Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NUP88Q99567 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NUP88Q99567 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NUP88Q99567 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NUP88Q99567 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.95□□□□□ -1.46
NUP88Q99567 OR52E6-202ENST00000379946 954 ntBASIC5.95□□□□□ -1.46
NUP88Q99567 RNU1-74P-201ENST00000384108 171 ntBASIC5.95□□□□□ -1.46
NUP88Q99567 RNU6-636P-201ENST00000384598 107 ntBASIC5.95□□□□□ -1.46
NUP88Q99567 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
NUP88Q99567 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NUP88Q99567 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
NUP88Q99567 Y_RNA.625-201ENST00000411256 107 ntBASIC5.95□□□□□ -1.46
NUP88Q99567 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.95□□□□□ -1.46
NUP88Q99567 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC5.95□□□□□ -1.46
NUP88Q99567 AC048351.1-201ENST00000420064 602 ntBASIC5.95□□□□□ -1.46
NUP88Q99567 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.95□□□□□ -1.46
NUP88Q99567 AC234064.1-201ENST00000436312 247 ntBASIC5.95□□□□□ -1.46
NUP88Q99567 AC006466.1-201ENST00000438721 289 ntBASIC5.95□□□□□ -1.46
NUP88Q99567 EEF1A1P39-201ENST00000440791 250 ntBASIC5.95□□□□□ -1.46
NUP88Q99567 AC016772.1-201ENST00000444170 1261 ntBASIC5.95□□□□□ -1.46
NUP88Q99567 KNOP1P3-201ENST00000446933 426 ntBASIC5.95□□□□□ -1.46
NUP88Q99567 AC090804.1-201ENST00000448870 490 ntBASIC5.95□□□□□ -1.46
NUP88Q99567 AC022431.1-201ENST00000450941 438 ntBASIC5.95□□□□□ -1.46
NUP88Q99567 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.95□□□□□ -1.46
NUP88Q99567 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.95□□□□□ -1.46
NUP88Q99567 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC5.95□□□□□ -1.46
NUP88Q99567 AC010350.1-201ENST00000504908 231 ntBASIC5.95□□□□□ -1.46
NUP88Q99567 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.95□□□□□ -1.46
NUP88Q99567 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC5.95□□□□□ -1.46
NUP88Q99567 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.95□□□□□ -1.46
NUP88Q99567 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC5.95□□□□□ -1.46
NUP88Q99567 AC098976.1-201ENST00000513014 541 ntBASIC5.95□□□□□ -1.46
NUP88Q99567 RNA5SP43-201ENST00000516559 110 ntBASIC5.95□□□□□ -1.46
NUP88Q99567 RN7SKP260-201ENST00000516907 149 ntBASIC5.95□□□□□ -1.46
NUP88Q99567 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.95□□□□□ -1.46
NUP88Q99567 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.95□□□□□ -1.46
NUP88Q99567 AC138832.1-201ENST00000522871 556 ntBASIC5.95□□□□□ -1.46
NUP88Q99567 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC5.95□□□□□ -1.46
NUP88Q99567 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC5.95□□□□□ -1.46
NUP88Q99567 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC5.95□□□□□ -1.46
NUP88Q99567 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC5.95□□□□□ -1.46
NUP88Q99567 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.95□□□□□ -1.46
NUP88Q99567 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.95□□□□□ -1.46
NUP88Q99567 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.95□□□□□ -1.46
NUP88Q99567 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.95□□□□□ -1.46
NUP88Q99567 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NUP88Q99567 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
NUP88Q99567 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC5.95□□□□□ -1.46
NUP88Q99567 AC074140.1-201ENST00000621617 208 ntBASIC5.95□□□□□ -1.46
NUP88Q99567 AC091932.2-201ENST00000623014 291 ntBASIC5.95□□□□□ -1.46
NUP88Q99567 AC112694.2-201ENST00000623697 768 ntBASIC5.95□□□□□ -1.46
NUP88Q99567 MUC2-202ENST00000613187 4845 ntBASIC5.95□□□□□ -1.46
NUP88Q99567 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NUP88Q99567 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NUP88Q99567 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.95□□□□□ -1.46
NUP88Q99567 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NUP88Q99567 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NUP88Q99567 AC068870.3-201ENST00000625077 2536 ntBASIC5.94□□□□□ -1.46
NUP88Q99567 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.94□□□□□ -1.46
NUP88Q99567 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
NUP88Q99567 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
NUP88Q99567 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.94□□□□□ -1.46
NUP88Q99567 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NUP88Q99567 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.94□□□□□ -1.46
NUP88Q99567 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NUP88Q99567 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
NUP88Q99567 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.94□□□□□ -1.46
NUP88Q99567 RNF6P1-201ENST00000444889 1784 ntBASIC5.94□□□□□ -1.46
NUP88Q99567 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.94□□□□□ -1.46
NUP88Q99567 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NUP88Q99567 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.94□□□□□ -1.46
NUP88Q99567 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.94□□□□□ -1.46
NUP88Q99567 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NUP88Q99567 RN7SKP153-201ENST00000365026 316 ntBASIC5.94□□□□□ -1.46
NUP88Q99567 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.94□□□□□ -1.46
NUP88Q99567 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NUP88Q99567 Y_RNA.472-201ENST00000384322 102 ntBASIC5.94□□□□□ -1.46
NUP88Q99567 RPL37P18-201ENST00000411602 243 ntBASIC5.94□□□□□ -1.46
NUP88Q99567 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC5.94□□□□□ -1.46
NUP88Q99567 COX6B1P1-201ENST00000415962 213 ntBASIC5.94□□□□□ -1.46
NUP88Q99567 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.94□□□□□ -1.46
NUP88Q99567 MGAT2P2-201ENST00000427194 797 ntBASIC5.94□□□□□ -1.46
NUP88Q99567 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC5.94□□□□□ -1.46
NUP88Q99567 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.94□□□□□ -1.46
NUP88Q99567 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.94□□□□□ -1.46
NUP88Q99567 AC090018.1-201ENST00000434369 367 ntBASIC5.94□□□□□ -1.46
NUP88Q99567 MTCYBP42-201ENST00000444653 1130 ntBASIC5.94□□□□□ -1.46
NUP88Q99567 TPTE2P6-202ENST00000445572 1007 ntBASIC5.94□□□□□ -1.46
NUP88Q99567 AL929288.2-201ENST00000446368 407 ntBASIC5.94□□□□□ -1.46
NUP88Q99567 Z73417.1-201ENST00000447373 778 ntBASIC5.94□□□□□ -1.46
NUP88Q99567 MTND1P31-201ENST00000449206 961 ntBASIC5.94□□□□□ -1.46
NUP88Q99567 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.94□□□□□ -1.46
NUP88Q99567 DNAJC19P8-201ENST00000452887 259 ntBASIC5.94□□□□□ -1.46
NUP88Q99567 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC5.94□□□□□ -1.46
NUP88Q99567 XACT-201ENST00000468762 497 ntTSL 5 BASIC5.94□□□□□ -1.46
NUP88Q99567 AC022133.1-201ENST00000490961 571 ntBASIC5.94□□□□□ -1.46
NUP88Q99567 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC5.94□□□□□ -1.46
NUP88Q99567 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.94□□□□□ -1.46
NUP88Q99567 MRPS33P2-201ENST00000507850 322 ntBASIC5.94□□□□□ -1.46
NUP88Q99567 COX6B1P5-201ENST00000509843 249 ntBASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms