Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
RNF40O75150 AL049780.3-201ENST00000624612 1583 ntBASIC7.67□□□□□ -1.18
RNF40O75150 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC7.67□□□□□ -1.18
RNF40O75150 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
RNF40O75150 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC7.67□□□□□ -1.18
RNF40O75150 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
RNF40O75150 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
RNF40O75150 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
RNF40O75150 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
RNF40O75150 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC7.67□□□□□ -1.18
RNF40O75150 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC7.67□□□□□ -1.18
RNF40O75150 AC089998.1-201ENST00000548575 3141 ntBASIC7.67□□□□□ -1.18
RNF40O75150 RN7SKP174-201ENST00000363803 330 ntBASIC7.67□□□□□ -1.18
RNF40O75150 MIR575-201ENST00000385013 94 ntBASIC7.67□□□□□ -1.18
RNF40O75150 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
RNF40O75150 AC009362.1-201ENST00000427253 406 ntBASIC7.67□□□□□ -1.18
RNF40O75150 AC093151.1-201ENST00000427711 313 ntBASIC7.67□□□□□ -1.18
RNF40O75150 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC7.67□□□□□ -1.18
RNF40O75150 AC091390.2-201ENST00000432573 374 ntBASIC7.67□□□□□ -1.18
RNF40O75150 AC011742.2-201ENST00000443818 352 ntBASIC7.67□□□□□ -1.18
RNF40O75150 AL392103.1-201ENST00000447000 198 ntBASIC7.67□□□□□ -1.18
RNF40O75150 RPL12P25-201ENST00000455592 494 ntBASIC7.67□□□□□ -1.18
RNF40O75150 RPL21P42-201ENST00000488408 464 ntBASIC7.67□□□□□ -1.18
RNF40O75150 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC7.67□□□□□ -1.18
RNF40O75150 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC7.67□□□□□ -1.18
RNF40O75150 PSD2-AS1-201ENST00000515306 412 ntTSL 3 BASIC7.67□□□□□ -1.18
RNF40O75150 SNORA25.10-201ENST00000515926 124 ntBASIC7.67□□□□□ -1.18
RNF40O75150 RNU4-29P-201ENST00000515943 174 ntBASIC7.67□□□□□ -1.18
RNF40O75150 RNU6-1143P-201ENST00000516125 104 ntBASIC7.67□□□□□ -1.18
RNF40O75150 RNU4ATAC8P-201ENST00000516196 109 ntBASIC7.67□□□□□ -1.18
RNF40O75150 SUMO2P20-201ENST00000520803 283 ntBASIC7.67□□□□□ -1.18
RNF40O75150 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC7.67□□□□□ -1.18
RNF40O75150 AP000827.1-201ENST00000527814 258 ntBASIC7.67□□□□□ -1.18
RNF40O75150 AC027667.1-201ENST00000545814 304 ntBASIC7.67□□□□□ -1.18
RNF40O75150 OR4T1P-201ENST00000554933 911 ntBASIC7.67□□□□□ -1.18
RNF40O75150 AC061975.3-201ENST00000583209 244 ntBASIC7.67□□□□□ -1.18
RNF40O75150 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
RNF40O75150 AC010149.2-201ENST00000637608 315 ntBASIC7.67□□□□□ -1.18
RNF40O75150 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC7.67□□□□□ -1.18
RNF40O75150 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC7.67□□□□□ -1.18
RNF40O75150 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
RNF40O75150 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC7.67□□□□□ -1.18
RNF40O75150 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC7.67□□□□□ -1.18
RNF40O75150 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
RNF40O75150 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
RNF40O75150 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
RNF40O75150 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC7.67□□□□□ -1.18
RNF40O75150 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
RNF40O75150 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
RNF40O75150 AP003175.1-201ENST00000641383 6658 ntBASIC7.67□□□□□ -1.18
RNF40O75150 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC7.67□□□□□ -1.18
RNF40O75150 VPS35P1-201ENST00000563400 1518 ntBASIC7.67□□□□□ -1.18
RNF40O75150 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
RNF40O75150 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
RNF40O75150 RRM2-213ENST00000641198 3431 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
RNF40O75150 GPR19-201ENST00000332427 1743 ntAPPRIS P1 TSL 4 BASIC7.66□□□□□ -1.18
RNF40O75150 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
RNF40O75150 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
RNF40O75150 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC7.66□□□□□ -1.18
RNF40O75150 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
RNF40O75150 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
RNF40O75150 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC7.66□□□□□ -1.18
RNF40O75150 AC110716.2-201ENST00000563865 3945 ntBASIC7.66□□□□□ -1.18
RNF40O75150 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC7.66□□□□□ -1.18
RNF40O75150 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
RNF40O75150 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
RNF40O75150 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
RNF40O75150 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
RNF40O75150 AL596244.1-201ENST00000567068 3779 ntBASIC7.66□□□□□ -1.18
RNF40O75150 RBMX2P2-201ENST00000257020 946 ntBASIC7.66□□□□□ -1.18
RNF40O75150 RNU1-122P-201ENST00000365538 156 ntBASIC7.66□□□□□ -1.18
RNF40O75150 Y_RNA.552-201ENST00000384665 112 ntBASIC7.66□□□□□ -1.18
RNF40O75150 TRBV6-6-201ENST00000390371 388 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
RNF40O75150 CNN3P1-201ENST00000401596 935 ntBASIC7.66□□□□□ -1.18
RNF40O75150 SUMO2P13-201ENST00000403109 272 ntBASIC7.66□□□□□ -1.18
RNF40O75150 MIR1303-201ENST00000408625 86 ntBASIC7.66□□□□□ -1.18
RNF40O75150 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC7.66□□□□□ -1.18
RNF40O75150 AL355862.1-201ENST00000412705 353 ntBASIC7.66□□□□□ -1.18
RNF40O75150 AL662791.3-201ENST00000413771 776 ntBASIC7.66□□□□□ -1.18
RNF40O75150 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC7.66□□□□□ -1.18
RNF40O75150 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC7.66□□□□□ -1.18
RNF40O75150 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC7.66□□□□□ -1.18
RNF40O75150 ZDHHC20P1-204ENST00000435787 423 ntBASIC7.66□□□□□ -1.18
RNF40O75150 AL935212.3-201ENST00000450729 284 ntBASIC7.66□□□□□ -1.18
RNF40O75150 SBDSP1-204ENST00000453858 737 ntBASIC7.66□□□□□ -1.18
RNF40O75150 RBMY2EP-202ENST00000456360 940 ntBASIC7.66□□□□□ -1.18
RNF40O75150 MIR2053-201ENST00000459295 91 ntBASIC7.66□□□□□ -1.18
RNF40O75150 WBP1LP1-201ENST00000460451 896 ntBASIC7.66□□□□□ -1.18
RNF40O75150 AC090142.1-201ENST00000465776 462 ntBASIC7.66□□□□□ -1.18
RNF40O75150 GMFBP1-201ENST00000467831 427 ntBASIC7.66□□□□□ -1.18
RNF40O75150 RN7SL152P-201ENST00000484176 298 ntBASIC7.66□□□□□ -1.18
RNF40O75150 AC025271.1-201ENST00000485045 429 ntBASIC7.66□□□□□ -1.18
RNF40O75150 AC111193.1-201ENST00000504097 155 ntBASIC7.66□□□□□ -1.18
RNF40O75150 RNU6-1334P-201ENST00000516032 105 ntBASIC7.66□□□□□ -1.18
RNF40O75150 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC7.66□□□□□ -1.18
RNF40O75150 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC7.66□□□□□ -1.18
RNF40O75150 OR5M4P-201ENST00000529436 925 ntBASIC7.66□□□□□ -1.18
RNF40O75150 OR4R1P-201ENST00000529879 463 ntBASIC7.66□□□□□ -1.18
RNF40O75150 OR5F2P-201ENST00000532761 941 ntBASIC7.66□□□□□ -1.18
RNF40O75150 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC7.66□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms