| MT1A | P04731 | DNAL1-206 | ENST00000554871 | 632 nt | TSL 1 (best) BASIC | 1.3 | □□□□□ -2.2 | | |
| MT1A | P04731 | FOPNL-207 | ENST00000575073 | 530 nt | TSL 2 BASIC | 1.3 | □□□□□ -2.2 | | |
| MT1A | P04731 | AC023575.1-201 | ENST00000580510 | 358 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| MT1A | P04731 | TTN-AS1-222 | ENST00000587576 | 399 nt | TSL 3 BASIC | 1.3 | □□□□□ -2.2 | | |
| MT1A | P04731 | AC008638.3-201 | ENST00000603341 | 463 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| MT1A | P04731 | AL161729.3-201 | ENST00000603533 | 673 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| MT1A | P04731 | AL139395.1-201 | ENST00000603662 | 160 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| MT1A | P04731 | AL354984.3-201 | ENST00000604803 | 325 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| MT1A | P04731 | MIR378J-201 | ENST00000611988 | 109 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| MT1A | P04731 | FAM49B-229 | ENST00000615041 | 750 nt | TSL 5 BASIC | 1.3 | □□□□□ -2.2 | | |
| MT1A | P04731 | AC114781.5-201 | ENST00000615297 | 108 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| MT1A | P04731 | AC006338.2-201 | ENST00000616864 | 791 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| MT1A | P04731 | AC023509.5-201 | ENST00000617434 | 807 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| MT1A | P04731 | MSANTD4-206 | ENST00000617528 | 508 nt | TSL 5 BASIC | 1.3 | □□□□□ -2.2 | | |
| MT1A | P04731 | UBE2NL-201 | ENST00000618570 | 1185 nt | APPRIS P1 BASIC | 1.3 | □□□□□ -2.2 | | |
| MT1A | P04731 | AL513314.2-204 | ENST00000619187 | 459 nt | TSL 5 BASIC | 1.3 | □□□□□ -2.2 | | |
| MT1A | P04731 | AC005911.1-201 | ENST00000619883 | 456 nt | TSL 5 BASIC | 1.3 | □□□□□ -2.2 | | |
| MT1A | P04731 | AL390964.1-201 | ENST00000622486 | 845 nt | TSL 3 BASIC | 1.3 | □□□□□ -2.2 | | |
| MT1A | P04731 | AP000843.1-201 | ENST00000624880 | 701 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| MT1A | P04731 | LINC01002-227 | ENST00000633363 | 541 nt | TSL 1 (best) BASIC | 1.3 | □□□□□ -2.2 | | |
| MT1A | P04731 | AC107068.2-201 | ENST00000634611 | 447 nt | TSL 2 BASIC | 1.3 | □□□□□ -2.2 | | |
| MT1A | P04731 | AC008013.2-202 | ENST00000637965 | 364 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| MT1A | P04731 | RIMS2-201 | ENST00000262231 | 3854 nt | TSL 1 (best) BASIC | 1.3 | □□□□□ -2.2 | | |
| MT1A | P04731 | SLC44A5-202 | ENST00000370859 | 3896 nt | APPRIS ALT2 TSL 2 BASIC | 1.3 | □□□□□ -2.2 | | |
| MT1A | P04731 | SMC2-AS1-201 | ENST00000603487 | 7020 nt | TSL 2 BASIC | 1.3 | □□□□□ -2.2 | | |
| MT1A | P04731 | RAP1B-201 | ENST00000250559 | 13438 nt | APPRIS P1 TSL 1 (best) BASIC | 1.3 | □□□□□ -2.2 | | |
| MT1A | P04731 | SLC26A7-209 | ENST00000617078 | 5094 nt | TSL 5 BASIC | 1.3 | □□□□□ -2.2 | | |
| MT1A | P04731 | ZNF568-214 | ENST00000616085 | 3542 nt | TSL 5 BASIC | 1.3 | □□□□□ -2.2 | | |
| MT1A | P04731 | FAM49B-212 | ENST00000519110 | 1902 nt | APPRIS P1 TSL 5 BASIC | 1.3 | □□□□□ -2.2 | | |
| MT1A | P04731 | AL133243.3-201 | ENST00000617415 | 3004 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| MT1A | P04731 | PROS2P-201 | ENST00000474651 | 1951 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| MT1A | P04731 | SLCO1A2-201 | ENST00000307378 | 7682 nt | APPRIS P1 TSL 1 (best) BASIC | 1.3 | □□□□□ -2.2 | | |
| MT1A | P04731 | CHL1-216 | ENST00000620033 | 7311 nt | TSL 1 (best) BASIC | 1.3 | □□□□□ -2.2 | | |
| MT1A | P04731 | ADGRL2-211 | ENST00000370730 | 6173 nt | TSL 5 BASIC | 1.3 | □□□□□ -2.2 | | |
| MT1A | P04731 | CNTN5-209 | ENST00000528682 | 3800 nt | APPRIS P4 TSL 5 BASIC | 1.3 | □□□□□ -2.2 | | |
| MT1A | P04731 | ABI3BP-206 | ENST00000471714 | 6783 nt | APPRIS ALT2 TSL 5 BASIC | 1.3 | □□□□□ -2.2 | | |
| MT1A | P04731 | FAM133A-201 | ENST00000322139 | 3292 nt | APPRIS P1 TSL 4 BASIC | 1.3 | □□□□□ -2.2 | | |
| MT1A | P04731 | MALRD1-204 | ENST00000454679 | 6880 nt | APPRIS P1 TSL 1 (best) BASIC | 1.3 | □□□□□ -2.2 | | |
| MT1A | P04731 | ZBTB37-201 | ENST00000367701 | 19128 nt | APPRIS P1 TSL 1 (best) BASIC | 1.3 | □□□□□ -2.2 | | |
| MT1A | P04731 | GALNT3-202 | ENST00000409882 | 2107 nt | TSL 1 (best) BASIC | 1.3 | □□□□□ -2.2 | | |
| MT1A | P04731 | EIF3E-201 | ENST00000220849 | 1543 nt | APPRIS P1 TSL 1 (best) BASIC | 1.3 | □□□□□ -2.2 | | |
| MT1A | P04731 | ANKRD20A10P-201 | ENST00000457591 | 1515 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| MT1A | P04731 | CFAP221-215 | ENST00000598644 | 1532 nt | TSL 2 BASIC | 1.3 | □□□□□ -2.2 | | |
| MT1A | P04731 | SYNE2-202 | ENST00000344113 | 21777 nt | APPRIS ALT2 TSL 1 (best) BASIC | 1.3 | □□□□□ -2.2 | | |
| MT1A | P04731 | LPAR4-205 | ENST00000614823 | 2155 nt | APPRIS P1 TSL 4 BASIC | 1.3 | □□□□□ -2.2 | | |
| MT1A | P04731 | GABRA1-220 | ENST00000638159 | 4088 nt | TSL 5 BASIC | 1.3 | □□□□□ -2.2 | | |
| MT1A | P04731 | AC007491.1-202 | ENST00000637961 | 1576 nt | TSL 5 BASIC | 1.3 | □□□□□ -2.2 | | |
| MT1A | P04731 | UBE2W-207 | ENST00000602593 | 2201 nt | APPRIS P1 TSL 1 (best) BASIC | 1.3 | □□□□□ -2.2 | | |
| MT1A | P04731 | DDX4-204 | ENST00000505374 | 2884 nt | APPRIS P1 TSL 1 (best) BASIC | 1.29 | □□□□□ -2.2 | | |
| MT1A | P04731 | AL158163.1-201 | ENST00000603915 | 1649 nt | BASIC | 1.29 | □□□□□ -2.2 | | |
| MT1A | P04731 | RTTN-201 | ENST00000255674 | 6960 nt | TSL 5 BASIC | 1.29 | □□□□□ -2.2 | | |
| MT1A | P04731 | TET2-203 | ENST00000380013 | 9679 nt | APPRIS P2 TSL 5 BASIC | 1.29 | □□□□□ -2.2 | | |
| MT1A | P04731 | RANBP2-201 | ENST00000283195 | 11711 nt | APPRIS P1 TSL 1 (best) BASIC | 1.29 | □□□□□ -2.2 | | |
| MT1A | P04731 | SMAD5-212 | ENST00000545620 | 6937 nt | APPRIS P1 TSL 5 BASIC | 1.29 | □□□□□ -2.2 | | |
| MT1A | P04731 | ZNF705A-201 | ENST00000359286 | 3455 nt | APPRIS P1 TSL 2 BASIC | 1.29 | □□□□□ -2.2 | | |
| MT1A | P04731 | FAM19A2-215 | ENST00000551619 | 2718 nt | APPRIS P1 TSL 2 BASIC | 1.29 | □□□□□ -2.2 | | |
| MT1A | P04731 | DCX-202 | ENST00000358070 | 9405 nt | APPRIS ALT1 TSL 1 (best) BASIC | 1.29 | □□□□□ -2.2 | | |
| MT1A | P04731 | ADAM29-214 | ENST00000618444 | 2949 nt | APPRIS P1 TSL 4 BASIC | 1.29 | □□□□□ -2.2 | | |
| MT1A | P04731 | FAM3C2-201 | ENST00000312214 | 681 nt | BASIC | 1.29 | □□□□□ -2.2 | | |
| MT1A | P04731 | OR14C36-201 | ENST00000317861 | 939 nt | APPRIS P1 BASIC | 1.29 | □□□□□ -2.2 | | |
| MT1A | P04731 | AC126755.2-208 | ENST00000327792 | 462 nt | BASIC | 1.29 | □□□□□ -2.2 | | |
| MT1A | P04731 | AC138969.1-213 | ENST00000331436 | 462 nt | BASIC | 1.29 | □□□□□ -2.2 | | |
| MT1A | P04731 | AC067945.1-201 | ENST00000342609 | 618 nt | BASIC | 1.29 | □□□□□ -2.2 | | |
| MT1A | P04731 | SNORA62-201 | ENST00000365493 | 153 nt | BASIC | 1.29 | □□□□□ -2.2 | | |
| MT1A | P04731 | PMS1-202 | ENST00000374826 | 948 nt | TSL 1 (best) BASIC | 1.29 | □□□□□ -2.2 | | |
| MT1A | P04731 | DPRX-201 | ENST00000376650 | 648 nt | APPRIS P1 TSL 3 BASIC | 1.29 | □□□□□ -2.2 | | |
| MT1A | P04731 | KRTAP19-8-201 | ENST00000382822 | 318 nt | APPRIS P1 BASIC | 1.29 | □□□□□ -2.2 | | |
| MT1A | P04731 | TRGV8-201 | ENST00000390343 | 468 nt | APPRIS P1 BASIC | 1.29 | □□□□□ -2.2 | | |
| MT1A | P04731 | AL161909.1-201 | ENST00000397390 | 712 nt | BASIC | 1.29 | □□□□□ -2.2 | | |
| MT1A | P04731 | ATP5F1P2-201 | ENST00000398143 | 760 nt | BASIC | 1.29 | □□□□□ -2.2 | | |
| MT1A | P04731 | OTUD6B-202 | ENST00000404789 | 1089 nt | TSL 1 (best) BASIC | 1.29 | □□□□□ -2.2 | | |
| MT1A | P04731 | RNA5SP36-201 | ENST00000410197 | 133 nt | BASIC | 1.29 | □□□□□ -2.2 | | |
| MT1A | P04731 | RN7SKP235-201 | ENST00000410662 | 305 nt | BASIC | 1.29 | □□□□□ -2.2 | | |
| MT1A | P04731 | RN7SKP182-201 | ENST00000410772 | 298 nt | BASIC | 1.29 | □□□□□ -2.2 | | |
| MT1A | P04731 | NRBF2P2-201 | ENST00000413087 | 861 nt | BASIC | 1.29 | □□□□□ -2.2 | | |
| MT1A | P04731 | JKAMPP1-201 | ENST00000413804 | 919 nt | BASIC | 1.29 | □□□□□ -2.2 | | |
| MT1A | P04731 | LINC01423-201 | ENST00000414189 | 608 nt | TSL 3 BASIC | 1.29 | □□□□□ -2.2 | | |
| MT1A | P04731 | RPL6P29-201 | ENST00000414863 | 865 nt | BASIC | 1.29 | □□□□□ -2.2 | | |
| MT1A | P04731 | RPS23P10-201 | ENST00000416185 | 486 nt | BASIC | 1.29 | □□□□□ -2.2 | | |
| MT1A | P04731 | AL161631.1-201 | ENST00000417933 | 486 nt | BASIC | 1.29 | □□□□□ -2.2 | | |
| MT1A | P04731 | AL133419.1-201 | ENST00000423153 | 640 nt | TSL 3 BASIC | 1.29 | □□□□□ -2.2 | | |
| MT1A | P04731 | RPS12P5-201 | ENST00000423449 | 371 nt | BASIC | 1.29 | □□□□□ -2.2 | | |
| MT1A | P04731 | C4BPAP2-201 | ENST00000428434 | 478 nt | BASIC | 1.29 | □□□□□ -2.2 | | |
| MT1A | P04731 | AL590999.1-204 | ENST00000430595 | 638 nt | TSL 3 BASIC | 1.29 | □□□□□ -2.2 | | |
| MT1A | P04731 | AC002378.1-201 | ENST00000432360 | 298 nt | TSL 3 BASIC | 1.29 | □□□□□ -2.2 | | |
| MT1A | P04731 | HLA-N-201 | ENST00000437516 | 135 nt | BASIC | 1.29 | □□□□□ -2.2 | | |
| MT1A | P04731 | AL096678.1-201 | ENST00000438877 | 472 nt | TSL 3 BASIC | 1.29 | □□□□□ -2.2 | | |
| MT1A | P04731 | RPSAP41-201 | ENST00000439695 | 860 nt | BASIC | 1.29 | □□□□□ -2.2 | | |
| MT1A | P04731 | AL162419.1-201 | ENST00000440674 | 873 nt | TSL 1 (best) BASIC | 1.29 | □□□□□ -2.2 | | |
| MT1A | P04731 | BMS1P22-202 | ENST00000440946 | 1160 nt | TSL 1 (best) BASIC | 1.29 | □□□□□ -2.2 | | |
| MT1A | P04731 | GSTA9P-202 | ENST00000448991 | 521 nt | TSL 3 BASIC | 1.29 | □□□□□ -2.2 | | |
| MT1A | P04731 | LINC02527-201 | ENST00000449069 | 762 nt | TSL 3 BASIC | 1.29 | □□□□□ -2.2 | | |
| MT1A | P04731 | RBBP6-204 | ENST00000452655 | 854 nt | TSL 1 (best) BASIC | 1.29 | □□□□□ -2.2 | | |
| MT1A | P04731 | LINC01768-201 | ENST00000453347 | 476 nt | TSL 3 BASIC | 1.29 | □□□□□ -2.2 | | |
| MT1A | P04731 | EIF4A2P2-201 | ENST00000455776 | 1070 nt | BASIC | 1.29 | □□□□□ -2.2 | | |
| MT1A | P04731 | RNA5SP246-201 | ENST00000458909 | 119 nt | BASIC | 1.29 | □□□□□ -2.2 | | |
| MT1A | P04731 | TFEC-208 | ENST00000484212 | 1245 nt | TSL 2 BASIC | 1.29 | □□□□□ -2.2 | | |
| MT1A | P04731 | RPS26P15-201 | ENST00000488067 | 348 nt | BASIC | 1.29 | □□□□□ -2.2 | | |
| MT1A | P04731 | AC091167.1-201 | ENST00000492017 | 396 nt | BASIC | 1.29 | □□□□□ -2.2 | | |
| MT1A | P04731 | ALDH7A1P3-201 | ENST00000492517 | 345 nt | BASIC | 1.29 | □□□□□ -2.2 | | |