Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 AC011445.2-201ENST00000599274 173 ntBASIC3.28□□□□□ -1.88
NUP35Q8NFH5 AL096803.3-201ENST00000609032 532 ntBASIC3.28□□□□□ -1.88
NUP35Q8NFH5 AC015922.4-201ENST00000612568 690 ntBASIC3.28□□□□□ -1.88
NUP35Q8NFH5 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.28□□□□□ -1.88
NUP35Q8NFH5 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC3.28□□□□□ -1.88
NUP35Q8NFH5 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
NUP35Q8NFH5 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NUP35Q8NFH5 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NUP35Q8NFH5 CPHL1P-201ENST00000461341 3407 ntBASIC3.28□□□□□ -1.89
NUP35Q8NFH5 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.28□□□□□ -1.89
NUP35Q8NFH5 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
NUP35Q8NFH5 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
NUP35Q8NFH5 MARK2P15-201ENST00000432204 2186 ntBASIC3.27□□□□□ -1.89
NUP35Q8NFH5 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
NUP35Q8NFH5 FAM35DP-201ENST00000323387 2712 ntBASIC3.27□□□□□ -1.89
NUP35Q8NFH5 MTCO1P14-201ENST00000441695 1559 ntBASIC3.27□□□□□ -1.89
NUP35Q8NFH5 FAM3C2-201ENST00000312214 681 ntBASIC3.27□□□□□ -1.89
NUP35Q8NFH5 RNA5SP435-201ENST00000364044 108 ntBASIC3.27□□□□□ -1.89
NUP35Q8NFH5 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NUP35Q8NFH5 AL607077.1-201ENST00000401718 499 ntBASIC3.27□□□□□ -1.89
NUP35Q8NFH5 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC3.27□□□□□ -1.89
NUP35Q8NFH5 RPL23AP4-201ENST00000427757 463 ntBASIC3.27□□□□□ -1.89
NUP35Q8NFH5 AC073069.1-201ENST00000428657 441 ntBASIC3.27□□□□□ -1.89
NUP35Q8NFH5 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.27□□□□□ -1.89
NUP35Q8NFH5 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NUP35Q8NFH5 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NUP35Q8NFH5 AC245047.2-201ENST00000441060 530 ntBASIC3.27□□□□□ -1.89
NUP35Q8NFH5 AC239809.1-201ENST00000450470 217 ntBASIC3.27□□□□□ -1.89
NUP35Q8NFH5 RPL5P32-201ENST00000454085 879 ntBASIC3.27□□□□□ -1.89
NUP35Q8NFH5 AURKAPS2-201ENST00000454983 333 ntBASIC3.27□□□□□ -1.89
NUP35Q8NFH5 SNRPGP5-201ENST00000456003 220 ntBASIC3.27□□□□□ -1.89
NUP35Q8NFH5 RN7SL101P-201ENST00000496350 279 ntBASIC3.27□□□□□ -1.89
NUP35Q8NFH5 AC108145.1-201ENST00000503770 153 ntBASIC3.27□□□□□ -1.89
NUP35Q8NFH5 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC3.27□□□□□ -1.89
NUP35Q8NFH5 RPL7L1P4-201ENST00000513004 707 ntBASIC3.27□□□□□ -1.89
NUP35Q8NFH5 ATP5LP3-201ENST00000514223 304 ntBASIC3.27□□□□□ -1.89
NUP35Q8NFH5 RNU6-347P-201ENST00000516658 105 ntBASIC3.27□□□□□ -1.89
NUP35Q8NFH5 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC3.27□□□□□ -1.89
NUP35Q8NFH5 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC3.27□□□□□ -1.89
NUP35Q8NFH5 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC3.27□□□□□ -1.89
NUP35Q8NFH5 CARD16-203ENST00000525374 503 ntTSL 3 BASIC3.27□□□□□ -1.89
NUP35Q8NFH5 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC3.27□□□□□ -1.89
NUP35Q8NFH5 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC3.27□□□□□ -1.89
NUP35Q8NFH5 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NUP35Q8NFH5 NPM1P35-201ENST00000533043 868 ntBASIC3.27□□□□□ -1.89
NUP35Q8NFH5 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.27□□□□□ -1.89
NUP35Q8NFH5 AC004825.1-201ENST00000555068 586 ntBASIC3.27□□□□□ -1.89
NUP35Q8NFH5 OR11J2P-201ENST00000555298 907 ntBASIC3.27□□□□□ -1.89
NUP35Q8NFH5 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.27□□□□□ -1.89
NUP35Q8NFH5 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC3.27□□□□□ -1.89
NUP35Q8NFH5 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC3.27□□□□□ -1.89
NUP35Q8NFH5 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC3.27□□□□□ -1.89
NUP35Q8NFH5 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC3.27□□□□□ -1.89
NUP35Q8NFH5 AC093799.2-201ENST00000610062 578 ntBASIC3.27□□□□□ -1.89
NUP35Q8NFH5 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC3.27□□□□□ -1.89
NUP35Q8NFH5 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC3.27□□□□□ -1.89
NUP35Q8NFH5 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.27□□□□□ -1.89
NUP35Q8NFH5 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NUP35Q8NFH5 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NUP35Q8NFH5 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
NUP35Q8NFH5 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC3.27□□□□□ -1.89
NUP35Q8NFH5 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.27□□□□□ -1.89
NUP35Q8NFH5 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
NUP35Q8NFH5 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
NUP35Q8NFH5 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.27□□□□□ -1.89
NUP35Q8NFH5 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
NUP35Q8NFH5 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
NUP35Q8NFH5 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
NUP35Q8NFH5 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC3.26□□□□□ -1.89
NUP35Q8NFH5 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.26□□□□□ -1.89
NUP35Q8NFH5 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC3.26□□□□□ -1.89
NUP35Q8NFH5 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NUP35Q8NFH5 RNA5SP322-201ENST00000363617 119 ntBASIC3.26□□□□□ -1.89
NUP35Q8NFH5 RNU6-304P-201ENST00000364855 107 ntBASIC3.26□□□□□ -1.89
NUP35Q8NFH5 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC3.26□□□□□ -1.89
NUP35Q8NFH5 RNU1-89P-201ENST00000384592 164 ntBASIC3.26□□□□□ -1.89
NUP35Q8NFH5 SNORD66.1-201ENST00000391230 76 ntBASIC3.26□□□□□ -1.89
NUP35Q8NFH5 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
NUP35Q8NFH5 MAST4-207ENST00000407621 559 ntTSL 2 BASIC3.26□□□□□ -1.89
NUP35Q8NFH5 U3.36-201ENST00000408418 213 ntBASIC3.26□□□□□ -1.89
NUP35Q8NFH5 SNORA3C-201ENST00000408792 125 ntBASIC3.26□□□□□ -1.89
NUP35Q8NFH5 RPS20P14-201ENST00000412545 360 ntBASIC3.26□□□□□ -1.89
NUP35Q8NFH5 AP000534.2-201ENST00000412729 568 ntBASIC3.26□□□□□ -1.89
NUP35Q8NFH5 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC3.26□□□□□ -1.89
NUP35Q8NFH5 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NUP35Q8NFH5 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.26□□□□□ -1.89
NUP35Q8NFH5 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.26□□□□□ -1.89
NUP35Q8NFH5 AC140479.3-201ENST00000418944 1126 ntBASIC3.26□□□□□ -1.89
NUP35Q8NFH5 ARAFP1-201ENST00000422172 605 ntBASIC3.26□□□□□ -1.89
NUP35Q8NFH5 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC3.26□□□□□ -1.89
NUP35Q8NFH5 OR2B7P-201ENST00000429302 934 ntBASIC3.26□□□□□ -1.89
NUP35Q8NFH5 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.26□□□□□ -1.89
NUP35Q8NFH5 TPTE2P3-201ENST00000441562 1189 ntBASIC3.26□□□□□ -1.89
NUP35Q8NFH5 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.26□□□□□ -1.89
NUP35Q8NFH5 FAR2P1-206ENST00000449736 709 ntBASIC3.26□□□□□ -1.89
NUP35Q8NFH5 OR52Y1P-201ENST00000452418 828 ntBASIC3.26□□□□□ -1.89
NUP35Q8NFH5 RPL7AP52-201ENST00000458096 790 ntBASIC3.26□□□□□ -1.89
NUP35Q8NFH5 RN7SL172P-201ENST00000460535 303 ntBASIC3.26□□□□□ -1.89
NUP35Q8NFH5 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.26□□□□□ -1.89
NUP35Q8NFH5 RN7SL808P-201ENST00000496066 299 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms