Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AL021368.1-201ENST00000607490 540 ntBASIC4.77□□□□□ -1.65
PDGFBP01127 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.77□□□□□ -1.65
PDGFBP01127 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.77□□□□□ -1.65
PDGFBP01127 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC4.77□□□□□ -1.65
PDGFBP01127 MIR6075-201ENST00000620782 95 ntBASIC4.77□□□□□ -1.65
PDGFBP01127 U3.53-201ENST00000628922 216 ntBASIC4.77□□□□□ -1.65
PDGFBP01127 MIR492-201ENST00000638676 116 ntBASIC4.77□□□□□ -1.65
PDGFBP01127 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.77□□□□□ -1.65
PDGFBP01127 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC4.77□□□□□ -1.65
PDGFBP01127 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
PDGFBP01127 OR51C1P-202ENST00000641159 1444 ntBASIC4.77□□□□□ -1.65
PDGFBP01127 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PDGFBP01127 ZNF137P-201ENST00000456718 1920 ntBASIC4.77□□□□□ -1.65
PDGFBP01127 ASNSP1-201ENST00000518311 1939 ntBASIC4.77□□□□□ -1.65
PDGFBP01127 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PDGFBP01127 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
PDGFBP01127 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
PDGFBP01127 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
PDGFBP01127 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PDGFBP01127 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.77□□□□□ -1.65
PDGFBP01127 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PDGFBP01127 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PDGFBP01127 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.76□□□□□ -1.65
PDGFBP01127 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PDGFBP01127 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PDGFBP01127 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.76□□□□□ -1.65
PDGFBP01127 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PDGFBP01127 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PDGFBP01127 SNORD46.1-201ENST00000364139 104 ntBASIC4.76□□□□□ -1.65
PDGFBP01127 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.76□□□□□ -1.65
PDGFBP01127 SNORA71.2-201ENST00000364941 134 ntBASIC4.76□□□□□ -1.65
PDGFBP01127 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PDGFBP01127 PPIAP31-201ENST00000405422 495 ntBASIC4.76□□□□□ -1.65
PDGFBP01127 RN7SKP247-201ENST00000411094 308 ntBASIC4.76□□□□□ -1.65
PDGFBP01127 EIF4A1P3-201ENST00000411521 244 ntBASIC4.76□□□□□ -1.65
PDGFBP01127 TMBIM7P-201ENST00000418074 855 ntBASIC4.76□□□□□ -1.65
PDGFBP01127 OR6C64P-201ENST00000419708 825 ntBASIC4.76□□□□□ -1.65
PDGFBP01127 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.76□□□□□ -1.65
PDGFBP01127 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PDGFBP01127 HMGN2P27-201ENST00000427352 270 ntBASIC4.76□□□□□ -1.65
PDGFBP01127 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.76□□□□□ -1.65
PDGFBP01127 AC138761.5-201ENST00000433967 325 ntBASIC4.76□□□□□ -1.65
PDGFBP01127 RSL24D1P8-201ENST00000434442 492 ntBASIC4.76□□□□□ -1.65
PDGFBP01127 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
PDGFBP01127 RPS20P1-201ENST00000434853 354 ntBASIC4.76□□□□□ -1.65
PDGFBP01127 MRPS33P4-201ENST00000434892 317 ntBASIC4.76□□□□□ -1.65
PDGFBP01127 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC4.76□□□□□ -1.65
PDGFBP01127 MTND6P18-201ENST00000439477 513 ntBASIC4.76□□□□□ -1.65
PDGFBP01127 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.76□□□□□ -1.65
PDGFBP01127 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.76□□□□□ -1.65
PDGFBP01127 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.76□□□□□ -1.65
PDGFBP01127 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.76□□□□□ -1.65
PDGFBP01127 RN7SL810P-201ENST00000493031 276 ntBASIC4.76□□□□□ -1.65
PDGFBP01127 RPL36AP41-201ENST00000493820 306 ntBASIC4.76□□□□□ -1.65
PDGFBP01127 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PDGFBP01127 SCARNA13-201ENST00000516672 275 ntBASIC4.76□□□□□ -1.65
PDGFBP01127 RNU6-1308P-201ENST00000516817 103 ntBASIC4.76□□□□□ -1.65
PDGFBP01127 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
PDGFBP01127 AP000889.1-201ENST00000530968 660 ntBASIC4.76□□□□□ -1.65
PDGFBP01127 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.76□□□□□ -1.65
PDGFBP01127 AC068993.1-201ENST00000546724 589 ntBASIC4.76□□□□□ -1.65
PDGFBP01127 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.76□□□□□ -1.65
PDGFBP01127 AL121834.1-201ENST00000572284 509 ntBASIC4.76□□□□□ -1.65
PDGFBP01127 AC017100.2-201ENST00000584628 355 ntBASIC4.76□□□□□ -1.65
PDGFBP01127 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.76□□□□□ -1.65
PDGFBP01127 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC4.76□□□□□ -1.65
PDGFBP01127 PSMA6P4-201ENST00000603247 718 ntBASIC4.76□□□□□ -1.65
PDGFBP01127 AC010200.2-201ENST00000605098 235 ntBASIC4.76□□□□□ -1.65
PDGFBP01127 KATNBL1P1-201ENST00000605192 748 ntBASIC4.76□□□□□ -1.65
PDGFBP01127 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.76□□□□□ -1.65
PDGFBP01127 AC011472.4-201ENST00000615848 491 ntBASIC4.76□□□□□ -1.65
PDGFBP01127 AC074276.2-201ENST00000619891 348 ntBASIC4.76□□□□□ -1.65
PDGFBP01127 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
PDGFBP01127 LINC00216-201ENST00000623548 1126 ntBASIC4.76□□□□□ -1.65
PDGFBP01127 MIR3653-201ENST00000625572 110 ntBASIC4.76□□□□□ -1.65
PDGFBP01127 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
PDGFBP01127 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
PDGFBP01127 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.76□□□□□ -1.65
PDGFBP01127 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PDGFBP01127 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
PDGFBP01127 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PDGFBP01127 AC017002.4-201ENST00000604721 1525 ntBASIC4.76□□□□□ -1.65
PDGFBP01127 AC005261.4-201ENST00000600047 1385 ntBASIC4.76□□□□□ -1.65
PDGFBP01127 AC096656.1-201ENST00000623826 1364 ntBASIC4.76□□□□□ -1.65
PDGFBP01127 AC093591.2-201ENST00000565254 3843 ntBASIC4.76□□□□□ -1.65
PDGFBP01127 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.76□□□□□ -1.65
PDGFBP01127 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.76□□□□□ -1.65
PDGFBP01127 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PDGFBP01127 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC4.76□□□□□ -1.65
PDGFBP01127 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
PDGFBP01127 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PDGFBP01127 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PDGFBP01127 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.75□□□□□ -1.65
PDGFBP01127 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PDGFBP01127 SNORA73.1-201ENST00000363107 205 ntBASIC4.75□□□□□ -1.65
PDGFBP01127 AL590762.2-201ENST00000395798 571 ntBASIC4.75□□□□□ -1.65
PDGFBP01127 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC4.75□□□□□ -1.65
PDGFBP01127 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PDGFBP01127 TEX41-206ENST00000432608 661 ntTSL 3 BASIC4.75□□□□□ -1.65
PDGFBP01127 RPL23AP83-201ENST00000434984 473 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms