Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC3.91□□□□□ -1.78
HLA-DPB1P04440 AC073264.2-201ENST00000448886 166 ntBASIC3.91□□□□□ -1.78
HLA-DPB1P04440 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC3.91□□□□□ -1.78
HLA-DPB1P04440 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC3.91□□□□□ -1.78
HLA-DPB1P04440 HMGN1P8-201ENST00000463578 288 ntBASIC3.91□□□□□ -1.78
HLA-DPB1P04440 CDV3-208ENST00000511392 554 ntTSL 5 BASIC3.91□□□□□ -1.78
HLA-DPB1P04440 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC3.91□□□□□ -1.78
HLA-DPB1P04440 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC3.91□□□□□ -1.78
HLA-DPB1P04440 AP006289.1-201ENST00000538089 277 ntBASIC3.91□□□□□ -1.78
HLA-DPB1P04440 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC3.91□□□□□ -1.78
HLA-DPB1P04440 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC3.91□□□□□ -1.78
HLA-DPB1P04440 AC018552.1-201ENST00000562099 811 ntBASIC3.91□□□□□ -1.78
HLA-DPB1P04440 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC3.91□□□□□ -1.78
HLA-DPB1P04440 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC3.91□□□□□ -1.78
HLA-DPB1P04440 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC3.91□□□□□ -1.78
HLA-DPB1P04440 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.91□□□□□ -1.78
HLA-DPB1P04440 AC005034.4-201ENST00000603612 899 ntBASIC3.91□□□□□ -1.78
HLA-DPB1P04440 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC3.91□□□□□ -1.78
HLA-DPB1P04440 AC116651.1-201ENST00000609724 556 ntBASIC3.91□□□□□ -1.78
HLA-DPB1P04440 AC004241.3-201ENST00000611728 517 ntBASIC3.91□□□□□ -1.78
HLA-DPB1P04440 AC015722.2-201ENST00000622210 551 ntBASIC3.91□□□□□ -1.78
HLA-DPB1P04440 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC3.91□□□□□ -1.78
HLA-DPB1P04440 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HLA-DPB1P04440 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HLA-DPB1P04440 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
HLA-DPB1P04440 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.91□□□□□ -1.78
HLA-DPB1P04440 AC125257.1-201ENST00000560400 2930 ntBASIC3.91□□□□□ -1.78
HLA-DPB1P04440 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
HLA-DPB1P04440 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
HLA-DPB1P04440 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.78
HLA-DPB1P04440 AC073429.2-201ENST00000569694 1444 ntBASIC3.9□□□□□ -1.78
HLA-DPB1P04440 AL607077.1-201ENST00000401718 499 ntBASIC3.9□□□□□ -1.79
HLA-DPB1P04440 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC3.9□□□□□ -1.79
HLA-DPB1P04440 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.9□□□□□ -1.79
HLA-DPB1P04440 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.9□□□□□ -1.79
HLA-DPB1P04440 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HLA-DPB1P04440 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.9□□□□□ -1.79
HLA-DPB1P04440 UBE2V2P3-201ENST00000433562 437 ntBASIC3.9□□□□□ -1.79
HLA-DPB1P04440 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC3.9□□□□□ -1.79
HLA-DPB1P04440 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC3.9□□□□□ -1.79
HLA-DPB1P04440 RPL23AP93-201ENST00000440847 484 ntBASIC3.9□□□□□ -1.79
HLA-DPB1P04440 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC3.9□□□□□ -1.79
HLA-DPB1P04440 RPL23AP2-201ENST00000471227 466 ntBASIC3.9□□□□□ -1.79
HLA-DPB1P04440 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC3.9□□□□□ -1.79
HLA-DPB1P04440 RPL23AP72-201ENST00000492447 435 ntBASIC3.9□□□□□ -1.79
HLA-DPB1P04440 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC3.9□□□□□ -1.79
HLA-DPB1P04440 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC3.9□□□□□ -1.79
HLA-DPB1P04440 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC3.9□□□□□ -1.79
HLA-DPB1P04440 IGKV1-32-201ENST00000519290 311 ntBASIC3.9□□□□□ -1.79
HLA-DPB1P04440 AC018442.3-201ENST00000523025 183 ntBASIC3.9□□□□□ -1.79
HLA-DPB1P04440 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC3.9□□□□□ -1.79
HLA-DPB1P04440 AP001781.1-201ENST00000530977 207 ntBASIC3.9□□□□□ -1.79
HLA-DPB1P04440 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
HLA-DPB1P04440 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC3.9□□□□□ -1.79
HLA-DPB1P04440 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.9□□□□□ -1.79
HLA-DPB1P04440 AL049874.4-201ENST00000557593 255 ntBASIC3.9□□□□□ -1.79
HLA-DPB1P04440 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HLA-DPB1P04440 AC027281.1-201ENST00000574178 758 ntBASIC3.9□□□□□ -1.79
HLA-DPB1P04440 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC3.9□□□□□ -1.79
HLA-DPB1P04440 AC002044.3-201ENST00000623314 541 ntBASIC3.9□□□□□ -1.79
HLA-DPB1P04440 AC008785.1-201ENST00000624475 456 ntBASIC3.9□□□□□ -1.79
HLA-DPB1P04440 AL356121.2-201ENST00000624715 780 ntBASIC3.9□□□□□ -1.79
HLA-DPB1P04440 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
HLA-DPB1P04440 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HLA-DPB1P04440 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC3.9□□□□□ -1.79
HLA-DPB1P04440 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HLA-DPB1P04440 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HLA-DPB1P04440 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
HLA-DPB1P04440 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
HLA-DPB1P04440 KARSP3-201ENST00000571212 1504 ntBASIC3.9□□□□□ -1.79
HLA-DPB1P04440 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.89□□□□□ -1.79
HLA-DPB1P04440 RNU4-23P-201ENST00000362839 140 ntBASIC3.89□□□□□ -1.79
HLA-DPB1P04440 RNU6-670P-201ENST00000364312 104 ntBASIC3.89□□□□□ -1.79
HLA-DPB1P04440 MIR585-201ENST00000384887 94 ntBASIC3.89□□□□□ -1.79
HLA-DPB1P04440 OR1F12-201ENST00000402365 945 ntBASIC3.89□□□□□ -1.79
HLA-DPB1P04440 RPS16P5-201ENST00000406501 404 ntBASIC3.89□□□□□ -1.79
HLA-DPB1P04440 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
HLA-DPB1P04440 AC092647.1-201ENST00000420654 287 ntBASIC3.89□□□□□ -1.79
HLA-DPB1P04440 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC3.89□□□□□ -1.79
HLA-DPB1P04440 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC3.89□□□□□ -1.79
HLA-DPB1P04440 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.89□□□□□ -1.79
HLA-DPB1P04440 ARL2BPP10-201ENST00000446487 531 ntBASIC3.89□□□□□ -1.79
HLA-DPB1P04440 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC3.89□□□□□ -1.79
HLA-DPB1P04440 SBDSP1-204ENST00000453858 737 ntBASIC3.89□□□□□ -1.79
HLA-DPB1P04440 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC3.89□□□□□ -1.79
HLA-DPB1P04440 AC107015.1-201ENST00000466902 747 ntBASIC3.89□□□□□ -1.79
HLA-DPB1P04440 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC3.89□□□□□ -1.79
HLA-DPB1P04440 RNU6-551P-201ENST00000516661 103 ntBASIC3.89□□□□□ -1.79
HLA-DPB1P04440 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
HLA-DPB1P04440 DYNLL1P4-201ENST00000549314 266 ntBASIC3.89□□□□□ -1.79
HLA-DPB1P04440 RN7SL690P-201ENST00000582087 240 ntBASIC3.89□□□□□ -1.79
HLA-DPB1P04440 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC3.89□□□□□ -1.79
HLA-DPB1P04440 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC3.89□□□□□ -1.79
HLA-DPB1P04440 AC008536.1-201ENST00000602872 669 ntBASIC3.89□□□□□ -1.79
HLA-DPB1P04440 AC012603.1-201ENST00000606424 528 ntBASIC3.89□□□□□ -1.79
HLA-DPB1P04440 MIR6780A-201ENST00000615089 68 ntBASIC3.89□□□□□ -1.79
HLA-DPB1P04440 RMST_9.1-201ENST00000619945 193 ntBASIC3.89□□□□□ -1.79
HLA-DPB1P04440 AC138907.10-201ENST00000623708 983 ntBASIC3.89□□□□□ -1.79
HLA-DPB1P04440 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
HLA-DPB1P04440 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms