Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
VTA1Q9NP79 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
VTA1Q9NP79 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.96□□□□□ -1.46
VTA1Q9NP79 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
VTA1Q9NP79 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
VTA1Q9NP79 RN7SKP115-201ENST00000363177 317 ntBASIC5.96□□□□□ -1.46
VTA1Q9NP79 SNORD116.1-201ENST00000365628 92 ntBASIC5.96□□□□□ -1.46
VTA1Q9NP79 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC5.96□□□□□ -1.46
VTA1Q9NP79 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
VTA1Q9NP79 SNORA51.12-201ENST00000384448 134 ntBASIC5.96□□□□□ -1.46
VTA1Q9NP79 AL078599.1-201ENST00000402075 293 ntBASIC5.96□□□□□ -1.46
VTA1Q9NP79 SFR1P1-201ENST00000403720 688 ntBASIC5.96□□□□□ -1.46
VTA1Q9NP79 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
VTA1Q9NP79 DDX39BP1-205ENST00000422507 192 ntBASIC5.96□□□□□ -1.46
VTA1Q9NP79 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.96□□□□□ -1.46
VTA1Q9NP79 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.96□□□□□ -1.46
VTA1Q9NP79 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.96□□□□□ -1.46
VTA1Q9NP79 MTCO1P3-201ENST00000429327 192 ntBASIC5.96□□□□□ -1.46
VTA1Q9NP79 FABP7P2-201ENST00000429946 379 ntBASIC5.96□□□□□ -1.46
VTA1Q9NP79 AL365396.1-201ENST00000430854 671 ntBASIC5.96□□□□□ -1.46
VTA1Q9NP79 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.96□□□□□ -1.46
VTA1Q9NP79 RPL21P110-201ENST00000433345 446 ntBASIC5.96□□□□□ -1.46
VTA1Q9NP79 AC073465.2-201ENST00000440938 498 ntBASIC5.96□□□□□ -1.46
VTA1Q9NP79 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.96□□□□□ -1.46
VTA1Q9NP79 AL035551.1-201ENST00000446931 348 ntBASIC5.96□□□□□ -1.46
VTA1Q9NP79 AC104978.1-201ENST00000449387 391 ntBASIC5.96□□□□□ -1.46
VTA1Q9NP79 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.96□□□□□ -1.46
VTA1Q9NP79 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC5.96□□□□□ -1.46
VTA1Q9NP79 AC011979.1-201ENST00000472300 483 ntBASIC5.96□□□□□ -1.46
VTA1Q9NP79 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
VTA1Q9NP79 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.96□□□□□ -1.46
VTA1Q9NP79 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC5.96□□□□□ -1.46
VTA1Q9NP79 MTND1P22-201ENST00000510572 951 ntBASIC5.96□□□□□ -1.46
VTA1Q9NP79 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.96□□□□□ -1.46
VTA1Q9NP79 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.96□□□□□ -1.46
VTA1Q9NP79 MTND2P26-201ENST00000528255 1029 ntBASIC5.96□□□□□ -1.46
VTA1Q9NP79 BRD9P1-201ENST00000529855 560 ntBASIC5.96□□□□□ -1.46
VTA1Q9NP79 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC5.96□□□□□ -1.46
VTA1Q9NP79 AC010198.2-201ENST00000550612 259 ntBASIC5.96□□□□□ -1.46
VTA1Q9NP79 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC5.96□□□□□ -1.46
VTA1Q9NP79 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.96□□□□□ -1.46
VTA1Q9NP79 AC104785.1-201ENST00000603220 588 ntBASIC5.96□□□□□ -1.46
VTA1Q9NP79 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.96□□□□□ -1.46
VTA1Q9NP79 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC5.96□□□□□ -1.46
VTA1Q9NP79 AC009027.1-201ENST00000604510 479 ntBASIC5.96□□□□□ -1.46
VTA1Q9NP79 AC005084.1-201ENST00000605160 304 ntBASIC5.96□□□□□ -1.46
VTA1Q9NP79 AC080013.6-201ENST00000606185 215 ntBASIC5.96□□□□□ -1.46
VTA1Q9NP79 AP000255.1-201ENST00000610276 676 ntBASIC5.96□□□□□ -1.46
VTA1Q9NP79 EIF3FP1-201ENST00000613970 806 ntBASIC5.96□□□□□ -1.46
VTA1Q9NP79 RNA5SP439-201ENST00000617595 124 ntBASIC5.96□□□□□ -1.46
VTA1Q9NP79 AC007490.1-201ENST00000624321 703 ntBASIC5.96□□□□□ -1.46
VTA1Q9NP79 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC5.96□□□□□ -1.46
VTA1Q9NP79 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.96□□□□□ -1.46
VTA1Q9NP79 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
VTA1Q9NP79 RBPJP2-201ENST00000618187 1444 ntBASIC5.96□□□□□ -1.46
VTA1Q9NP79 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
VTA1Q9NP79 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
VTA1Q9NP79 AL034549.2-201ENST00000618285 3373 ntBASIC5.96□□□□□ -1.46
VTA1Q9NP79 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
VTA1Q9NP79 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.96□□□□□ -1.46
VTA1Q9NP79 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
VTA1Q9NP79 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
VTA1Q9NP79 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
VTA1Q9NP79 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
VTA1Q9NP79 INTS6P1-201ENST00000504674 2530 ntBASIC5.95□□□□□ -1.46
VTA1Q9NP79 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
VTA1Q9NP79 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
VTA1Q9NP79 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
VTA1Q9NP79 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
VTA1Q9NP79 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.95□□□□□ -1.46
VTA1Q9NP79 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
VTA1Q9NP79 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
VTA1Q9NP79 RNA5SP123-201ENST00000363244 119 ntBASIC5.95□□□□□ -1.46
VTA1Q9NP79 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC5.95□□□□□ -1.46
VTA1Q9NP79 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.95□□□□□ -1.46
VTA1Q9NP79 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC5.95□□□□□ -1.46
VTA1Q9NP79 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC5.95□□□□□ -1.46
VTA1Q9NP79 AC090960.1-201ENST00000421072 306 ntBASIC5.95□□□□□ -1.46
VTA1Q9NP79 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
VTA1Q9NP79 EI24P4-201ENST00000423683 1078 ntBASIC5.95□□□□□ -1.46
VTA1Q9NP79 MTCO3P21-201ENST00000430791 643 ntBASIC5.95□□□□□ -1.46
VTA1Q9NP79 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.95□□□□□ -1.46
VTA1Q9NP79 UBE2D3P1-201ENST00000436669 444 ntBASIC5.95□□□□□ -1.46
VTA1Q9NP79 AC073648.4-201ENST00000442655 781 ntBASIC5.95□□□□□ -1.46
VTA1Q9NP79 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.95□□□□□ -1.46
VTA1Q9NP79 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC5.95□□□□□ -1.46
VTA1Q9NP79 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC5.95□□□□□ -1.46
VTA1Q9NP79 MRPS33P3-201ENST00000513456 322 ntBASIC5.95□□□□□ -1.46
VTA1Q9NP79 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC5.95□□□□□ -1.46
VTA1Q9NP79 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC5.95□□□□□ -1.46
VTA1Q9NP79 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.95□□□□□ -1.46
VTA1Q9NP79 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC5.95□□□□□ -1.46
VTA1Q9NP79 IGJP1-201ENST00000522682 475 ntBASIC5.95□□□□□ -1.46
VTA1Q9NP79 PDCL2P2-201ENST00000533651 189 ntBASIC5.95□□□□□ -1.46
VTA1Q9NP79 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
VTA1Q9NP79 AC006206.1-201ENST00000544842 3387 ntBASIC5.95□□□□□ -1.46
VTA1Q9NP79 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC5.95□□□□□ -1.46
VTA1Q9NP79 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.95□□□□□ -1.46
VTA1Q9NP79 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.95□□□□□ -1.46
VTA1Q9NP79 MIR3934-201ENST00000579806 107 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms