Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AC005868.1-201ENST00000536421 331 ntBASIC5.27□□□□□ -1.57
HOXC6P09630 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HOXC6P09630 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC5.27□□□□□ -1.57
HOXC6P09630 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC5.27□□□□□ -1.57
HOXC6P09630 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.27□□□□□ -1.57
HOXC6P09630 AP001033.2-201ENST00000609701 1003 ntBASIC5.27□□□□□ -1.57
HOXC6P09630 AL023881.1-201ENST00000621088 301 ntBASIC5.27□□□□□ -1.57
HOXC6P09630 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
HOXC6P09630 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
HOXC6P09630 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HOXC6P09630 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HOXC6P09630 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.26□□□□□ -1.57
HOXC6P09630 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
HOXC6P09630 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HOXC6P09630 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HOXC6P09630 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
HOXC6P09630 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HOXC6P09630 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
HOXC6P09630 SNORA37-201ENST00000384504 129 ntBASIC5.26□□□□□ -1.57
HOXC6P09630 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.26□□□□□ -1.57
HOXC6P09630 ARAFP1-201ENST00000422172 605 ntBASIC5.26□□□□□ -1.57
HOXC6P09630 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.26□□□□□ -1.57
HOXC6P09630 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.26□□□□□ -1.57
HOXC6P09630 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC5.26□□□□□ -1.57
HOXC6P09630 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.26□□□□□ -1.57
HOXC6P09630 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.26□□□□□ -1.57
HOXC6P09630 RPL21P126-201ENST00000470049 478 ntBASIC5.26□□□□□ -1.57
HOXC6P09630 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.26□□□□□ -1.57
HOXC6P09630 PCNAP1-201ENST00000505363 709 ntBASIC5.26□□□□□ -1.57
HOXC6P09630 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.26□□□□□ -1.57
HOXC6P09630 OSBPL9P3-201ENST00000534523 595 ntBASIC5.26□□□□□ -1.57
HOXC6P09630 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.26□□□□□ -1.57
HOXC6P09630 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC5.26□□□□□ -1.57
HOXC6P09630 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC5.26□□□□□ -1.57
HOXC6P09630 VN1R85P-201ENST00000601587 426 ntBASIC5.26□□□□□ -1.57
HOXC6P09630 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.26□□□□□ -1.57
HOXC6P09630 AL445435.1-201ENST00000604232 665 ntBASIC5.26□□□□□ -1.57
HOXC6P09630 AC018926.1-201ENST00000616335 435 ntBASIC5.26□□□□□ -1.57
HOXC6P09630 CU459211.1-201ENST00000635667 749 ntBASIC5.26□□□□□ -1.57
HOXC6P09630 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HOXC6P09630 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HOXC6P09630 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
HOXC6P09630 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
HOXC6P09630 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
HOXC6P09630 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HOXC6P09630 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.26□□□□□ -1.57
HOXC6P09630 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
HOXC6P09630 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
HOXC6P09630 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.25□□□□□ -1.57
HOXC6P09630 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.25□□□□□ -1.57
HOXC6P09630 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.25□□□□□ -1.57
HOXC6P09630 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HOXC6P09630 AC100778.3-201ENST00000580060 1750 ntBASIC5.25□□□□□ -1.57
HOXC6P09630 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.25□□□□□ -1.57
HOXC6P09630 RPL21P108-201ENST00000413857 481 ntBASIC5.25□□□□□ -1.57
HOXC6P09630 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.25□□□□□ -1.57
HOXC6P09630 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.25□□□□□ -1.57
HOXC6P09630 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.25□□□□□ -1.57
HOXC6P09630 RNF19BPX-201ENST00000426224 625 ntBASIC5.25□□□□□ -1.57
HOXC6P09630 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.25□□□□□ -1.57
HOXC6P09630 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.25□□□□□ -1.57
HOXC6P09630 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC5.25□□□□□ -1.57
HOXC6P09630 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.25□□□□□ -1.57
HOXC6P09630 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC5.25□□□□□ -1.57
HOXC6P09630 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HOXC6P09630 CDC27P1-201ENST00000445384 715 ntBASIC5.25□□□□□ -1.57
HOXC6P09630 BTF3P6-201ENST00000448054 499 ntBASIC5.25□□□□□ -1.57
HOXC6P09630 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.25□□□□□ -1.57
HOXC6P09630 NUTF2P3-201ENST00000448540 384 ntBASIC5.25□□□□□ -1.57
HOXC6P09630 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC5.25□□□□□ -1.57
HOXC6P09630 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC5.25□□□□□ -1.57
HOXC6P09630 RPL7AP52-201ENST00000458096 790 ntBASIC5.25□□□□□ -1.57
HOXC6P09630 AC090543.1-201ENST00000492168 485 ntBASIC5.25□□□□□ -1.57
HOXC6P09630 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.25□□□□□ -1.57
HOXC6P09630 SLC25A15P5-201ENST00000508033 253 ntBASIC5.25□□□□□ -1.57
HOXC6P09630 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC5.25□□□□□ -1.57
HOXC6P09630 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC5.25□□□□□ -1.57
HOXC6P09630 MTCO1P35-201ENST00000515270 228 ntBASIC5.25□□□□□ -1.57
HOXC6P09630 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HOXC6P09630 RNU6-491P-201ENST00000516099 110 ntBASIC5.25□□□□□ -1.57
HOXC6P09630 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC5.25□□□□□ -1.57
HOXC6P09630 C1DP5-201ENST00000525775 383 ntBASIC5.25□□□□□ -1.57
HOXC6P09630 OR7E13P-201ENST00000526052 910 ntBASIC5.25□□□□□ -1.57
HOXC6P09630 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC5.25□□□□□ -1.57
HOXC6P09630 CYCSP29-201ENST00000533731 318 ntBASIC5.25□□□□□ -1.57
HOXC6P09630 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.25□□□□□ -1.57
HOXC6P09630 AL049830.4-201ENST00000555149 351 ntBASIC5.25□□□□□ -1.57
HOXC6P09630 AC025884.1-201ENST00000556034 378 ntBASIC5.25□□□□□ -1.57
HOXC6P09630 AC027281.1-201ENST00000574178 758 ntBASIC5.25□□□□□ -1.57
HOXC6P09630 AC011477.5-201ENST00000586571 259 ntBASIC5.25□□□□□ -1.57
HOXC6P09630 AC087683.2-201ENST00000611384 326 ntBASIC5.25□□□□□ -1.57
HOXC6P09630 AC023043.4-201ENST00000612081 449 ntBASIC5.25□□□□□ -1.57
HOXC6P09630 AC068880.4-201ENST00000623082 495 ntBASIC5.25□□□□□ -1.57
HOXC6P09630 AL078595.3-201ENST00000623815 1166 ntBASIC5.25□□□□□ -1.57
HOXC6P09630 AP000843.1-201ENST00000624880 701 ntBASIC5.25□□□□□ -1.57
HOXC6P09630 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HOXC6P09630 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.25□□□□□ -1.57
HOXC6P09630 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
HOXC6P09630 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.25□□□□□ -1.57
HOXC6P09630 AC005005.4-201ENST00000623789 16698 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms