Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC5.29□□□□□ -1.56
USP29Q9HBJ7 AC011447.4-201ENST00000587562 111 ntBASIC5.29□□□□□ -1.56
USP29Q9HBJ7 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC5.29□□□□□ -1.56
USP29Q9HBJ7 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.29□□□□□ -1.56
USP29Q9HBJ7 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC5.29□□□□□ -1.56
USP29Q9HBJ7 AC104785.1-201ENST00000603220 588 ntBASIC5.29□□□□□ -1.56
USP29Q9HBJ7 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.29□□□□□ -1.56
USP29Q9HBJ7 AC090510.2-201ENST00000617465 629 ntBASIC5.29□□□□□ -1.56
USP29Q9HBJ7 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.29□□□□□ -1.56
USP29Q9HBJ7 AC073569.3-201ENST00000619055 682 ntBASIC5.29□□□□□ -1.56
USP29Q9HBJ7 BX005214.3-202ENST00000619809 325 ntBASIC5.29□□□□□ -1.56
USP29Q9HBJ7 AC090897.3-201ENST00000636973 1157 ntBASIC5.29□□□□□ -1.56
USP29Q9HBJ7 BX649567.1-201ENST00000642071 1134 ntBASIC5.29□□□□□ -1.56
USP29Q9HBJ7 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.29□□□□□ -1.56
USP29Q9HBJ7 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
USP29Q9HBJ7 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.29□□□□□ -1.56
USP29Q9HBJ7 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
USP29Q9HBJ7 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.29□□□□□ -1.56
USP29Q9HBJ7 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
USP29Q9HBJ7 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
USP29Q9HBJ7 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.28□□□□□ -1.56
USP29Q9HBJ7 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
USP29Q9HBJ7 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
USP29Q9HBJ7 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
USP29Q9HBJ7 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
USP29Q9HBJ7 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
USP29Q9HBJ7 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.28□□□□□ -1.56
USP29Q9HBJ7 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
USP29Q9HBJ7 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
USP29Q9HBJ7 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
USP29Q9HBJ7 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
USP29Q9HBJ7 AC013442.1-201ENST00000397347 228 ntBASIC5.28□□□□□ -1.56
USP29Q9HBJ7 ATP5F1P2-201ENST00000398143 760 ntBASIC5.28□□□□□ -1.56
USP29Q9HBJ7 AL035079.1-201ENST00000405210 287 ntBASIC5.28□□□□□ -1.56
USP29Q9HBJ7 HMGB1P13-201ENST00000406019 642 ntBASIC5.28□□□□□ -1.56
USP29Q9HBJ7 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.28□□□□□ -1.56
USP29Q9HBJ7 DUTP5-201ENST00000406790 469 ntBASIC5.28□□□□□ -1.56
USP29Q9HBJ7 RPS7P9-201ENST00000414704 586 ntBASIC5.28□□□□□ -1.56
USP29Q9HBJ7 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.28□□□□□ -1.56
USP29Q9HBJ7 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC5.28□□□□□ -1.56
USP29Q9HBJ7 RPS3AP37-201ENST00000419176 745 ntBASIC5.28□□□□□ -1.56
USP29Q9HBJ7 MTND5P25-201ENST00000430499 799 ntBASIC5.28□□□□□ -1.56
USP29Q9HBJ7 AC084290.1-201ENST00000434995 374 ntBASIC5.28□□□□□ -1.56
USP29Q9HBJ7 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.28□□□□□ -1.56
USP29Q9HBJ7 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.28□□□□□ -1.56
USP29Q9HBJ7 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.28□□□□□ -1.56
USP29Q9HBJ7 SETD6P1-201ENST00000444575 317 ntBASIC5.28□□□□□ -1.56
USP29Q9HBJ7 CYCSP24-201ENST00000445119 316 ntBASIC5.28□□□□□ -1.56
USP29Q9HBJ7 AL050341.1-201ENST00000447743 313 ntBASIC5.28□□□□□ -1.56
USP29Q9HBJ7 AL589880.1-201ENST00000448271 287 ntBASIC5.28□□□□□ -1.56
USP29Q9HBJ7 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.28□□□□□ -1.56
USP29Q9HBJ7 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC5.28□□□□□ -1.56
USP29Q9HBJ7 AC244505.3-201ENST00000454598 187 ntBASIC5.28□□□□□ -1.56
USP29Q9HBJ7 Z92846.1-201ENST00000456203 268 ntBASIC5.28□□□□□ -1.56
USP29Q9HBJ7 AC008837.1-201ENST00000511513 412 ntBASIC5.28□□□□□ -1.56
USP29Q9HBJ7 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.28□□□□□ -1.56
USP29Q9HBJ7 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC5.28□□□□□ -1.56
USP29Q9HBJ7 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC5.28□□□□□ -1.56
USP29Q9HBJ7 MTCO2P15-201ENST00000532655 656 ntBASIC5.28□□□□□ -1.56
USP29Q9HBJ7 AC006518.2-201ENST00000542513 940 ntBASIC5.28□□□□□ -1.56
USP29Q9HBJ7 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.28□□□□□ -1.56
USP29Q9HBJ7 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.28□□□□□ -1.56
USP29Q9HBJ7 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC5.28□□□□□ -1.56
USP29Q9HBJ7 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.28□□□□□ -1.56
USP29Q9HBJ7 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.28□□□□□ -1.56
USP29Q9HBJ7 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.28□□□□□ -1.56
USP29Q9HBJ7 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.28□□□□□ -1.56
USP29Q9HBJ7 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC5.28□□□□□ -1.56
USP29Q9HBJ7 AC092106.3-201ENST00000611308 722 ntBASIC5.28□□□□□ -1.56
USP29Q9HBJ7 AL138478.1-201ENST00000612252 832 ntBASIC5.28□□□□□ -1.56
USP29Q9HBJ7 AC010975.3-201ENST00000618727 978 ntBASIC5.28□□□□□ -1.56
USP29Q9HBJ7 AC024023.1-201ENST00000624530 922 ntBASIC5.28□□□□□ -1.56
USP29Q9HBJ7 AC135068.12-201ENST00000637370 931 ntBASIC5.28□□□□□ -1.56
USP29Q9HBJ7 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
USP29Q9HBJ7 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.28□□□□□ -1.56
USP29Q9HBJ7 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
USP29Q9HBJ7 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
USP29Q9HBJ7 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
USP29Q9HBJ7 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
USP29Q9HBJ7 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.28□□□□□ -1.56
USP29Q9HBJ7 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
USP29Q9HBJ7 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
USP29Q9HBJ7 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
USP29Q9HBJ7 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
USP29Q9HBJ7 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
USP29Q9HBJ7 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.27□□□□□ -1.57
USP29Q9HBJ7 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
USP29Q9HBJ7 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
USP29Q9HBJ7 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
USP29Q9HBJ7 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.27□□□□□ -1.57
USP29Q9HBJ7 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
USP29Q9HBJ7 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
USP29Q9HBJ7 RNU4-51P-201ENST00000364206 140 ntBASIC5.27□□□□□ -1.57
USP29Q9HBJ7 RNU1-43P-201ENST00000365052 165 ntBASIC5.27□□□□□ -1.57
USP29Q9HBJ7 Y_RNA.472-201ENST00000384322 102 ntBASIC5.27□□□□□ -1.57
USP29Q9HBJ7 RNU6-244P-201ENST00000391028 104 ntBASIC5.27□□□□□ -1.57
USP29Q9HBJ7 AL136310.1-201ENST00000404926 654 ntBASIC5.27□□□□□ -1.57
USP29Q9HBJ7 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.27□□□□□ -1.57
USP29Q9HBJ7 VN2R3P-201ENST00000422626 1412 ntBASIC5.27□□□□□ -1.57
USP29Q9HBJ7 OR6K4P-201ENST00000423179 955 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms