43
SNRPA1P09661 AC083809.1-201ENST00000615051 472 ntBASIC6.13□□□□□ -1.43
SNRPA1P09661 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC6.13□□□□□ -1.43
SNRPA1P09661 RMST_5.1-201ENST00000618704 126 ntBASIC6.13□□□□□ -1.43
SNRPA1P09661 AL731566.2-201ENST00000618971 317 ntBASIC6.13□□□□□ -1.43
SNRPA1P09661 AC068137.4-201ENST00000638485 296 ntBASIC6.13□□□□□ -1.43
SNRPA1P09661 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
SNRPA1P09661 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
SNRPA1P09661 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SNRPA1P09661 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
SNRPA1P09661 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SNRPA1P09661 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
SNRPA1P09661 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
SNRPA1P09661 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SNRPA1P09661 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.13□□□□□ -1.43
SNRPA1P09661 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
SNRPA1P09661 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SNRPA1P09661 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SNRPA1P09661 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SNRPA1P09661 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SNRPA1P09661 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC6.12□□□□□ -1.43
SNRPA1P09661 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SNRPA1P09661 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SNRPA1P09661 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SNRPA1P09661 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SNRPA1P09661 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC6.12□□□□□ -1.43
SNRPA1P09661 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SNRPA1P09661 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
SNRPA1P09661 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.12□□□□□ -1.43
SNRPA1P09661 MIR129-1-201ENST00000384972 72 ntBASIC6.12□□□□□ -1.43
SNRPA1P09661 RNU1-82P-201ENST00000390851 165 ntBASIC6.12□□□□□ -1.43
SNRPA1P09661 RN7SKP97-201ENST00000410966 333 ntBASIC6.12□□□□□ -1.43
SNRPA1P09661 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC6.12□□□□□ -1.43
SNRPA1P09661 AC013429.2-201ENST00000418798 781 ntBASIC6.12□□□□□ -1.43
SNRPA1P09661 KRR1P1-201ENST00000419430 803 ntBASIC6.12□□□□□ -1.43
SNRPA1P09661 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC6.12□□□□□ -1.43
SNRPA1P09661 DEFB130D-201ENST00000426866 237 ntBASIC6.12□□□□□ -1.43
SNRPA1P09661 CCNB1IP1P2-201ENST00000432876 818 ntBASIC6.12□□□□□ -1.43
SNRPA1P09661 AL451139.1-201ENST00000434718 346 ntBASIC6.12□□□□□ -1.43
SNRPA1P09661 RPL6P5-201ENST00000445678 828 ntBASIC6.12□□□□□ -1.43
SNRPA1P09661 MTND6P5-201ENST00000448266 512 ntBASIC6.12□□□□□ -1.43
SNRPA1P09661 OFD1P7Y-201ENST00000454643 1155 ntBASIC6.12□□□□□ -1.43
SNRPA1P09661 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SNRPA1P09661 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SNRPA1P09661 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
SNRPA1P09661 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC6.12□□□□□ -1.43
SNRPA1P09661 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC6.12□□□□□ -1.43
SNRPA1P09661 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
SNRPA1P09661 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SNRPA1P09661 AC133963.2-201ENST00000513686 578 ntBASIC6.12□□□□□ -1.43
SNRPA1P09661 ASB8-204ENST00000536071 568 ntTSL 4 BASIC6.12□□□□□ -1.43
SNRPA1P09661 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC6.12□□□□□ -1.43
SNRPA1P09661 AC105129.1-201ENST00000560250 297 ntBASIC6.12□□□□□ -1.43
SNRPA1P09661 AC009097.3-201ENST00000563557 1018 ntBASIC6.12□□□□□ -1.43
SNRPA1P09661 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SNRPA1P09661 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC6.12□□□□□ -1.43
SNRPA1P09661 AC009643.2-201ENST00000603543 1448 ntBASIC6.12□□□□□ -1.43
SNRPA1P09661 AP004372.1-201ENST00000604842 844 ntBASIC6.12□□□□□ -1.43
SNRPA1P09661 AC092111.2-201ENST00000611627 1414 ntBASIC6.12□□□□□ -1.43
SNRPA1P09661 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC6.12□□□□□ -1.43
SNRPA1P09661 AL035461.2-201ENST00000619201 524 ntBASIC6.12□□□□□ -1.43
SNRPA1P09661 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC6.12□□□□□ -1.43
SNRPA1P09661 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC6.12□□□□□ -1.43
SNRPA1P09661 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
SNRPA1P09661 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
SNRPA1P09661 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
SNRPA1P09661 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
SNRPA1P09661 AP005432.1-201ENST00000580891 3485 ntBASIC6.12□□□□□ -1.43
SNRPA1P09661 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC6.11□□□□□ -1.43
SNRPA1P09661 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SNRPA1P09661 MIR513B-201ENST00000385136 84 ntBASIC6.11□□□□□ -1.43
SNRPA1P09661 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
SNRPA1P09661 AL603865.2-201ENST00000401679 213 ntBASIC6.11□□□□□ -1.43
SNRPA1P09661 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC6.11□□□□□ -1.43
SNRPA1P09661 AL591848.1-201ENST00000413092 322 ntBASIC6.11□□□□□ -1.43
SNRPA1P09661 AC079809.1-201ENST00000415468 276 ntBASIC6.11□□□□□ -1.43
SNRPA1P09661 AL449283.1-202ENST00000418249 604 ntBASIC6.11□□□□□ -1.43
SNRPA1P09661 AC140479.3-201ENST00000418944 1126 ntBASIC6.11□□□□□ -1.43
SNRPA1P09661 AC010099.3-201ENST00000423896 409 ntBASIC6.11□□□□□ -1.43
SNRPA1P09661 DNAJA1P1-201ENST00000425106 1187 ntBASIC6.11□□□□□ -1.43
SNRPA1P09661 CR769776.1-201ENST00000441254 787 ntBASIC6.11□□□□□ -1.43
SNRPA1P09661 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC6.11□□□□□ -1.43
SNRPA1P09661 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SNRPA1P09661 ARL2BPP10-201ENST00000446487 531 ntBASIC6.11□□□□□ -1.43
SNRPA1P09661 TPT1P12-201ENST00000448968 492 ntBASIC6.11□□□□□ -1.43
SNRPA1P09661 RN7SL385P-201ENST00000468873 276 ntBASIC6.11□□□□□ -1.43
SNRPA1P09661 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC6.11□□□□□ -1.43
SNRPA1P09661 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.11□□□□□ -1.43
SNRPA1P09661 RPL23AP53-201ENST00000521854 457 ntBASIC6.11□□□□□ -1.43
SNRPA1P09661 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC6.11□□□□□ -1.43
SNRPA1P09661 AC008126.1-201ENST00000549019 480 ntBASIC6.11□□□□□ -1.43
SNRPA1P09661 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC6.11□□□□□ -1.43
SNRPA1P09661 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC6.11□□□□□ -1.43
SNRPA1P09661 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC6.11□□□□□ -1.43
SNRPA1P09661 MTND3P13-201ENST00000574391 343 ntBASIC6.11□□□□□ -1.43
SNRPA1P09661 AP005119.2-201ENST00000579735 1105 ntBASIC6.11□□□□□ -1.43
SNRPA1P09661 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC6.11□□□□□ -1.43
SNRPA1P09661 Z82195.1-201ENST00000604558 398 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms