Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC079168.2-201ENST00000453977 416 ntBASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 AC023050.1-201ENST00000498198 304 ntBASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 AC008638.1-201ENST00000506035 866 ntBASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 TCP11X3P-202ENST00000514289 1254 ntBASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 RNU2-30P-201ENST00000516209 141 ntBASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 AP001880.2-201ENST00000538233 448 ntBASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 AC044860.2-201ENST00000561005 179 ntBASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 BGLT3-201ENST00000564523 994 ntBASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 MIR4646-201ENST00000580775 63 ntBASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 SLC25A36P1-201ENST00000590111 465 ntBASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 AC010680.3-201ENST00000604215 520 ntBASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 AC073137.1-201ENST00000605636 634 ntBASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 AC010857.1-201ENST00000606398 594 ntBASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 AC133644.2-201ENST00000608142 540 ntBASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 AL353726.1-201ENST00000614041 1000 ntBASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 AC011472.4-201ENST00000615848 491 ntBASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 AL158196.1-201ENST00000616786 434 ntBASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 AC090510.2-201ENST00000617465 629 ntBASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 AC087385.3-201ENST00000620477 187 ntBASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RHBDD3Q9Y3P4 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RHBDD3Q9Y3P4 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RHBDD3Q9Y3P4 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RHBDD3Q9Y3P4 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RHBDD3Q9Y3P4 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RHBDD3Q9Y3P4 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
RHBDD3Q9Y3P4 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC4.04□□□□□ -1.76
RHBDD3Q9Y3P4 OR11H5P-202ENST00000641612 1325 ntBASIC4.04□□□□□ -1.76
RHBDD3Q9Y3P4 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RHBDD3Q9Y3P4 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.04□□□□□ -1.76
RHBDD3Q9Y3P4 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.04□□□□□ -1.76
RHBDD3Q9Y3P4 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
RHBDD3Q9Y3P4 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
RHBDD3Q9Y3P4 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
RHBDD3Q9Y3P4 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RHBDD3Q9Y3P4 VDAC1P9-201ENST00000412766 841 ntBASIC4.04□□□□□ -1.76
RHBDD3Q9Y3P4 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RHBDD3Q9Y3P4 AL353898.1-201ENST00000444055 238 ntBASIC4.04□□□□□ -1.76
RHBDD3Q9Y3P4 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.04□□□□□ -1.76
RHBDD3Q9Y3P4 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RHBDD3Q9Y3P4 AC063943.1-201ENST00000465434 453 ntBASIC4.04□□□□□ -1.76
RHBDD3Q9Y3P4 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.04□□□□□ -1.76
RHBDD3Q9Y3P4 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RHBDD3Q9Y3P4 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.04□□□□□ -1.76
RHBDD3Q9Y3P4 PPM1AP1-201ENST00000502740 1135 ntBASIC4.04□□□□□ -1.76
RHBDD3Q9Y3P4 SCARNA22-201ENST00000503991 125 ntBASIC4.04□□□□□ -1.76
RHBDD3Q9Y3P4 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.04□□□□□ -1.76
RHBDD3Q9Y3P4 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.04□□□□□ -1.76
RHBDD3Q9Y3P4 AC067904.2-201ENST00000517322 1283 ntBASIC4.04□□□□□ -1.76
RHBDD3Q9Y3P4 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.04□□□□□ -1.76
RHBDD3Q9Y3P4 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.04□□□□□ -1.76
RHBDD3Q9Y3P4 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.04□□□□□ -1.76
RHBDD3Q9Y3P4 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.04□□□□□ -1.76
RHBDD3Q9Y3P4 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.04□□□□□ -1.76
RHBDD3Q9Y3P4 EDDM3DP-201ENST00000554692 434 ntBASIC4.04□□□□□ -1.76
RHBDD3Q9Y3P4 AL161713.1-201ENST00000555538 145 ntBASIC4.04□□□□□ -1.76
RHBDD3Q9Y3P4 AC009117.1-201ENST00000563948 554 ntBASIC4.04□□□□□ -1.76
RHBDD3Q9Y3P4 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.04□□□□□ -1.76
RHBDD3Q9Y3P4 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.04□□□□□ -1.76
RHBDD3Q9Y3P4 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.04□□□□□ -1.76
RHBDD3Q9Y3P4 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.04□□□□□ -1.76
RHBDD3Q9Y3P4 AL355816.1-201ENST00000607951 118 ntBASIC4.04□□□□□ -1.76
RHBDD3Q9Y3P4 OR7A19P-201ENST00000608051 733 ntBASIC4.04□□□□□ -1.76
RHBDD3Q9Y3P4 MIR7155-201ENST00000615925 56 ntBASIC4.04□□□□□ -1.76
RHBDD3Q9Y3P4 MIR6719-201ENST00000622428 87 ntBASIC4.04□□□□□ -1.76
RHBDD3Q9Y3P4 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.04□□□□□ -1.76
RHBDD3Q9Y3P4 AC009452.1-201ENST00000640823 606 ntBASIC4.04□□□□□ -1.76
RHBDD3Q9Y3P4 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RHBDD3Q9Y3P4 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
RHBDD3Q9Y3P4 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RHBDD3Q9Y3P4 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RHBDD3Q9Y3P4 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
RHBDD3Q9Y3P4 NOL8P1-201ENST00000508336 3529 ntBASIC4.04□□□□□ -1.76
RHBDD3Q9Y3P4 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RHBDD3Q9Y3P4 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
RHBDD3Q9Y3P4 AC025125.1-201ENST00000624743 1922 ntBASIC4.03□□□□□ -1.76
RHBDD3Q9Y3P4 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.03□□□□□ -1.76
RHBDD3Q9Y3P4 MIR105-2-201ENST00000385083 81 ntBASIC4.03□□□□□ -1.76
RHBDD3Q9Y3P4 AL109941.1-201ENST00000401925 229 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms