Protein–RNA interactions for Protein: Q96QK1

VPS35, Vacuolar protein sorting-associated protein 35, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35Q96QK1 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.58□□□□□ -1.68
VPS35Q96QK1 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
VPS35Q96QK1 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
VPS35Q96QK1 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
VPS35Q96QK1 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
VPS35Q96QK1 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
VPS35Q96QK1 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
VPS35Q96QK1 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
VPS35Q96QK1 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
VPS35Q96QK1 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.57□□□□□ -1.68
VPS35Q96QK1 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.57□□□□□ -1.68
VPS35Q96QK1 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
VPS35Q96QK1 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
VPS35Q96QK1 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
VPS35Q96QK1 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
VPS35Q96QK1 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
VPS35Q96QK1 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
VPS35Q96QK1 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
VPS35Q96QK1 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.57□□□□□ -1.68
VPS35Q96QK1 RPS4XP9-201ENST00000405151 780 ntBASIC4.57□□□□□ -1.68
VPS35Q96QK1 AL160275.2-201ENST00000412010 394 ntBASIC4.57□□□□□ -1.68
VPS35Q96QK1 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.57□□□□□ -1.68
VPS35Q96QK1 AC009237.10-201ENST00000414112 510 ntBASIC4.57□□□□□ -1.68
VPS35Q96QK1 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.57□□□□□ -1.68
VPS35Q96QK1 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
VPS35Q96QK1 RPS26P2-201ENST00000440331 348 ntBASIC4.57□□□□□ -1.68
VPS35Q96QK1 AC011753.3-201ENST00000443436 406 ntBASIC4.57□□□□□ -1.68
VPS35Q96QK1 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.57□□□□□ -1.68
VPS35Q96QK1 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.57□□□□□ -1.68
VPS35Q96QK1 RPL7AP52-201ENST00000458096 790 ntBASIC4.57□□□□□ -1.68
VPS35Q96QK1 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.57□□□□□ -1.68
VPS35Q96QK1 CDH12P2-201ENST00000504393 298 ntBASIC4.57□□□□□ -1.68
VPS35Q96QK1 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.57□□□□□ -1.68
VPS35Q96QK1 AC016550.3-201ENST00000515706 767 ntBASIC4.57□□□□□ -1.68
VPS35Q96QK1 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.57□□□□□ -1.68
VPS35Q96QK1 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.57□□□□□ -1.68
VPS35Q96QK1 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.57□□□□□ -1.68
VPS35Q96QK1 GLRXP2-201ENST00000555594 321 ntBASIC4.57□□□□□ -1.68
VPS35Q96QK1 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.57□□□□□ -1.68
VPS35Q96QK1 MIR4700-201ENST00000578311 74 ntBASIC4.57□□□□□ -1.68
VPS35Q96QK1 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.57□□□□□ -1.68
VPS35Q96QK1 AC234771.5-201ENST00000600161 514 ntBASIC4.57□□□□□ -1.68
VPS35Q96QK1 AC104785.1-201ENST00000603220 588 ntBASIC4.57□□□□□ -1.68
VPS35Q96QK1 MIR7703-201ENST00000620784 77 ntBASIC4.57□□□□□ -1.68
VPS35Q96QK1 AL139254.3-201ENST00000641097 674 ntBASIC4.57□□□□□ -1.68
VPS35Q96QK1 AC093535.2-201ENST00000624769 2326 ntBASIC4.57□□□□□ -1.68
VPS35Q96QK1 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
VPS35Q96QK1 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
VPS35Q96QK1 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
VPS35Q96QK1 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
VPS35Q96QK1 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.57□□□□□ -1.68
VPS35Q96QK1 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.57□□□□□ -1.68
VPS35Q96QK1 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.57□□□□□ -1.68
VPS35Q96QK1 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
VPS35Q96QK1 AC108467.2-201ENST00000617640 1597 ntBASIC4.57□□□□□ -1.68
VPS35Q96QK1 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
VPS35Q96QK1 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.56□□□□□ -1.68
VPS35Q96QK1 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.56□□□□□ -1.68
VPS35Q96QK1 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
VPS35Q96QK1 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
VPS35Q96QK1 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VPS35Q96QK1 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.56□□□□□ -1.68
VPS35Q96QK1 AC108751.5-201ENST00000492880 1336 ntBASIC4.56□□□□□ -1.68
VPS35Q96QK1 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
VPS35Q96QK1 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VPS35Q96QK1 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
VPS35Q96QK1 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
VPS35Q96QK1 RNU6-31P-201ENST00000384388 108 ntBASIC4.56□□□□□ -1.68
VPS35Q96QK1 RNU6-225P-201ENST00000384613 103 ntBASIC4.56□□□□□ -1.68
VPS35Q96QK1 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VPS35Q96QK1 OR1F12-201ENST00000402365 945 ntBASIC4.56□□□□□ -1.68
VPS35Q96QK1 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.56□□□□□ -1.68
VPS35Q96QK1 RPL21P43-201ENST00000425440 472 ntBASIC4.56□□□□□ -1.68
VPS35Q96QK1 FABP7P2-201ENST00000429946 379 ntBASIC4.56□□□□□ -1.68
VPS35Q96QK1 NDUFA5P10-201ENST00000432147 357 ntBASIC4.56□□□□□ -1.68
VPS35Q96QK1 MRPS33P4-201ENST00000434892 317 ntBASIC4.56□□□□□ -1.68
VPS35Q96QK1 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.56□□□□□ -1.68
VPS35Q96QK1 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
VPS35Q96QK1 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
VPS35Q96QK1 AL935212.3-201ENST00000450729 284 ntBASIC4.56□□□□□ -1.68
VPS35Q96QK1 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.56□□□□□ -1.68
VPS35Q96QK1 AC108751.2-201ENST00000469993 231 ntBASIC4.56□□□□□ -1.68
VPS35Q96QK1 RN7SL809P-201ENST00000482040 297 ntBASIC4.56□□□□□ -1.68
VPS35Q96QK1 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.56□□□□□ -1.68
VPS35Q96QK1 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.56□□□□□ -1.68
VPS35Q96QK1 AC108471.1-201ENST00000513977 287 ntBASIC4.56□□□□□ -1.68
VPS35Q96QK1 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.56□□□□□ -1.68
VPS35Q96QK1 AC107918.3-201ENST00000533272 382 ntBASIC4.56□□□□□ -1.68
VPS35Q96QK1 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.56□□□□□ -1.68
VPS35Q96QK1 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.56□□□□□ -1.68
VPS35Q96QK1 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.56□□□□□ -1.68
VPS35Q96QK1 AC005520.3-201ENST00000602874 370 ntBASIC4.56□□□□□ -1.68
VPS35Q96QK1 RNF138P2-201ENST00000603490 592 ntBASIC4.56□□□□□ -1.68
VPS35Q96QK1 AC097505.1-201ENST00000610199 565 ntBASIC4.56□□□□□ -1.68
VPS35Q96QK1 AC009032.1-201ENST00000617574 431 ntBASIC4.56□□□□□ -1.68
VPS35Q96QK1 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
VPS35Q96QK1 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
VPS35Q96QK1 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.56□□□□□ -1.68
VPS35Q96QK1 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
VPS35Q96QK1 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms