Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
USP47Q96K76 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
USP47Q96K76 AC009237.10-201ENST00000414112 510 ntBASIC5.93□□□□□ -1.46
USP47Q96K76 AC073335.1-201ENST00000427776 363 ntBASIC5.93□□□□□ -1.46
USP47Q96K76 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC5.93□□□□□ -1.46
USP47Q96K76 HSFY6P-201ENST00000445573 403 ntBASIC5.93□□□□□ -1.46
USP47Q96K76 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC5.93□□□□□ -1.46
USP47Q96K76 AF213884.1-201ENST00000488102 463 ntBASIC5.93□□□□□ -1.46
USP47Q96K76 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.93□□□□□ -1.46
USP47Q96K76 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC5.93□□□□□ -1.46
USP47Q96K76 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC5.93□□□□□ -1.46
USP47Q96K76 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC5.93□□□□□ -1.46
USP47Q96K76 RN7SL600P-201ENST00000581811 299 ntBASIC5.93□□□□□ -1.46
USP47Q96K76 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC5.93□□□□□ -1.46
USP47Q96K76 SNX18P1Y-201ENST00000616231 511 ntBASIC5.93□□□□□ -1.46
USP47Q96K76 MIR8059-201ENST00000620427 81 ntBASIC5.93□□□□□ -1.46
USP47Q96K76 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.93□□□□□ -1.46
USP47Q96K76 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.93□□□□□ -1.46
USP47Q96K76 AC005261.4-201ENST00000600047 1385 ntBASIC5.93□□□□□ -1.46
USP47Q96K76 DDX18P4-201ENST00000511690 1966 ntBASIC5.93□□□□□ -1.46
USP47Q96K76 AC010300.1-201ENST00000600671 5134 ntBASIC5.93□□□□□ -1.46
USP47Q96K76 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
USP47Q96K76 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
USP47Q96K76 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
USP47Q96K76 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
USP47Q96K76 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
USP47Q96K76 AL022322.2-201ENST00000624072 20397 ntBASIC5.93□□□□□ -1.46
USP47Q96K76 AC104260.2-201ENST00000623551 3497 ntBASIC5.93□□□□□ -1.46
USP47Q96K76 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
USP47Q96K76 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
USP47Q96K76 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC5.93□□□□□ -1.46
USP47Q96K76 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
USP47Q96K76 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC5.93□□□□□ -1.46
USP47Q96K76 PDSS1P1-201ENST00000422953 1114 ntBASIC5.93□□□□□ -1.46
USP47Q96K76 AL132765.1-201ENST00000434165 553 ntBASIC5.93□□□□□ -1.46
USP47Q96K76 PSMC1P13-201ENST00000458195 985 ntBASIC5.93□□□□□ -1.46
USP47Q96K76 RPS29P19-201ENST00000479709 171 ntBASIC5.93□□□□□ -1.46
USP47Q96K76 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.93□□□□□ -1.46
USP47Q96K76 OR8R1P-201ENST00000543943 764 ntBASIC5.93□□□□□ -1.46
USP47Q96K76 AC022655.2-201ENST00000577280 318 ntBASIC5.93□□□□□ -1.46
USP47Q96K76 AC022916.3-201ENST00000592961 742 ntBASIC5.93□□□□□ -1.46
USP47Q96K76 AC064801.1-201ENST00000612025 407 ntBASIC5.93□□□□□ -1.46
USP47Q96K76 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.93□□□□□ -1.46
USP47Q96K76 AC063952.1-203ENST00000634410 658 ntBASIC5.93□□□□□ -1.46
USP47Q96K76 OR8B1P-202ENST00000641132 1178 ntBASIC5.93□□□□□ -1.46
USP47Q96K76 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
USP47Q96K76 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
USP47Q96K76 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
USP47Q96K76 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
USP47Q96K76 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.92□□□□□ -1.46
USP47Q96K76 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
USP47Q96K76 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.92□□□□□ -1.46
USP47Q96K76 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
USP47Q96K76 AL590806.1-201ENST00000415818 853 ntBASIC5.92□□□□□ -1.46
USP47Q96K76 RPS23P10-201ENST00000416185 486 ntBASIC5.92□□□□□ -1.46
USP47Q96K76 AL451062.2-201ENST00000427515 271 ntBASIC5.92□□□□□ -1.46
USP47Q96K76 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
USP47Q96K76 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.92□□□□□ -1.46
USP47Q96K76 RPS7P7-201ENST00000463499 571 ntBASIC5.92□□□□□ -1.46
USP47Q96K76 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.92□□□□□ -1.46
USP47Q96K76 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.92□□□□□ -1.46
USP47Q96K76 AC006130.2-201ENST00000586202 326 ntBASIC5.92□□□□□ -1.46
USP47Q96K76 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
USP47Q96K76 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.92□□□□□ -1.46
USP47Q96K76 DLEU1_1.1-201ENST00000618107 190 ntBASIC5.92□□□□□ -1.46
USP47Q96K76 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
USP47Q96K76 NR1H5P-201ENST00000452683 1377 ntBASIC5.92□□□□□ -1.46
USP47Q96K76 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
USP47Q96K76 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC5.91□□□□□ -1.46
USP47Q96K76 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.91□□□□□ -1.46
USP47Q96K76 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
USP47Q96K76 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.91□□□□□ -1.46
USP47Q96K76 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
USP47Q96K76 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
USP47Q96K76 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
USP47Q96K76 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
USP47Q96K76 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.91□□□□□ -1.46
USP47Q96K76 VPS35P1-201ENST00000563400 1518 ntBASIC5.91□□□□□ -1.46
USP47Q96K76 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
USP47Q96K76 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
USP47Q96K76 SPRR2C-201ENST00000290702 219 ntBASIC5.91□□□□□ -1.46
USP47Q96K76 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
USP47Q96K76 AL161631.1-201ENST00000417933 486 ntBASIC5.91□□□□□ -1.46
USP47Q96K76 RBMY1KP-201ENST00000423480 476 ntBASIC5.91□□□□□ -1.46
USP47Q96K76 RPL23AP38-201ENST00000423801 469 ntBASIC5.91□□□□□ -1.46
USP47Q96K76 MAPRE1P3-201ENST00000435438 796 ntBASIC5.91□□□□□ -1.46
USP47Q96K76 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.91□□□□□ -1.46
USP47Q96K76 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5.91□□□□□ -1.46
USP47Q96K76 KCTD9P2-201ENST00000512203 1013 ntBASIC5.91□□□□□ -1.46
USP47Q96K76 OR7E10P-201ENST00000526420 991 ntBASIC5.91□□□□□ -1.46
USP47Q96K76 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.91□□□□□ -1.46
USP47Q96K76 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC5.91□□□□□ -1.46
USP47Q96K76 AC007066.2-202ENST00000566531 914 ntBASIC5.91□□□□□ -1.46
USP47Q96K76 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.91□□□□□ -1.46
USP47Q96K76 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC5.91□□□□□ -1.46
USP47Q96K76 MIR7154-201ENST00000620673 73 ntBASIC5.91□□□□□ -1.46
USP47Q96K76 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
USP47Q96K76 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
USP47Q96K76 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.9□□□□□ -1.46
USP47Q96K76 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms