Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC9.02□□□□□ -0.97
TRIM35Q9UPQ4 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC9.02□□□□□ -0.97
TRIM35Q9UPQ4 AC022616.6-201ENST00000520479 119 ntBASIC9.02□□□□□ -0.97
TRIM35Q9UPQ4 AP006587.5-201ENST00000532033 739 ntBASIC9.02□□□□□ -0.97
TRIM35Q9UPQ4 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC9.02□□□□□ -0.97
TRIM35Q9UPQ4 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC9.02□□□□□ -0.97
TRIM35Q9UPQ4 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC9.02□□□□□ -0.97
TRIM35Q9UPQ4 RPL23AP61-201ENST00000623642 466 ntBASIC9.02□□□□□ -0.97
TRIM35Q9UPQ4 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
TRIM35Q9UPQ4 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
TRIM35Q9UPQ4 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
TRIM35Q9UPQ4 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC9.02□□□□□ -0.97
TRIM35Q9UPQ4 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC9.02□□□□□ -0.97
TRIM35Q9UPQ4 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
TRIM35Q9UPQ4 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC9.02□□□□□ -0.97
TRIM35Q9UPQ4 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC9.02□□□□□ -0.97
TRIM35Q9UPQ4 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
TRIM35Q9UPQ4 ENO1P4-201ENST00000416471 1785 ntBASIC9.01□□□□□ -0.97
TRIM35Q9UPQ4 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC9.01□□□□□ -0.97
TRIM35Q9UPQ4 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC9.01□□□□□ -0.97
TRIM35Q9UPQ4 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
TRIM35Q9UPQ4 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
TRIM35Q9UPQ4 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
TRIM35Q9UPQ4 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
TRIM35Q9UPQ4 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
TRIM35Q9UPQ4 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC9.01□□□□□ -0.97
TRIM35Q9UPQ4 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
TRIM35Q9UPQ4 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
TRIM35Q9UPQ4 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
TRIM35Q9UPQ4 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC9.01□□□□□ -0.97
TRIM35Q9UPQ4 RNU6-492P-201ENST00000363035 104 ntBASIC9.01□□□□□ -0.97
TRIM35Q9UPQ4 RNU6-522P-201ENST00000364497 107 ntBASIC9.01□□□□□ -0.97
TRIM35Q9UPQ4 RNU6-450P-201ENST00000364654 107 ntBASIC9.01□□□□□ -0.97
TRIM35Q9UPQ4 RHOT1P2-201ENST00000366423 333 ntBASIC9.01□□□□□ -0.97
TRIM35Q9UPQ4 Y_RNA.562-201ENST00000384695 113 ntBASIC9.01□□□□□ -0.97
TRIM35Q9UPQ4 LDHAP5-201ENST00000394996 622 ntBASIC9.01□□□□□ -0.97
TRIM35Q9UPQ4 SNORA11C-201ENST00000408532 129 ntBASIC9.01□□□□□ -0.97
TRIM35Q9UPQ4 RN7SKP271-201ENST00000410528 320 ntBASIC9.01□□□□□ -0.97
TRIM35Q9UPQ4 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC9.01□□□□□ -0.97
TRIM35Q9UPQ4 AC008753.1-201ENST00000423096 284 ntBASIC9.01□□□□□ -0.97
TRIM35Q9UPQ4 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC9.01□□□□□ -0.97
TRIM35Q9UPQ4 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC9.01□□□□□ -0.97
TRIM35Q9UPQ4 FTH1P10-202ENST00000430907 550 ntBASIC9.01□□□□□ -0.97
TRIM35Q9UPQ4 MTCO3P29-201ENST00000432119 779 ntBASIC9.01□□□□□ -0.97
TRIM35Q9UPQ4 RPL23AP30-201ENST00000432419 501 ntBASIC9.01□□□□□ -0.97
TRIM35Q9UPQ4 AC003989.1-201ENST00000434569 565 ntBASIC9.01□□□□□ -0.97
TRIM35Q9UPQ4 RPL23AP28-201ENST00000448062 470 ntBASIC9.01□□□□□ -0.97
TRIM35Q9UPQ4 AL359091.1-201ENST00000449048 1734 ntBASIC9.01□□□□□ -0.97
TRIM35Q9UPQ4 MTND4LP30-201ENST00000454092 297 ntBASIC9.01□□□□□ -0.97
TRIM35Q9UPQ4 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC9.01□□□□□ -0.97
TRIM35Q9UPQ4 RN7SL372P-201ENST00000461982 298 ntBASIC9.01□□□□□ -0.97
TRIM35Q9UPQ4 RPL39P38-201ENST00000467018 153 ntBASIC9.01□□□□□ -0.97
TRIM35Q9UPQ4 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
TRIM35Q9UPQ4 AC008638.1-201ENST00000506035 866 ntBASIC9.01□□□□□ -0.97
TRIM35Q9UPQ4 CTSLP2-201ENST00000580501 394 ntBASIC9.01□□□□□ -0.97
TRIM35Q9UPQ4 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC9.01□□□□□ -0.97
TRIM35Q9UPQ4 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC9.01□□□□□ -0.97
TRIM35Q9UPQ4 AC006557.5-201ENST00000603126 811 ntBASIC9.01□□□□□ -0.97
TRIM35Q9UPQ4 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC9.01□□□□□ -0.97
TRIM35Q9UPQ4 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC9.01□□□□□ -0.97
TRIM35Q9UPQ4 MIR193BHG-214ENST00000641765 509 ntBASIC9.01□□□□□ -0.97
TRIM35Q9UPQ4 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
TRIM35Q9UPQ4 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
TRIM35Q9UPQ4 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
TRIM35Q9UPQ4 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
TRIM35Q9UPQ4 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
TRIM35Q9UPQ4 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
TRIM35Q9UPQ4 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC9.01□□□□□ -0.97
TRIM35Q9UPQ4 UNC79-206ENST00000621021 7377 ntAPPRIS P2 TSL 5 BASIC9.01□□□□□ -0.97
TRIM35Q9UPQ4 OSBPL9P1-201ENST00000604744 1469 ntBASIC9.01□□□□□ -0.97
TRIM35Q9UPQ4 XIST-206ENST00000434839 2865 ntTSL 5 BASIC9.01□□□□□ -0.97
TRIM35Q9UPQ4 OR11H5P-202ENST00000641612 1325 ntBASIC9.01□□□□□ -0.97
TRIM35Q9UPQ4 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
TRIM35Q9UPQ4 TCL6-201ENST00000352367 3398 ntTSL 2 BASIC9.01□□□□□ -0.97
TRIM35Q9UPQ4 TTC3P1-201ENST00000399586 6081 ntBASIC9□□□□□ -0.97
TRIM35Q9UPQ4 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC9□□□□□ -0.97
TRIM35Q9UPQ4 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
TRIM35Q9UPQ4 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC9□□□□□ -0.97
TRIM35Q9UPQ4 FGF9-201ENST00000382353 4220 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
TRIM35Q9UPQ4 ATM-215ENST00000530958 5718 ntTSL 2 BASIC9□□□□□ -0.97
TRIM35Q9UPQ4 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC9□□□□□ -0.97
TRIM35Q9UPQ4 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
TRIM35Q9UPQ4 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC9□□□□□ -0.97
TRIM35Q9UPQ4 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
TRIM35Q9UPQ4 BX322650.1-201ENST00000332359 2143 ntBASIC9□□□□□ -0.97
TRIM35Q9UPQ4 PARN-201ENST00000341484 2100 ntTSL 2 BASIC9□□□□□ -0.97
TRIM35Q9UPQ4 OR10D1P-201ENST00000355343 936 ntBASIC9□□□□□ -0.97
TRIM35Q9UPQ4 Y_RNA.29-201ENST00000362570 113 ntBASIC9□□□□□ -0.97
TRIM35Q9UPQ4 RN7SKP130-201ENST00000364924 301 ntBASIC9□□□□□ -0.97
TRIM35Q9UPQ4 SNORA75B-201ENST00000384053 137 ntBASIC9□□□□□ -0.97
TRIM35Q9UPQ4 MIR1-2-201ENST00000384961 85 ntBASIC9□□□□□ -0.97
TRIM35Q9UPQ4 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC9□□□□□ -0.97
TRIM35Q9UPQ4 AL096800.1-201ENST00000405326 893 ntBASIC9□□□□□ -0.97
TRIM35Q9UPQ4 MIR1302-6-201ENST00000408466 90 ntBASIC9□□□□□ -0.97
TRIM35Q9UPQ4 AL139396.1-201ENST00000421137 167 ntBASIC9□□□□□ -0.97
TRIM35Q9UPQ4 EIF4EP1-201ENST00000422311 642 ntBASIC9□□□□□ -0.97
TRIM35Q9UPQ4 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC9□□□□□ -0.97
TRIM35Q9UPQ4 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC9□□□□□ -0.97
TRIM35Q9UPQ4 TRBV29OR9-2-201ENST00000427589 333 ntBASIC9□□□□□ -0.97
TRIM35Q9UPQ4 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC9□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms