Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC6.97□□□□□ -1.29
NPAS3Q8IXF0 AC099782.1-201ENST00000425889 474 ntBASIC6.97□□□□□ -1.29
NPAS3Q8IXF0 AL389925.1-201ENST00000432257 728 ntBASIC6.97□□□□□ -1.29
NPAS3Q8IXF0 RPS3AP52-201ENST00000435639 297 ntBASIC6.97□□□□□ -1.29
NPAS3Q8IXF0 BNIP3P2-201ENST00000441221 577 ntBASIC6.97□□□□□ -1.29
NPAS3Q8IXF0 AL390728.3-201ENST00000452704 270 ntBASIC6.97□□□□□ -1.29
NPAS3Q8IXF0 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.97□□□□□ -1.29
NPAS3Q8IXF0 AC108078.3-201ENST00000502633 489 ntBASIC6.97□□□□□ -1.29
NPAS3Q8IXF0 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
NPAS3Q8IXF0 AC048346.1-201ENST00000510247 144 ntBASIC6.97□□□□□ -1.29
NPAS3Q8IXF0 KCTD9P2-201ENST00000512203 1013 ntBASIC6.97□□□□□ -1.29
NPAS3Q8IXF0 NPM1P41-201ENST00000512920 831 ntBASIC6.97□□□□□ -1.29
NPAS3Q8IXF0 RNA5SP441-201ENST00000516809 88 ntBASIC6.97□□□□□ -1.29
NPAS3Q8IXF0 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
NPAS3Q8IXF0 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.97□□□□□ -1.29
NPAS3Q8IXF0 APOOP3-201ENST00000536787 586 ntBASIC6.97□□□□□ -1.29
NPAS3Q8IXF0 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.97□□□□□ -1.29
NPAS3Q8IXF0 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.97□□□□□ -1.29
NPAS3Q8IXF0 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC6.97□□□□□ -1.29
NPAS3Q8IXF0 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.97□□□□□ -1.29
NPAS3Q8IXF0 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC6.97□□□□□ -1.29
NPAS3Q8IXF0 MTCO3P23-201ENST00000561363 289 ntBASIC6.97□□□□□ -1.29
NPAS3Q8IXF0 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC6.97□□□□□ -1.29
NPAS3Q8IXF0 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC6.97□□□□□ -1.29
NPAS3Q8IXF0 AC115286.1-201ENST00000604298 434 ntBASIC6.97□□□□□ -1.29
NPAS3Q8IXF0 AC008966.2-201ENST00000606157 453 ntBASIC6.97□□□□□ -1.29
NPAS3Q8IXF0 AL451049.1-201ENST00000608672 497 ntBASIC6.97□□□□□ -1.29
NPAS3Q8IXF0 RN7SL261P-201ENST00000613441 282 ntBASIC6.97□□□□□ -1.29
NPAS3Q8IXF0 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC6.97□□□□□ -1.29
NPAS3Q8IXF0 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC6.97□□□□□ -1.29
NPAS3Q8IXF0 AL596275.2-203ENST00000641951 371 ntBASIC6.97□□□□□ -1.29
NPAS3Q8IXF0 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
NPAS3Q8IXF0 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC6.97□□□□□ -1.29
NPAS3Q8IXF0 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC6.97□□□□□ -1.29
NPAS3Q8IXF0 Z83820.1-201ENST00000456978 1499 ntBASIC6.97□□□□□ -1.29
NPAS3Q8IXF0 TMC3-AS1-206ENST00000612811 2726 ntBASIC6.97□□□□□ -1.29
NPAS3Q8IXF0 ASNSP3-201ENST00000451989 1306 ntBASIC6.97□□□□□ -1.29
NPAS3Q8IXF0 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.97□□□□□ -1.29
NPAS3Q8IXF0 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
NPAS3Q8IXF0 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
NPAS3Q8IXF0 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
NPAS3Q8IXF0 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
NPAS3Q8IXF0 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC6.97□□□□□ -1.29
NPAS3Q8IXF0 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC6.96□□□□□ -1.29
NPAS3Q8IXF0 SPATA31C2-201ENST00000324915 3777 ntBASIC6.96□□□□□ -1.29
NPAS3Q8IXF0 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC6.96□□□□□ -1.29
NPAS3Q8IXF0 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC6.96□□□□□ -1.29
NPAS3Q8IXF0 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
NPAS3Q8IXF0 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.96□□□□□ -1.29
NPAS3Q8IXF0 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
NPAS3Q8IXF0 CTAGE11P-201ENST00000451540 2353 ntBASIC6.96□□□□□ -1.29
NPAS3Q8IXF0 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
NPAS3Q8IXF0 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
NPAS3Q8IXF0 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
NPAS3Q8IXF0 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC6.96□□□□□ -1.3
NPAS3Q8IXF0 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
NPAS3Q8IXF0 PARN-201ENST00000341484 2100 ntTSL 2 BASIC6.96□□□□□ -1.3
NPAS3Q8IXF0 Y_RNA.512-201ENST00000384518 102 ntBASIC6.96□□□□□ -1.3
NPAS3Q8IXF0 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC6.96□□□□□ -1.3
NPAS3Q8IXF0 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC6.96□□□□□ -1.3
NPAS3Q8IXF0 ATP5A1P8-201ENST00000423669 1291 ntBASIC6.96□□□□□ -1.3
NPAS3Q8IXF0 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
NPAS3Q8IXF0 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.96□□□□□ -1.3
NPAS3Q8IXF0 EIF5AP4-201ENST00000441206 465 ntBASIC6.96□□□□□ -1.3
NPAS3Q8IXF0 CALM1P2-201ENST00000452941 448 ntBASIC6.96□□□□□ -1.3
NPAS3Q8IXF0 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC6.96□□□□□ -1.3
NPAS3Q8IXF0 RN7SL552P-201ENST00000462094 276 ntBASIC6.96□□□□□ -1.3
NPAS3Q8IXF0 RPL38P3-201ENST00000484463 213 ntBASIC6.96□□□□□ -1.3
NPAS3Q8IXF0 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.96□□□□□ -1.3
NPAS3Q8IXF0 RPS4XP23-201ENST00000487801 237 ntBASIC6.96□□□□□ -1.3
NPAS3Q8IXF0 AC025164.1-201ENST00000496249 478 ntBASIC6.96□□□□□ -1.3
NPAS3Q8IXF0 AC010350.1-201ENST00000504908 231 ntBASIC6.96□□□□□ -1.3
NPAS3Q8IXF0 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
NPAS3Q8IXF0 RNU6-943P-201ENST00000516960 98 ntBASIC6.96□□□□□ -1.3
NPAS3Q8IXF0 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
NPAS3Q8IXF0 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC6.96□□□□□ -1.3
NPAS3Q8IXF0 POLR2KP1-201ENST00000553226 168 ntBASIC6.96□□□□□ -1.3
NPAS3Q8IXF0 AL109766.1-201ENST00000555080 552 ntBASIC6.96□□□□□ -1.3
NPAS3Q8IXF0 AL845552.1-201ENST00000556820 323 ntBASIC6.96□□□□□ -1.3
NPAS3Q8IXF0 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC6.96□□□□□ -1.3
NPAS3Q8IXF0 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC6.96□□□□□ -1.3
NPAS3Q8IXF0 AC136618.2-201ENST00000575091 400 ntBASIC6.96□□□□□ -1.3
NPAS3Q8IXF0 AC110743.1-201ENST00000584870 478 ntBASIC6.96□□□□□ -1.3
NPAS3Q8IXF0 AC010463.3-201ENST00000594077 500 ntBASIC6.96□□□□□ -1.3
NPAS3Q8IXF0 AL596327.1-201ENST00000603629 213 ntBASIC6.96□□□□□ -1.3
NPAS3Q8IXF0 AC115621.1-201ENST00000604653 858 ntBASIC6.96□□□□□ -1.3
NPAS3Q8IXF0 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.96□□□□□ -1.3
NPAS3Q8IXF0 PRR13P7-201ENST00000605538 430 ntBASIC6.96□□□□□ -1.3
NPAS3Q8IXF0 AC091953.5-201ENST00000622919 233 ntBASIC6.96□□□□□ -1.3
NPAS3Q8IXF0 AC130448.2-201ENST00000624082 374 ntBASIC6.96□□□□□ -1.3
NPAS3Q8IXF0 AP001052.1-201ENST00000626421 99 ntBASIC6.96□□□□□ -1.3
NPAS3Q8IXF0 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC6.96□□□□□ -1.3
NPAS3Q8IXF0 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC6.96□□□□□ -1.3
NPAS3Q8IXF0 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.96□□□□□ -1.3
NPAS3Q8IXF0 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC6.96□□□□□ -1.3
NPAS3Q8IXF0 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC6.96□□□□□ -1.3
NPAS3Q8IXF0 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
NPAS3Q8IXF0 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
NPAS3Q8IXF0 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC6.96□□□□□ -1.3
NPAS3Q8IXF0 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms