Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
COL1A1P02452 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.07□□□□□ -1.6
COL1A1P02452 Z82217.1-201ENST00000625157 8149 ntBASIC5.07□□□□□ -1.6
COL1A1P02452 AL022322.2-201ENST00000624072 20397 ntBASIC5.07□□□□□ -1.6
COL1A1P02452 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
COL1A1P02452 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
COL1A1P02452 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
COL1A1P02452 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
COL1A1P02452 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
COL1A1P02452 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
COL1A1P02452 EIF1P3-201ENST00000423841 334 ntBASIC5.07□□□□□ -1.6
COL1A1P02452 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.07□□□□□ -1.6
COL1A1P02452 TBCAP1-201ENST00000436520 327 ntBASIC5.07□□□□□ -1.6
COL1A1P02452 BTG4P1-201ENST00000510421 183 ntBASIC5.07□□□□□ -1.6
COL1A1P02452 KRT19P6-201ENST00000510983 209 ntBASIC5.07□□□□□ -1.6
COL1A1P02452 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC5.07□□□□□ -1.6
COL1A1P02452 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
COL1A1P02452 OR51C1P-201ENST00000608504 942 ntBASIC5.07□□□□□ -1.6
COL1A1P02452 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
COL1A1P02452 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC5.07□□□□□ -1.6
COL1A1P02452 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
COL1A1P02452 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
COL1A1P02452 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
COL1A1P02452 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.06□□□□□ -1.6
COL1A1P02452 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
COL1A1P02452 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
COL1A1P02452 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
COL1A1P02452 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
COL1A1P02452 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
COL1A1P02452 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
COL1A1P02452 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
COL1A1P02452 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
COL1A1P02452 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC5.06□□□□□ -1.6
COL1A1P02452 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.06□□□□□ -1.6
COL1A1P02452 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC5.06□□□□□ -1.6
COL1A1P02452 OR11H4-201ENST00000315409 1082 ntBASIC5.06□□□□□ -1.6
COL1A1P02452 RN7SKP74-201ENST00000362849 309 ntBASIC5.06□□□□□ -1.6
COL1A1P02452 SNORD46.1-201ENST00000364139 104 ntBASIC5.06□□□□□ -1.6
COL1A1P02452 RNA5SP22-201ENST00000365393 109 ntBASIC5.06□□□□□ -1.6
COL1A1P02452 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
COL1A1P02452 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.06□□□□□ -1.6
COL1A1P02452 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.06□□□□□ -1.6
COL1A1P02452 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.06□□□□□ -1.6
COL1A1P02452 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
COL1A1P02452 AC027176.2-201ENST00000559166 746 ntBASIC5.06□□□□□ -1.6
COL1A1P02452 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC5.06□□□□□ -1.6
COL1A1P02452 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.06□□□□□ -1.6
COL1A1P02452 AC114878.2-201ENST00000604863 1251 ntBASIC5.06□□□□□ -1.6
COL1A1P02452 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC5.06□□□□□ -1.6
COL1A1P02452 AP003400.2-201ENST00000624036 666 ntBASIC5.06□□□□□ -1.6
COL1A1P02452 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
COL1A1P02452 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
COL1A1P02452 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
COL1A1P02452 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
COL1A1P02452 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
COL1A1P02452 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
COL1A1P02452 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.05□□□□□ -1.6
COL1A1P02452 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
COL1A1P02452 EED-206ENST00000527888 1422 ntTSL 2 BASIC5.05□□□□□ -1.6
COL1A1P02452 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
COL1A1P02452 SNORA71.3-201ENST00000362582 128 ntBASIC5.05□□□□□ -1.6
COL1A1P02452 MIR449B-201ENST00000384995 97 ntBASIC5.05□□□□□ -1.6
COL1A1P02452 UBTFL3-201ENST00000418934 1024 ntBASIC5.05□□□□□ -1.6
COL1A1P02452 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.05□□□□□ -1.6
COL1A1P02452 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.05□□□□□ -1.6
COL1A1P02452 AL445584.1-201ENST00000431451 330 ntBASIC5.05□□□□□ -1.6
COL1A1P02452 AL050321.1-201ENST00000432363 400 ntBASIC5.05□□□□□ -1.6
COL1A1P02452 RPL23AP83-201ENST00000434984 473 ntBASIC5.05□□□□□ -1.6
COL1A1P02452 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.05□□□□□ -1.6
COL1A1P02452 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.05□□□□□ -1.6
COL1A1P02452 EIF2S2P5-201ENST00000457635 968 ntBASIC5.05□□□□□ -1.6
COL1A1P02452 AC091564.1-201ENST00000464563 479 ntBASIC5.05□□□□□ -1.6
COL1A1P02452 UBTFL6-201ENST00000477929 1024 ntBASIC5.05□□□□□ -1.6
COL1A1P02452 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.05□□□□□ -1.6
COL1A1P02452 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC5.05□□□□□ -1.6
COL1A1P02452 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.05□□□□□ -1.6
COL1A1P02452 AC068993.1-201ENST00000546724 589 ntBASIC5.05□□□□□ -1.6
COL1A1P02452 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC5.05□□□□□ -1.6
COL1A1P02452 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
COL1A1P02452 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
COL1A1P02452 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
COL1A1P02452 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
COL1A1P02452 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
COL1A1P02452 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.04□□□□□ -1.6
COL1A1P02452 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
COL1A1P02452 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
COL1A1P02452 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
COL1A1P02452 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
COL1A1P02452 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.04□□□□□ -1.6
COL1A1P02452 MIR1179-201ENST00000408703 91 ntBASIC5.04□□□□□ -1.6
COL1A1P02452 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.04□□□□□ -1.6
COL1A1P02452 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC5.04□□□□□ -1.6
COL1A1P02452 RPL7P15-201ENST00000461190 712 ntBASIC5.04□□□□□ -1.6
COL1A1P02452 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.04□□□□□ -1.6
COL1A1P02452 BNIP3P41-201ENST00000503774 571 ntBASIC5.04□□□□□ -1.6
COL1A1P02452 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC5.04□□□□□ -1.6
COL1A1P02452 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.04□□□□□ -1.6
COL1A1P02452 RPL21P7-201ENST00000557463 483 ntBASIC5.04□□□□□ -1.6
COL1A1P02452 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC5.04□□□□□ -1.6
COL1A1P02452 MIR5684-201ENST00000585074 65 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms