Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 IFNWP4-201ENST00000453148 294 ntBASIC4.8□□□□□ -1.64
TPM1P09493 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.8□□□□□ -1.64
TPM1P09493 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.8□□□□□ -1.64
TPM1P09493 IGLV2-28-201ENST00000520681 304 ntBASIC4.8□□□□□ -1.64
TPM1P09493 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.8□□□□□ -1.64
TPM1P09493 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.8□□□□□ -1.64
TPM1P09493 AC009117.1-201ENST00000563948 554 ntBASIC4.8□□□□□ -1.64
TPM1P09493 MIR4489-201ENST00000578869 62 ntBASIC4.8□□□□□ -1.64
TPM1P09493 SNX6P1-201ENST00000601728 1224 ntBASIC4.8□□□□□ -1.64
TPM1P09493 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC4.8□□□□□ -1.64
TPM1P09493 AC005034.4-201ENST00000603612 899 ntBASIC4.8□□□□□ -1.64
TPM1P09493 AC098935.2-201ENST00000604222 466 ntBASIC4.8□□□□□ -1.64
TPM1P09493 AC010200.2-201ENST00000605098 235 ntBASIC4.8□□□□□ -1.64
TPM1P09493 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.8□□□□□ -1.64
TPM1P09493 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.8□□□□□ -1.64
TPM1P09493 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
TPM1P09493 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TPM1P09493 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.8□□□□□ -1.64
TPM1P09493 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
TPM1P09493 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TPM1P09493 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
TPM1P09493 LINC02471-203ENST00000641941 4752 ntBASIC4.79□□□□□ -1.64
TPM1P09493 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
TPM1P09493 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.79□□□□□ -1.64
TPM1P09493 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.79□□□□□ -1.64
TPM1P09493 AL590240.1-201ENST00000334118 313 ntBASIC4.79□□□□□ -1.64
TPM1P09493 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
TPM1P09493 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TPM1P09493 RNA5SP306-201ENST00000411087 107 ntBASIC4.79□□□□□ -1.64
TPM1P09493 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.79□□□□□ -1.64
TPM1P09493 AC019050.1-201ENST00000418508 492 ntBASIC4.79□□□□□ -1.64
TPM1P09493 AC079355.1-201ENST00000421770 223 ntBASIC4.79□□□□□ -1.64
TPM1P09493 SEC63P1-201ENST00000425785 1258 ntBASIC4.79□□□□□ -1.64
TPM1P09493 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.79□□□□□ -1.64
TPM1P09493 RPL7P28-201ENST00000437739 740 ntBASIC4.79□□□□□ -1.64
TPM1P09493 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.79□□□□□ -1.64
TPM1P09493 RPL23AP43-201ENST00000446445 471 ntBASIC4.79□□□□□ -1.64
TPM1P09493 AC069277.2-201ENST00000454211 432 ntBASIC4.79□□□□□ -1.64
TPM1P09493 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.79□□□□□ -1.64
TPM1P09493 RN7SL585P-201ENST00000470538 280 ntBASIC4.79□□□□□ -1.64
TPM1P09493 AC096741.1-201ENST00000472250 846 ntBASIC4.79□□□□□ -1.64
TPM1P09493 RPL7P16-201ENST00000479738 738 ntBASIC4.79□□□□□ -1.64
TPM1P09493 AC018797.3-201ENST00000513388 1241 ntBASIC4.79□□□□□ -1.64
TPM1P09493 NPM1P35-201ENST00000533043 868 ntBASIC4.79□□□□□ -1.64
TPM1P09493 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.79□□□□□ -1.64
TPM1P09493 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
TPM1P09493 HMGN2P6-201ENST00000551091 273 ntBASIC4.79□□□□□ -1.64
TPM1P09493 AL352979.3-201ENST00000553515 247 ntBASIC4.79□□□□□ -1.64
TPM1P09493 AL360157.1-201ENST00000565962 87 ntBASIC4.79□□□□□ -1.64
TPM1P09493 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC4.79□□□□□ -1.64
TPM1P09493 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.79□□□□□ -1.64
TPM1P09493 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.79□□□□□ -1.64
TPM1P09493 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.79□□□□□ -1.64
TPM1P09493 HMGB1P50-201ENST00000605814 607 ntBASIC4.79□□□□□ -1.64
TPM1P09493 AL592494.3-201ENST00000609485 464 ntBASIC4.79□□□□□ -1.64
TPM1P09493 AC004948.1-201ENST00000609858 672 ntBASIC4.79□□□□□ -1.64
TPM1P09493 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.79□□□□□ -1.64
TPM1P09493 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.79□□□□□ -1.64
TPM1P09493 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
TPM1P09493 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TPM1P09493 MAPK10-253ENST00000641010 4072 ntBASIC4.79□□□□□ -1.64
TPM1P09493 AL356317.1-201ENST00000396110 1436 ntBASIC4.79□□□□□ -1.64
TPM1P09493 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TPM1P09493 AC093311.1-201ENST00000506586 2021 ntBASIC4.79□□□□□ -1.64
TPM1P09493 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.78□□□□□ -1.64
TPM1P09493 AC017007.4-201ENST00000503353 1352 ntBASIC4.78□□□□□ -1.64
TPM1P09493 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.78□□□□□ -1.64
TPM1P09493 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
TPM1P09493 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.78□□□□□ -1.64
TPM1P09493 RN7SKP149-201ENST00000363008 344 ntBASIC4.78□□□□□ -1.64
TPM1P09493 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TPM1P09493 AL161631.1-201ENST00000417933 486 ntBASIC4.78□□□□□ -1.64
TPM1P09493 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.78□□□□□ -1.64
TPM1P09493 AC004074.1-201ENST00000421810 1063 ntBASIC4.78□□□□□ -1.64
TPM1P09493 RPL12P34-201ENST00000424532 479 ntBASIC4.78□□□□□ -1.64
TPM1P09493 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.78□□□□□ -1.64
TPM1P09493 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.78□□□□□ -1.64
TPM1P09493 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.78□□□□□ -1.64
TPM1P09493 RN7SL205P-201ENST00000490174 284 ntBASIC4.78□□□□□ -1.64
TPM1P09493 PRELID3BP7-201ENST00000503606 469 ntBASIC4.78□□□□□ -1.64
TPM1P09493 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TPM1P09493 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.78□□□□□ -1.64
TPM1P09493 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.78□□□□□ -1.64
TPM1P09493 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.78□□□□□ -1.64
TPM1P09493 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.78□□□□□ -1.64
TPM1P09493 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.78□□□□□ -1.64
TPM1P09493 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TPM1P09493 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.78□□□□□ -1.64
TPM1P09493 AC020914.4-201ENST00000597690 277 ntBASIC4.78□□□□□ -1.64
TPM1P09493 AC017076.1-201ENST00000607613 578 ntBASIC4.78□□□□□ -1.64
TPM1P09493 AC015922.4-201ENST00000612568 690 ntBASIC4.78□□□□□ -1.64
TPM1P09493 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.78□□□□□ -1.64
TPM1P09493 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
TPM1P09493 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
TPM1P09493 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TPM1P09493 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TPM1P09493 OR11H5P-202ENST00000641612 1325 ntBASIC4.77□□□□□ -1.65
TPM1P09493 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TPM1P09493 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.77□□□□□ -1.65
TPM1P09493 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms