Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SMIM28A0A1B0GU29 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SMIM28A0A1B0GU29 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
SMIM28A0A1B0GU29 RNA5SP28-201ENST00000363841 119 ntBASIC4.6□□□□□ -1.67
SMIM28A0A1B0GU29 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SMIM28A0A1B0GU29 MIR195-201ENST00000385194 87 ntBASIC4.6□□□□□ -1.67
SMIM28A0A1B0GU29 AL022722.2-201ENST00000402519 180 ntBASIC4.6□□□□□ -1.67
SMIM28A0A1B0GU29 ZNF736P10Y-201ENST00000403990 1110 ntBASIC4.6□□□□□ -1.67
SMIM28A0A1B0GU29 AL359643.1-201ENST00000404109 423 ntBASIC4.6□□□□□ -1.67
SMIM28A0A1B0GU29 RNA5SP317-201ENST00000410176 116 ntBASIC4.6□□□□□ -1.67
SMIM28A0A1B0GU29 RNA5SP311-201ENST00000411290 116 ntBASIC4.6□□□□□ -1.67
SMIM28A0A1B0GU29 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.6□□□□□ -1.67
SMIM28A0A1B0GU29 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.6□□□□□ -1.67
SMIM28A0A1B0GU29 OR4C10P-201ENST00000434991 931 ntBASIC4.6□□□□□ -1.67
SMIM28A0A1B0GU29 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SMIM28A0A1B0GU29 TPT1P1-201ENST00000458495 518 ntBASIC4.6□□□□□ -1.67
SMIM28A0A1B0GU29 RPS7P7-201ENST00000463499 571 ntBASIC4.6□□□□□ -1.67
SMIM28A0A1B0GU29 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SMIM28A0A1B0GU29 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC4.6□□□□□ -1.67
SMIM28A0A1B0GU29 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.6□□□□□ -1.67
SMIM28A0A1B0GU29 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC4.6□□□□□ -1.67
SMIM28A0A1B0GU29 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.6□□□□□ -1.67
SMIM28A0A1B0GU29 RNA5SP315-201ENST00000516340 116 ntBASIC4.6□□□□□ -1.67
SMIM28A0A1B0GU29 RNA5SP312-201ENST00000517068 116 ntBASIC4.6□□□□□ -1.67
SMIM28A0A1B0GU29 AC006064.5-201ENST00000541782 248 ntBASIC4.6□□□□□ -1.67
SMIM28A0A1B0GU29 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
SMIM28A0A1B0GU29 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.6□□□□□ -1.67
SMIM28A0A1B0GU29 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.6□□□□□ -1.67
SMIM28A0A1B0GU29 AC090506.2-201ENST00000624521 419 ntBASIC4.6□□□□□ -1.67
SMIM28A0A1B0GU29 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SMIM28A0A1B0GU29 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SMIM28A0A1B0GU29 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SMIM28A0A1B0GU29 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
SMIM28A0A1B0GU29 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.6□□□□□ -1.67
SMIM28A0A1B0GU29 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SMIM28A0A1B0GU29 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.6□□□□□ -1.67
SMIM28A0A1B0GU29 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.59□□□□□ -1.67
SMIM28A0A1B0GU29 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SMIM28A0A1B0GU29 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SMIM28A0A1B0GU29 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SMIM28A0A1B0GU29 RNU1-94P-201ENST00000362627 173 ntBASIC4.59□□□□□ -1.67
SMIM28A0A1B0GU29 RNA5SP22-201ENST00000365393 109 ntBASIC4.59□□□□□ -1.67
SMIM28A0A1B0GU29 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
SMIM28A0A1B0GU29 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.59□□□□□ -1.67
SMIM28A0A1B0GU29 MIR137-201ENST00000385223 102 ntBASIC4.59□□□□□ -1.67
SMIM28A0A1B0GU29 ATP5F1P2-201ENST00000398143 760 ntBASIC4.59□□□□□ -1.67
SMIM28A0A1B0GU29 RN7SKP182-201ENST00000410772 298 ntBASIC4.59□□□□□ -1.67
SMIM28A0A1B0GU29 AC098592.2-201ENST00000413158 265 ntBASIC4.59□□□□□ -1.67
SMIM28A0A1B0GU29 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.59□□□□□ -1.67
SMIM28A0A1B0GU29 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.59□□□□□ -1.67
SMIM28A0A1B0GU29 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.59□□□□□ -1.67
SMIM28A0A1B0GU29 MTCO1P51-201ENST00000427672 1060 ntBASIC4.59□□□□□ -1.67
SMIM28A0A1B0GU29 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
SMIM28A0A1B0GU29 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.59□□□□□ -1.67
SMIM28A0A1B0GU29 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SMIM28A0A1B0GU29 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SMIM28A0A1B0GU29 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.59□□□□□ -1.67
SMIM28A0A1B0GU29 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SMIM28A0A1B0GU29 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.59□□□□□ -1.67
SMIM28A0A1B0GU29 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.59□□□□□ -1.67
SMIM28A0A1B0GU29 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.59□□□□□ -1.67
SMIM28A0A1B0GU29 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.59□□□□□ -1.67
SMIM28A0A1B0GU29 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.59□□□□□ -1.67
SMIM28A0A1B0GU29 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.59□□□□□ -1.67
SMIM28A0A1B0GU29 AP000859.1-201ENST00000525536 307 ntBASIC4.59□□□□□ -1.67
SMIM28A0A1B0GU29 AL358913.1-201ENST00000554342 121 ntBASIC4.59□□□□□ -1.67
SMIM28A0A1B0GU29 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.59□□□□□ -1.67
SMIM28A0A1B0GU29 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SMIM28A0A1B0GU29 AC067959.1-201ENST00000604334 379 ntBASIC4.59□□□□□ -1.67
SMIM28A0A1B0GU29 GMCL1P2-201ENST00000605230 823 ntBASIC4.59□□□□□ -1.67
SMIM28A0A1B0GU29 AC067838.1-201ENST00000606064 577 ntBASIC4.59□□□□□ -1.67
SMIM28A0A1B0GU29 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.59□□□□□ -1.67
SMIM28A0A1B0GU29 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.59□□□□□ -1.67
SMIM28A0A1B0GU29 ZYXP1-201ENST00000617638 118 ntBASIC4.59□□□□□ -1.67
SMIM28A0A1B0GU29 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.59□□□□□ -1.67
SMIM28A0A1B0GU29 AC074140.1-201ENST00000621617 208 ntBASIC4.59□□□□□ -1.67
SMIM28A0A1B0GU29 RNA5SP196-201ENST00000625967 102 ntBASIC4.59□□□□□ -1.67
SMIM28A0A1B0GU29 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
SMIM28A0A1B0GU29 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SMIM28A0A1B0GU29 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
SMIM28A0A1B0GU29 AC104260.2-201ENST00000623551 3497 ntBASIC4.59□□□□□ -1.68
SMIM28A0A1B0GU29 AL592182.3-201ENST00000642132 3304 ntBASIC4.59□□□□□ -1.68
SMIM28A0A1B0GU29 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.59□□□□□ -1.68
SMIM28A0A1B0GU29 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.58□□□□□ -1.68
SMIM28A0A1B0GU29 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SMIM28A0A1B0GU29 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SMIM28A0A1B0GU29 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.58□□□□□ -1.68
SMIM28A0A1B0GU29 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SMIM28A0A1B0GU29 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
SMIM28A0A1B0GU29 MAPK10-304ENST00000641341 3984 ntBASIC4.58□□□□□ -1.68
SMIM28A0A1B0GU29 RNU6-249P-201ENST00000363016 102 ntBASIC4.58□□□□□ -1.68
SMIM28A0A1B0GU29 MIR1193-201ENST00000408109 78 ntBASIC4.58□□□□□ -1.68
SMIM28A0A1B0GU29 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.58□□□□□ -1.68
SMIM28A0A1B0GU29 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.58□□□□□ -1.68
SMIM28A0A1B0GU29 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.58□□□□□ -1.68
SMIM28A0A1B0GU29 RCC2P2-201ENST00000422174 918 ntBASIC4.58□□□□□ -1.68
SMIM28A0A1B0GU29 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.58□□□□□ -1.68
SMIM28A0A1B0GU29 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC4.58□□□□□ -1.68
SMIM28A0A1B0GU29 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.58□□□□□ -1.68
SMIM28A0A1B0GU29 RNA5SP103-201ENST00000459503 118 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms