Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CHD8Q9HCK8 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
CHD8Q9HCK8 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.04□□□□□ -1.76
CHD8Q9HCK8 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CHD8Q9HCK8 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CHD8Q9HCK8 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
CHD8Q9HCK8 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CHD8Q9HCK8 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC4.04□□□□□ -1.76
CHD8Q9HCK8 AC112198.2-201ENST00000426589 6996 ntBASIC4.04□□□□□ -1.76
CHD8Q9HCK8 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
CHD8Q9HCK8 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CHD8Q9HCK8 VN1R37P-201ENST00000419096 748 ntBASIC4.04□□□□□ -1.76
CHD8Q9HCK8 ARAFP1-201ENST00000422172 605 ntBASIC4.04□□□□□ -1.76
CHD8Q9HCK8 NPM1P26-201ENST00000426339 738 ntBASIC4.04□□□□□ -1.76
CHD8Q9HCK8 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.04□□□□□ -1.76
CHD8Q9HCK8 AC114495.1-201ENST00000441274 436 ntBASIC4.04□□□□□ -1.76
CHD8Q9HCK8 PRDX3P3-201ENST00000447765 522 ntBASIC4.04□□□□□ -1.76
CHD8Q9HCK8 AL451050.1-201ENST00000450126 415 ntBASIC4.04□□□□□ -1.76
CHD8Q9HCK8 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.04□□□□□ -1.76
CHD8Q9HCK8 RN7SL809P-201ENST00000482040 297 ntBASIC4.04□□□□□ -1.76
CHD8Q9HCK8 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.04□□□□□ -1.76
CHD8Q9HCK8 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.04□□□□□ -1.76
CHD8Q9HCK8 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.04□□□□□ -1.76
CHD8Q9HCK8 MIR4301-201ENST00000577203 66 ntBASIC4.04□□□□□ -1.76
CHD8Q9HCK8 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CHD8Q9HCK8 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CHD8Q9HCK8 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CHD8Q9HCK8 AL591135.1-201ENST00000401578 5914 ntBASIC4.03□□□□□ -1.76
CHD8Q9HCK8 AC004656.1-201ENST00000568479 4951 ntBASIC4.03□□□□□ -1.76
CHD8Q9HCK8 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CHD8Q9HCK8 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CHD8Q9HCK8 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.03□□□□□ -1.76
CHD8Q9HCK8 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CHD8Q9HCK8 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CHD8Q9HCK8 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.03□□□□□ -1.76
CHD8Q9HCK8 AL157831.1-201ENST00000426134 473 ntBASIC4.03□□□□□ -1.76
CHD8Q9HCK8 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.03□□□□□ -1.76
CHD8Q9HCK8 AL139099.1-201ENST00000497398 403 ntBASIC4.03□□□□□ -1.76
CHD8Q9HCK8 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.03□□□□□ -1.76
CHD8Q9HCK8 HIGD1AP18-201ENST00000520730 278 ntBASIC4.03□□□□□ -1.76
CHD8Q9HCK8 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.03□□□□□ -1.76
CHD8Q9HCK8 AL592436.1-201ENST00000605135 558 ntBASIC4.03□□□□□ -1.76
CHD8Q9HCK8 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.03□□□□□ -1.76
CHD8Q9HCK8 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CHD8Q9HCK8 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.03□□□□□ -1.76
CHD8Q9HCK8 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CHD8Q9HCK8 PRO1804-201ENST00000623780 2050 ntBASIC4.03□□□□□ -1.76
CHD8Q9HCK8 ZFRP1-201ENST00000457579 2970 ntBASIC4.03□□□□□ -1.76
CHD8Q9HCK8 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.03□□□□□ -1.76
CHD8Q9HCK8 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CHD8Q9HCK8 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CHD8Q9HCK8 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.03□□□□□ -1.76
CHD8Q9HCK8 RNU1-14P-201ENST00000362759 152 ntBASIC4.03□□□□□ -1.77
CHD8Q9HCK8 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.03□□□□□ -1.77
CHD8Q9HCK8 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.03□□□□□ -1.77
CHD8Q9HCK8 RN7SKP31-201ENST00000516354 278 ntBASIC4.03□□□□□ -1.77
CHD8Q9HCK8 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.03□□□□□ -1.77
CHD8Q9HCK8 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
CHD8Q9HCK8 MIR4524B-201ENST00000581569 115 ntBASIC4.03□□□□□ -1.77
CHD8Q9HCK8 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.03□□□□□ -1.77
CHD8Q9HCK8 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
CHD8Q9HCK8 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC4.03□□□□□ -1.77
CHD8Q9HCK8 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.03□□□□□ -1.77
CHD8Q9HCK8 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
CHD8Q9HCK8 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
CHD8Q9HCK8 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.02□□□□□ -1.77
CHD8Q9HCK8 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CHD8Q9HCK8 AC021242.1-201ENST00000507315 2035 ntBASIC4.02□□□□□ -1.77
CHD8Q9HCK8 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC4.02□□□□□ -1.77
CHD8Q9HCK8 SNORA38.1-201ENST00000364172 131 ntBASIC4.02□□□□□ -1.77
CHD8Q9HCK8 RNA5SP36-201ENST00000410197 133 ntBASIC4.02□□□□□ -1.77
CHD8Q9HCK8 AL158156.1-201ENST00000422509 473 ntBASIC4.02□□□□□ -1.77
CHD8Q9HCK8 OR5BE1P-201ENST00000425977 939 ntBASIC4.02□□□□□ -1.77
CHD8Q9HCK8 AL359265.1-201ENST00000440296 795 ntBASIC4.02□□□□□ -1.77
CHD8Q9HCK8 AC110792.1-201ENST00000491826 472 ntBASIC4.02□□□□□ -1.77
CHD8Q9HCK8 RNA5SP519-201ENST00000516480 119 ntBASIC4.02□□□□□ -1.77
CHD8Q9HCK8 AC090181.2-201ENST00000602975 672 ntBASIC4.02□□□□□ -1.77
CHD8Q9HCK8 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.02□□□□□ -1.77
CHD8Q9HCK8 AL683813.2-201ENST00000605245 502 ntBASIC4.02□□□□□ -1.77
CHD8Q9HCK8 OR5BE1P-202ENST00000641168 1176 ntBASIC4.02□□□□□ -1.77
CHD8Q9HCK8 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CHD8Q9HCK8 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.02□□□□□ -1.77
CHD8Q9HCK8 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CHD8Q9HCK8 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CHD8Q9HCK8 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
CHD8Q9HCK8 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CHD8Q9HCK8 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CHD8Q9HCK8 SYF2P2-201ENST00000417620 583 ntBASIC4.02□□□□□ -1.77
CHD8Q9HCK8 RPEP2-201ENST00000432149 701 ntBASIC4.02□□□□□ -1.77
CHD8Q9HCK8 AL512326.1-201ENST00000443050 721 ntBASIC4.02□□□□□ -1.77
CHD8Q9HCK8 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.02□□□□□ -1.77
CHD8Q9HCK8 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.02□□□□□ -1.77
CHD8Q9HCK8 RPS20P4-201ENST00000461659 355 ntBASIC4.02□□□□□ -1.77
CHD8Q9HCK8 AC037198.2-201ENST00000478845 733 ntBASIC4.02□□□□□ -1.77
CHD8Q9HCK8 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
CHD8Q9HCK8 ATP1B1P1-201ENST00000509767 915 ntBASIC4.02□□□□□ -1.77
CHD8Q9HCK8 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.02□□□□□ -1.77
CHD8Q9HCK8 RNA5SP73-201ENST00000516744 108 ntBASIC4.02□□□□□ -1.77
CHD8Q9HCK8 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.02□□□□□ -1.77
CHD8Q9HCK8 AC079587.1-201ENST00000603846 277 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms