Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC28BQ9BUN5 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC28BQ9BUN5 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CCDC28BQ9BUN5 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CCDC28BQ9BUN5 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
CCDC28BQ9BUN5 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC28BQ9BUN5 RNU1-63P-201ENST00000383902 164 ntBASIC4.44□□□□□ -1.7
CCDC28BQ9BUN5 AC073464.3-201ENST00000422564 712 ntBASIC4.44□□□□□ -1.7
CCDC28BQ9BUN5 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC28BQ9BUN5 AC073335.1-201ENST00000427776 363 ntBASIC4.44□□□□□ -1.7
CCDC28BQ9BUN5 CDY14P-201ENST00000431260 1014 ntBASIC4.44□□□□□ -1.7
CCDC28BQ9BUN5 AP000936.3-201ENST00000438127 255 ntBASIC4.44□□□□□ -1.7
CCDC28BQ9BUN5 CDY12P-201ENST00000440679 1015 ntBASIC4.44□□□□□ -1.7
CCDC28BQ9BUN5 Z99127.2-201ENST00000441426 334 ntBASIC4.44□□□□□ -1.7
CCDC28BQ9BUN5 CDY13P-201ENST00000445813 1015 ntBASIC4.44□□□□□ -1.7
CCDC28BQ9BUN5 MTND2P25-201ENST00000449028 610 ntBASIC4.44□□□□□ -1.7
CCDC28BQ9BUN5 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.44□□□□□ -1.7
CCDC28BQ9BUN5 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.44□□□□□ -1.7
CCDC28BQ9BUN5 CDY23P-201ENST00000451661 1014 ntBASIC4.44□□□□□ -1.7
CCDC28BQ9BUN5 AC079841.1-201ENST00000481228 950 ntBASIC4.44□□□□□ -1.7
CCDC28BQ9BUN5 RN7SL205P-201ENST00000490174 284 ntBASIC4.44□□□□□ -1.7
CCDC28BQ9BUN5 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC28BQ9BUN5 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC28BQ9BUN5 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC28BQ9BUN5 GAPDHP56-201ENST00000506031 988 ntBASIC4.44□□□□□ -1.7
CCDC28BQ9BUN5 AC106806.2-201ENST00000509365 500 ntBASIC4.44□□□□□ -1.7
CCDC28BQ9BUN5 MORF4L1P3-201ENST00000525966 950 ntBASIC4.44□□□□□ -1.7
CCDC28BQ9BUN5 AP003049.1-201ENST00000529418 457 ntBASIC4.44□□□□□ -1.7
CCDC28BQ9BUN5 AC022832.1-201ENST00000530718 645 ntBASIC4.44□□□□□ -1.7
CCDC28BQ9BUN5 CR383656.14-201ENST00000551951 406 ntBASIC4.44□□□□□ -1.7
CCDC28BQ9BUN5 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC4.44□□□□□ -1.7
CCDC28BQ9BUN5 AL121839.1-201ENST00000556233 1185 ntBASIC4.44□□□□□ -1.7
CCDC28BQ9BUN5 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC28BQ9BUN5 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.44□□□□□ -1.7
CCDC28BQ9BUN5 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.44□□□□□ -1.7
CCDC28BQ9BUN5 AL671309.1-201ENST00000603750 544 ntBASIC4.44□□□□□ -1.7
CCDC28BQ9BUN5 AC067838.1-201ENST00000606064 577 ntBASIC4.44□□□□□ -1.7
CCDC28BQ9BUN5 AC092953.2-201ENST00000608000 699 ntBASIC4.44□□□□□ -1.7
CCDC28BQ9BUN5 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
CCDC28BQ9BUN5 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.44□□□□□ -1.7
CCDC28BQ9BUN5 DDX6P1-205ENST00000441966 1436 ntBASIC4.44□□□□□ -1.7
CCDC28BQ9BUN5 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC28BQ9BUN5 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
CCDC28BQ9BUN5 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC28BQ9BUN5 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC28BQ9BUN5 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC28BQ9BUN5 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC28BQ9BUN5 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC28BQ9BUN5 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
CCDC28BQ9BUN5 AC083899.2-201ENST00000423285 1376 ntBASIC4.43□□□□□ -1.7
CCDC28BQ9BUN5 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC28BQ9BUN5 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC28BQ9BUN5 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC28BQ9BUN5 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC28BQ9BUN5 RNU6-1263P-201ENST00000384601 106 ntBASIC4.43□□□□□ -1.7
CCDC28BQ9BUN5 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC28BQ9BUN5 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC28BQ9BUN5 AMD1P2-201ENST00000412936 992 ntBASIC4.43□□□□□ -1.7
CCDC28BQ9BUN5 AL357078.2-201ENST00000416486 427 ntBASIC4.43□□□□□ -1.7
CCDC28BQ9BUN5 RPS6P14-201ENST00000425165 719 ntBASIC4.43□□□□□ -1.7
CCDC28BQ9BUN5 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC28BQ9BUN5 AL590762.3-201ENST00000436372 640 ntBASIC4.43□□□□□ -1.7
CCDC28BQ9BUN5 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.43□□□□□ -1.7
CCDC28BQ9BUN5 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC28BQ9BUN5 VN1R48P-201ENST00000448149 1036 ntBASIC4.43□□□□□ -1.7
CCDC28BQ9BUN5 AC108463.1-201ENST00000450258 347 ntBASIC4.43□□□□□ -1.7
CCDC28BQ9BUN5 AL606490.1-201ENST00000452266 765 ntBASIC4.43□□□□□ -1.7
CCDC28BQ9BUN5 RPL23AP71-201ENST00000470966 469 ntBASIC4.43□□□□□ -1.7
CCDC28BQ9BUN5 RPS18P6-201ENST00000476880 458 ntBASIC4.43□□□□□ -1.7
CCDC28BQ9BUN5 BX284632.1-201ENST00000478218 541 ntBASIC4.43□□□□□ -1.7
CCDC28BQ9BUN5 SCARNA22-201ENST00000503991 125 ntBASIC4.43□□□□□ -1.7
CCDC28BQ9BUN5 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC28BQ9BUN5 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.43□□□□□ -1.7
CCDC28BQ9BUN5 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.43□□□□□ -1.7
CCDC28BQ9BUN5 snoU109.6-201ENST00000516831 118 ntBASIC4.43□□□□□ -1.7
CCDC28BQ9BUN5 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC28BQ9BUN5 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.43□□□□□ -1.7
CCDC28BQ9BUN5 OR4R2P-201ENST00000530815 597 ntBASIC4.43□□□□□ -1.7
CCDC28BQ9BUN5 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC28BQ9BUN5 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC28BQ9BUN5 AC008147.3-201ENST00000548666 354 ntBASIC4.43□□□□□ -1.7
CCDC28BQ9BUN5 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC28BQ9BUN5 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC28BQ9BUN5 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.43□□□□□ -1.7
CCDC28BQ9BUN5 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC28BQ9BUN5 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.43□□□□□ -1.7
CCDC28BQ9BUN5 ELOCP28-201ENST00000590044 317 ntBASIC4.43□□□□□ -1.7
CCDC28BQ9BUN5 AC020914.4-201ENST00000597690 277 ntBASIC4.43□□□□□ -1.7
CCDC28BQ9BUN5 AL133247.2-201ENST00000603236 482 ntBASIC4.43□□□□□ -1.7
CCDC28BQ9BUN5 AC103792.1-201ENST00000603591 919 ntBASIC4.43□□□□□ -1.7
CCDC28BQ9BUN5 AC016542.1-201ENST00000608259 493 ntBASIC4.43□□□□□ -1.7
CCDC28BQ9BUN5 AC135803.1-201ENST00000608748 565 ntBASIC4.43□□□□□ -1.7
CCDC28BQ9BUN5 MIR6778-201ENST00000617912 73 ntBASIC4.43□□□□□ -1.7
CCDC28BQ9BUN5 AL391262.2-201ENST00000622466 494 ntBASIC4.43□□□□□ -1.7
CCDC28BQ9BUN5 AC097372.4-201ENST00000625025 466 ntBASIC4.43□□□□□ -1.7
CCDC28BQ9BUN5 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC28BQ9BUN5 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC28BQ9BUN5 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC28BQ9BUN5 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.43□□□□□ -1.7
CCDC28BQ9BUN5 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms